RNA–Protein interactions for RNA: ENST00000550818.1

TSPAN8-205, Transcript of tetraspanin 8, humanhuman

TSL 1 (best)

Gene TSPAN8, Length 627 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN8-205ENST00000550818 RFPL3O75679 317 aa5.51□□□□□ -1.53
TSPAN8-205ENST00000550818 CPP00450 1065 aa5.51□□□□□ -1.53
TSPAN8-205ENST00000550818 SCG5P05408 212 aa5.51□□□□□ -1.53
TSPAN8-205ENST00000550818 BMP8BP34820 402 aa5.51□□□□□ -1.53
TSPAN8-205ENST00000550818 KCNC1P48547 511 aa5.51□□□□□ -1.53
TSPAN8-205ENST00000550818 MAP4K2Q12851 820 aa5.51□□□□□ -1.53
TSPAN8-205ENST00000550818 SF1Q15637 639 aaKnown RBP5.51□□□□□ -1.53
TSPAN8-205ENST00000550818 KCTD13Q8WZ19 329 aa5.51□□□□□ -1.53
TSPAN8-205ENST00000550818 MCMBPQ9BTE3 642 aa5.51□□□□□ -1.53
TSPAN8-205ENST00000550818 MRPL4Q9BYD3 311 aaKnown RBP5.51□□□□□ -1.53
TSPAN8-205ENST00000550818 TMX1Q9H3N1 280 aa5.51□□□□□ -1.53
TSPAN8-205ENST00000550818 SRRDQ9UH36 339 aa5.51□□□□□ -1.53
TSPAN8-205ENST00000550818 PLAAQ9Y263 795 aa5.51□□□□□ -1.53
TSPAN8-205ENST00000550818 PCDHA5Q9Y5H7 936 aa5.51□□□□□ -1.53
TSPAN8-205ENST00000550818 AURKAO14965 403 aa5.5□□□□□ -1.53
TSPAN8-205ENST00000550818 CD3EP07766 207 aa5.5□□□□□ -1.53
TSPAN8-205ENST00000550818 SNRPB2P08579 225 aaKnown RBP5.5□□□□□ -1.53
TSPAN8-205ENST00000550818 PNLIPP16233 465 aa5.5□□□□□ -1.53
TSPAN8-205ENST00000550818 ERVFRD-1P60508 538 aa5.5□□□□□ -1.53
TSPAN8-205ENST00000550818 ADAM17P78536 824 aa5.5□□□□□ -1.53
TSPAN8-205ENST00000550818 CYP4F3Q08477 520 aa5.5□□□□□ -1.53
TSPAN8-205ENST00000550818 CBX2Q14781 532 aaPredicted RBP5.5□□□□□ -1.53
TSPAN8-205ENST00000550818 DPY19L1Q2PZI1 675 aa5.5□□□□□ -1.53
TSPAN8-205ENST00000550818 FNDC3BQ53EP0 1204 aaKnown RBP5.5□□□□□ -1.53
TSPAN8-205ENST00000550818 DALRD3Q5D0E6 543 aaKnown RBP5.5□□□□□ -1.53
TSPAN8-205ENST00000550818 C1orf159Q96HA4 380 aa5.5□□□□□ -1.53
TSPAN8-205ENST00000550818 KLHL14Q9P2G3 628 aa5.5□□□□□ -1.53
TSPAN8-205ENST00000550818 STXBP3O00186 592 aa5.49□□□□□ -1.53
TSPAN8-205ENST00000550818 ABLIM1O14639 778 aa5.49□□□□□ -1.53
TSPAN8-205ENST00000550818 KCNQ2O43526 872 aa5.49□□□□□ -1.53
TSPAN8-205ENST00000550818 DNAJC6O75061 913 aa5.49□□□□□ -1.53
TSPAN8-205ENST00000550818 ZNF205O95201 554 aa5.49□□□□□ -1.53
TSPAN8-205ENST00000550818 RAPGEF3O95398 923 aa5.49□□□□□ -1.53
TSPAN8-205ENST00000550818 C6orf222P0C671 652 aaPredicted RBP5.49□□□□□ -1.53
TSPAN8-205ENST00000550818 VAV1P15498 845 aa5.49□□□□□ -1.53
TSPAN8-205ENST00000550818 ECI1P42126 302 aa5.49□□□□□ -1.53
TSPAN8-205ENST00000550818 NOP2P46087 812 aaKnown RBP5.49□□□□□ -1.53
TSPAN8-205ENST00000550818 KCNJ6P48051 423 aa5.49□□□□□ -1.53
TSPAN8-205ENST00000550818 SCRN1Q12765 414 aa5.49□□□□□ -1.53
TSPAN8-205ENST00000550818 PABPC4Q13310 644 aaKnown RBP eCLIP5.49□□□□□ -1.53
TSPAN8-205ENST00000550818 SLC14A2Q15849 920 aa5.49□□□□□ -1.53
TSPAN8-205ENST00000550818 TRIM61Q5EBN2 209 aa5.49□□□□□ -1.53
TSPAN8-205ENST00000550818 UBXN11Q5T124 520 aa5.49□□□□□ -1.53
TSPAN8-205ENST00000550818 SLC35F1Q5T1Q4 408 aa5.49□□□□□ -1.53
TSPAN8-205ENST00000550818 OLFML2BQ68BL8 750 aa5.49□□□□□ -1.53
TSPAN8-205ENST00000550818 FILIP1Q7Z7B0 1213 aa5.49□□□□□ -1.53
TSPAN8-205ENST00000550818 FERMT3Q86UX7 667 aa5.49□□□□□ -1.53
TSPAN8-205ENST00000550818 USHBP1Q8N6Y0 703 aa5.49□□□□□ -1.53
TSPAN8-205ENST00000550818 TMEM145Q8NBT3 493 aa5.49□□□□□ -1.53
TSPAN8-205ENST00000550818 LINC00116Q8NCU8 138 aa5.49□□□□□ -1.53
TSPAN8-205ENST00000550818 COPS5Q92905 334 aa5.49□□□□□ -1.53
TSPAN8-205ENST00000550818 NINJ1Q92982 152 aa5.49□□□□□ -1.53
TSPAN8-205ENST00000550818 MAP6Q96JE9 813 aa5.49□□□□□ -1.53
TSPAN8-205ENST00000550818 FCRL3Q96P31 734 aaPredicted RBP5.49□□□□□ -1.53
TSPAN8-205ENST00000550818 PLCD4Q9BRC7 762 aa5.49□□□□□ -1.53
TSPAN8-205ENST00000550818 SLC12A9Q9BXP2 914 aa5.49□□□□□ -1.53
TSPAN8-205ENST00000550818 SPC25Q9HBM1 224 aa5.49□□□□□ -1.53
TSPAN8-205ENST00000550818 IFT57Q9NWB7 429 aa5.49□□□□□ -1.53
TSPAN8-205ENST00000550818 BACE2Q9Y5Z0 518 aa5.49□□□□□ -1.53
TSPAN8-205ENST00000550818 SYPP08247 313 aa5.48□□□□□ -1.53
TSPAN8-205ENST00000550818 IFNGR1P15260 489 aa5.48□□□□□ -1.53
TSPAN8-205ENST00000550818 RPL10P27635 214 aaKnown RBP5.48□□□□□ -1.53
TSPAN8-205ENST00000550818 KIR2DL1P43626 348 aaPredicted RBP5.48□□□□□ -1.53
TSPAN8-205ENST00000550818 KIR2DL2P43627 348 aaPredicted RBP5.48□□□□□ -1.53
TSPAN8-205ENST00000550818 MASP1P48740 699 aa5.48□□□□□ -1.53
TSPAN8-205ENST00000550818 NCKAP1LP55160 1127 aa5.48□□□□□ -1.53
TSPAN8-205ENST00000550818 PCBP3P57721 371 aaKnown RBP5.48□□□□□ -1.53
TSPAN8-205ENST00000550818 GABREP78334 506 aa5.48□□□□□ -1.53
TSPAN8-205ENST00000550818 CAP1Q01518 475 aa5.48□□□□□ -1.53
TSPAN8-205ENST00000550818 NTRK3Q16288 839 aa5.48□□□□□ -1.53
TSPAN8-205ENST00000550818 C21orf62-AS1Q17RA5 79 aa5.48□□□□□ -1.53
TSPAN8-205ENST00000550818 PRSS53Q2L4Q9 553 aa5.48□□□□□ -1.53
TSPAN8-205ENST00000550818 CEP128Q6ZU80 1094 aa5.48□□□□□ -1.53
TSPAN8-205ENST00000550818 TMC6Q7Z403 805 aa5.48□□□□□ -1.53
TSPAN8-205ENST00000550818 NIM1KQ8IY84 436 aa5.48□□□□□ -1.53
TSPAN8-205ENST00000550818 KREMEN2Q8NCW0 462 aa5.48□□□□□ -1.53
TSPAN8-205ENST00000550818 MFSD3Q96ES6 412 aa5.48□□□□□ -1.53
TSPAN8-205ENST00000550818 CLUHP3Q96NS8 147 aa5.48□□□□□ -1.53
TSPAN8-205ENST00000550818 KRTAP3-1Q9BYR8 98 aa5.48□□□□□ -1.53
TSPAN8-205ENST00000550818 SCAND2PQ9GZW5 306 aaPredicted RBP5.48□□□□□ -1.53
TSPAN8-205ENST00000550818 TCFL5Q9UL49 500 aa5.48□□□□□ -1.53
TSPAN8-205ENST00000550818 C2orf71A6NGG8 1288 aa5.47□□□□□ -1.53
TSPAN8-205ENST00000550818 BUB1BO60566 1050 aaPredicted RBP5.47□□□□□ -1.53
TSPAN8-205ENST00000550818 THBDP07204 575 aa5.47□□□□□ -1.53
TSPAN8-205ENST00000550818 PTPROQ16827 1216 aa5.47□□□□□ -1.53
TSPAN8-205ENST00000550818 TM4SF20Q53R12 229 aa5.47□□□□□ -1.53
TSPAN8-205ENST00000550818 RTP2Q5QGT7 225 aa5.47□□□□□ -1.53
TSPAN8-205ENST00000550818 DENND5AQ6IQ26 1287 aa5.47□□□□□ -1.53
TSPAN8-205ENST00000550818 RCSD1Q6JBY9 416 aa5.47□□□□□ -1.53
TSPAN8-205ENST00000550818 RNF111Q6ZNA4 994 aa5.47□□□□□ -1.53
TSPAN8-205ENST00000550818 DHX37Q8IY37 1157 aaKnown RBP5.47□□□□□ -1.53
TSPAN8-205ENST00000550818 NPLOC4Q8TAT6 608 aa5.47□□□□□ -1.53
TSPAN8-205ENST00000550818 PTPRN2Q92932 1015 aa5.47□□□□□ -1.53
TSPAN8-205ENST00000550818 GPATCH3Q96I76 525 aa5.47□□□□□ -1.53
TSPAN8-205ENST00000550818 HHIPL1Q96JK4 782 aa5.47□□□□□ -1.53
TSPAN8-205ENST00000550818 FOXP3Q9BZS1 431 aa5.47□□□□□ -1.53
TSPAN8-205ENST00000550818 BRINP2Q9C0B6 783 aa5.47□□□□□ -1.53
TSPAN8-205ENST00000550818 SFMBT1Q9UHJ3 866 aa5.47□□□□□ -1.53
TSPAN8-205ENST00000550818 SSU72P8A0A1W2PR75 194 aa5.46□□□□□ -1.54
TSPAN8-205ENST00000550818 BLACEA4D250 179 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms