RNA–Protein interactions for RNA: ENST00000551063.5

PRPF40B-211, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 4

Gene PRPF40B, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-211ENST00000551063 CCDC62Q6P9F0 684 aa17.73■□□□□ 0.43
PRPF40B-211ENST00000551063 USP17L6PQ6QN14 398 aa17.73■□□□□ 0.43
PRPF40B-211ENST00000551063 SEPT14Q6ZU15 432 aa17.73■□□□□ 0.43
PRPF40B-211ENST00000551063 OR6J1Q8NGC5 347 aa17.73■□□□□ 0.43
PRPF40B-211ENST00000551063 IL31RAQ8NI17 732 aa17.73■□□□□ 0.43
PRPF40B-211ENST00000551063 RNF26Q9BY78 433 aaPredicted RBP17.73■□□□□ 0.43
PRPF40B-211ENST00000551063 ELP1O95163 1332 aa17.72■□□□□ 0.43
PRPF40B-211ENST00000551063 STXBP3O00186 592 aa17.72■□□□□ 0.43
PRPF40B-211ENST00000551063 PRPF3O43395 683 aaKnown RBP17.72■□□□□ 0.43
PRPF40B-211ENST00000551063 STAM2O75886 525 aa17.72■□□□□ 0.43
PRPF40B-211ENST00000551063 CABYRO75952 493 aa17.72■□□□□ 0.43
PRPF40B-211ENST00000551063 ARIH2O95376 493 aa17.72■□□□□ 0.43
PRPF40B-211ENST00000551063 ASGR1P07306 291 aa17.72■□□□□ 0.43
PRPF40B-211ENST00000551063 MYCLP12524 364 aaPredicted RBP17.72■□□□□ 0.43
PRPF40B-211ENST00000551063 CPT1AP50416 773 aa17.72■□□□□ 0.43
PRPF40B-211ENST00000551063 IRX5P78411 483 aaPredicted RBP17.72■□□□□ 0.43
PRPF40B-211ENST00000551063 BEX3Q00994 111 aa17.72■□□□□ 0.43
PRPF40B-211ENST00000551063 AKAP17AQ02040 695 aaKnown RBP17.72■□□□□ 0.43
PRPF40B-211ENST00000551063 ANKRD1Q15327 319 aa17.72■□□□□ 0.43
PRPF40B-211ENST00000551063 TYW1BQ6NUM6 668 aa17.72■□□□□ 0.43
PRPF40B-211ENST00000551063 XRRA1Q6P2D8 792 aa17.72■□□□□ 0.43
PRPF40B-211ENST00000551063 GLT8D2Q9H1C3 349 aa17.72■□□□□ 0.43
PRPF40B-211ENST00000551063 SPDYE3A6NKU9 549 aa17.71■□□□□ 0.43
PRPF40B-211ENST00000551063 GH1P01241 217 aa17.71■□□□□ 0.43
PRPF40B-211ENST00000551063 SCG2P13521 617 aa17.71■□□□□ 0.43
PRPF40B-211ENST00000551063 PTGS1P23219 599 aa17.71■□□□□ 0.43
PRPF40B-211ENST00000551063 CCT2P78371 535 aaKnown RBP17.71■□□□□ 0.43
PRPF40B-211ENST00000551063 GNPTABQ3T906 1256 aa17.71■□□□□ 0.43
PRPF40B-211ENST00000551063 TRIM60Q495X7 471 aa17.71■□□□□ 0.43
PRPF40B-211ENST00000551063 BRDTQ58F21 947 aaPredicted RBP17.71■□□□□ 0.43
PRPF40B-211ENST00000551063 KCNV1Q6PIU1 500 aa17.71■□□□□ 0.43
PRPF40B-211ENST00000551063 CCDC12Q8WUD4 166 aaPredicted RBP17.71■□□□□ 0.43
PRPF40B-211ENST00000551063 RIC8AQ9NPQ8 531 aa17.71■□□□□ 0.43
PRPF40B-211ENST00000551063 ATP11BQ9Y2G3 1177 aa17.71■□□□□ 0.43
PRPF40B-211ENST00000551063 MRVI1Q9Y6F6 885 aa17.71■□□□□ 0.43
PRPF40B-211ENST00000551063 ESYT2A0FGR8 921 aa17.7■□□□□ 0.42
PRPF40B-211ENST00000551063 CPLX1O14810 134 aa17.7■□□□□ 0.42
PRPF40B-211ENST00000551063 RGS20O76081 388 aa17.7■□□□□ 0.42
PRPF40B-211ENST00000551063 MAGEA10P43363 369 aaPredicted RBP17.7■□□□□ 0.42
PRPF40B-211ENST00000551063 ADCY7P51828 1080 aa17.7■□□□□ 0.42
PRPF40B-211ENST00000551063 PCNX4Q63HM2 1172 aa17.7■□□□□ 0.42
PRPF40B-211ENST00000551063 CPLX2Q6PUV4 134 aaKnown RBP17.7■□□□□ 0.42
PRPF40B-211ENST00000551063 COPS5Q92905 334 aa17.7■□□□□ 0.42
PRPF40B-211ENST00000551063 PHKBQ93100 1093 aa17.7■□□□□ 0.42
PRPF40B-211ENST00000551063 INPP4AQ96PE3 977 aaPredicted RBP17.7■□□□□ 0.42
PRPF40B-211ENST00000551063 EHMT1Q9H9B1 1298 aa17.7■□□□□ 0.42
PRPF40B-211ENST00000551063 NCOA5Q9HCD5 579 aaKnown RBP17.7■□□□□ 0.42
PRPF40B-211ENST00000551063 POLR3EQ9NVU0 708 aa17.7■□□□□ 0.42
PRPF40B-211ENST00000551063 DDX41Q9UJV9 622 aaKnown RBP17.7■□□□□ 0.42
PRPF40B-211ENST00000551063 A0A0U1RQG5 324 aaPredicted RBP17.69■□□□□ 0.42
PRPF40B-211ENST00000551063 A6NJR5 290 aa17.69■□□□□ 0.42
PRPF40B-211ENST00000551063 TGFB3P10600 412 aa17.69■□□□□ 0.42
PRPF40B-211ENST00000551063 AP3B2Q13367 1082 aa17.69■□□□□ 0.42
PRPF40B-211ENST00000551063 PKN1Q16512 942 aa17.69■□□□□ 0.42
PRPF40B-211ENST00000551063 UBE2SQ16763 222 aa17.69■□□□□ 0.42
PRPF40B-211ENST00000551063 CXCL17Q6UXB2 119 aa17.69■□□□□ 0.42
PRPF40B-211ENST00000551063 TRIM22Q8IYM9 498 aa17.69■□□□□ 0.42
PRPF40B-211ENST00000551063 CCDC148Q8NFR7 591 aa17.69■□□□□ 0.42
PRPF40B-211ENST00000551063 EMID1Q96A84 441 aaPredicted RBP17.69■□□□□ 0.42
PRPF40B-211ENST00000551063 TOX2Q96NM4 488 aa17.69■□□□□ 0.42
PRPF40B-211ENST00000551063 SLC26A6Q9BXS9 759 aa17.69■□□□□ 0.42
PRPF40B-211ENST00000551063 SEZ6LQ9BYH1 1024 aa17.69■□□□□ 0.42
PRPF40B-211ENST00000551063 UBE2OQ9C0C9 1292 aaKnown RBP17.69■□□□□ 0.42
PRPF40B-211ENST00000551063 MROH7Q68CQ1 1323 aa17.69■□□□□ 0.42
PRPF40B-211ENST00000551063 SMCO2A6NFE2 343 aa17.68■□□□□ 0.42
PRPF40B-211ENST00000551063 SOX1O00570 391 aaPredicted RBP17.68■□□□□ 0.42
PRPF40B-211ENST00000551063 KPNA6O60684 536 aa17.68■□□□□ 0.42
PRPF40B-211ENST00000551063 FOSP01100 380 aaPredicted RBP17.68■□□□□ 0.42
PRPF40B-211ENST00000551063 ICAM3P32942 547 aa17.68■□□□□ 0.42
PRPF40B-211ENST00000551063 RANBP2P49792 3224 aaKnown RBP17.68■□□□□ 0.42
PRPF40B-211ENST00000551063 AK2P54819 239 aa17.68■□□□□ 0.42
PRPF40B-211ENST00000551063 MRPS9P82933 396 aaKnown RBP17.68■□□□□ 0.42
PRPF40B-211ENST00000551063 ARHGAP1Q07960 439 aa17.68■□□□□ 0.42
PRPF40B-211ENST00000551063 LY6KQ17RY6 165 aa17.68■□□□□ 0.42
PRPF40B-211ENST00000551063 GPR153Q6NV75 609 aa17.68■□□□□ 0.42
PRPF40B-211ENST00000551063 ANKRD33Q7Z3H0 272 aa17.68■□□□□ 0.42
PRPF40B-211ENST00000551063 TDHQ8IZJ6 230 aa17.68■□□□□ 0.42
PRPF40B-211ENST00000551063 PCDHA6Q9UN73 950 aa17.68■□□□□ 0.42
PRPF40B-211ENST00000551063 PCDHA8Q9Y5H6 950 aa17.68■□□□□ 0.42
PRPF40B-211ENST00000551063 ARVCFO00192 962 aa17.67■□□□□ 0.42
PRPF40B-211ENST00000551063 FIBPO43427 364 aa17.67■□□□□ 0.42
PRPF40B-211ENST00000551063 PFKFB2O60825 505 aa17.67■□□□□ 0.42
PRPF40B-211ENST00000551063 CDKL5O76039 1030 aa17.67■□□□□ 0.42
PRPF40B-211ENST00000551063 UBA1P22314 1058 aaKnown RBP17.67■□□□□ 0.42
PRPF40B-211ENST00000551063 PURAQ00577 322 aaKnown RBP17.67■□□□□ 0.42
PRPF40B-211ENST00000551063 TLE2Q04725 743 aa17.67■□□□□ 0.42
PRPF40B-211ENST00000551063 LAMC2Q13753 1193 aa17.67■□□□□ 0.42
PRPF40B-211ENST00000551063 LRIT3Q3SXY7 679 aa17.67■□□□□ 0.42
PRPF40B-211ENST00000551063 MCTP2Q6DN12 878 aa17.67■□□□□ 0.42
PRPF40B-211ENST00000551063 NLRX1Q86UT6 975 aa17.67■□□□□ 0.42
PRPF40B-211ENST00000551063 LRCH3Q96II8 777 aa17.67■□□□□ 0.42
PRPF40B-211ENST00000551063 LARP6Q9BRS8 491 aaKnown RBP17.67■□□□□ 0.42
PRPF40B-211ENST00000551063 ZMYND12Q9H0C1 365 aa17.67■□□□□ 0.42
PRPF40B-211ENST00000551063 SLKQ9H2G2 1235 aaPredicted RBP17.67■□□□□ 0.42
PRPF40B-211ENST00000551063 PDLIM7Q9NR12 457 aa17.67■□□□□ 0.42
PRPF40B-211ENST00000551063 PRKAG2Q9UGJ0 569 aa17.67■□□□□ 0.42
PRPF40B-211ENST00000551063 TPCN1Q9ULQ1 816 aa17.67■□□□□ 0.42
PRPF40B-211ENST00000551063 DEXIO95424 95 aa17.66■□□□□ 0.42
PRPF40B-211ENST00000551063 MMP3P08254 477 aa17.66■□□□□ 0.42
PRPF40B-211ENST00000551063 GNA11P29992 359 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms