RNA–Protein interactions for RNA: ENST00000550659.1

PRDM4-206, Transcript of PR/SET domain 4, humanhuman

TSL 3

Gene PRDM4, Length 837 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-206ENST00000550659 SEMA6CQ9H3T2 930 aa7.49□□□□□ -1.21
PRDM4-206ENST00000550659 AKTIPQ9H8T0 292 aa7.49□□□□□ -1.21
PRDM4-206ENST00000550659 PRDM10Q9NQV6 1147 aa7.49□□□□□ -1.21
PRDM4-206ENST00000550659 MKL2Q9ULH7 1088 aa7.49□□□□□ -1.21
PRDM4-206ENST00000550659 DAGLAQ9Y4D2 1042 aa7.49□□□□□ -1.21
PRDM4-206ENST00000550659 PEAK1Q9H792 1746 aa7.49□□□□□ -1.21
PRDM4-206ENST00000550659 PNPLA6Q8IY17 1366 aa7.48□□□□□ -1.21
PRDM4-206ENST00000550659 SLIT3O75094 1523 aa7.48□□□□□ -1.21
PRDM4-206ENST00000550659 NFAT5O94916 1531 aa7.48□□□□□ -1.21
PRDM4-206ENST00000550659 KCNH1O95259 989 aa7.48□□□□□ -1.21
PRDM4-206ENST00000550659 NPTXRO95502 500 aa7.48□□□□□ -1.21
PRDM4-206ENST00000550659 HOXC12P31275 282 aa7.48□□□□□ -1.21
PRDM4-206ENST00000550659 CCDC184Q52MB2 194 aa7.48□□□□□ -1.21
PRDM4-206ENST00000550659 CDPF1Q6NVV7 123 aa7.48□□□□□ -1.21
PRDM4-206ENST00000550659 BRAPQ7Z569 592 aa7.48□□□□□ -1.21
PRDM4-206ENST00000550659 FIBCD1Q8N539 461 aa7.48□□□□□ -1.21
PRDM4-206ENST00000550659 PTPRN2Q92932 1015 aa7.48□□□□□ -1.21
PRDM4-206ENST00000550659 NKX2-4Q9H2Z4 354 aa7.48□□□□□ -1.21
PRDM4-206ENST00000550659 SLC52A2Q9HAB3 445 aa7.48□□□□□ -1.21
PRDM4-206ENST00000550659 NOP53Q9NZM5 478 aaKnown RBP7.48□□□□□ -1.21
PRDM4-206ENST00000550659 NDOR1Q9UHB4 597 aa7.48□□□□□ -1.21
PRDM4-206ENST00000550659 COL22A1Q8NFW1 1626 aaPredicted RBP7.48□□□□□ -1.21
PRDM4-206ENST00000550659 ASLP04424 464 aa7.47□□□□□ -1.21
PRDM4-206ENST00000550659 SCG5P05408 212 aa7.47□□□□□ -1.21
PRDM4-206ENST00000550659 CYP7A1P22680 504 aa7.47□□□□□ -1.21
PRDM4-206ENST00000550659 TNNT2P45379 298 aaPredicted RBP7.47□□□□□ -1.21
PRDM4-206ENST00000550659 LCE2CQ5TA81 110 aa7.47□□□□□ -1.21
PRDM4-206ENST00000550659 DDX46Q7L014 1031 aaKnown RBP7.47□□□□□ -1.21
PRDM4-206ENST00000550659 MAMDC2Q7Z304 686 aaPredicted RBP7.47□□□□□ -1.21
PRDM4-206ENST00000550659 SVOPQ8N4V2 548 aa7.47□□□□□ -1.21
PRDM4-206ENST00000550659 ATL2Q8NHH9 583 aa7.47□□□□□ -1.21
PRDM4-206ENST00000550659 BRF1Q92994 677 aa7.47□□□□□ -1.21
PRDM4-206ENST00000550659 LENG1Q96BZ8 264 aaPredicted RBP7.47□□□□□ -1.21
PRDM4-206ENST00000550659 FAM46AQ96IP4 442 aaKnown RBP7.47□□□□□ -1.21
PRDM4-206ENST00000550659 COX4I2Q96KJ9 171 aa7.47□□□□□ -1.21
PRDM4-206ENST00000550659 PRDM14Q9GZV8 571 aa7.47□□□□□ -1.21
PRDM4-206ENST00000550659 NOL6Q9H6R4 1146 aaKnown RBP7.47□□□□□ -1.21
PRDM4-206ENST00000550659 LRP6O75581 1613 aa7.47□□□□□ -1.21
PRDM4-206ENST00000550659 SHPRHQ149N8 1683 aa7.47□□□□□ -1.21
PRDM4-206ENST00000550659 USP19O94966 1318 aa7.47□□□□□ -1.21
PRDM4-206ENST00000550659 TTC21AQ8NDW8 1320 aa7.47□□□□□ -1.21
PRDM4-206ENST00000550659 PARD3Q8TEW0 1356 aa7.46□□□□□ -1.21
PRDM4-206ENST00000550659 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.46□□□□□ -1.22
PRDM4-206ENST00000550659 ARHGEF15O94989 841 aa7.46□□□□□ -1.22
PRDM4-206ENST00000550659 ALX3O95076 343 aa7.46□□□□□ -1.22
PRDM4-206ENST00000550659 EYA4O95677 639 aa7.46□□□□□ -1.22
PRDM4-206ENST00000550659 CPP00450 1065 aa7.46□□□□□ -1.22
PRDM4-206ENST00000550659 NFICP08651 508 aa7.46□□□□□ -1.22
PRDM4-206ENST00000550659 SHISA2Q6UWI4 295 aa7.46□□□□□ -1.22
PRDM4-206ENST00000550659 SEZ6L2Q6UXD5 910 aa7.46□□□□□ -1.22
PRDM4-206ENST00000550659 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.46□□□□□ -1.22
PRDM4-206ENST00000550659 CHMP4AQ9BY43 222 aa7.46□□□□□ -1.22
PRDM4-206ENST00000550659 CYP26B1Q9NR63 512 aa7.46□□□□□ -1.22
PRDM4-206ENST00000550659 FAN1Q9Y2M0 1017 aa7.46□□□□□ -1.22
PRDM4-206ENST00000550659 SF3B6Q9Y3B4 125 aaKnown RBP7.46□□□□□ -1.22
PRDM4-206ENST00000550659 KNSTRNQ9Y448 316 aa7.46□□□□□ -1.22
PRDM4-206ENST00000550659 CGNL1Q0VF96 1302 aa7.46□□□□□ -1.22
PRDM4-206ENST00000550659 COL18A1P39060 1754 aa7.46□□□□□ -1.22
PRDM4-206ENST00000550659 NPC1L1Q9UHC9 1359 aa7.46□□□□□ -1.22
PRDM4-206ENST00000550659 OPA1O60313 960 aa7.45□□□□□ -1.22
PRDM4-206ENST00000550659 EOMESO95936 686 aa7.45□□□□□ -1.22
PRDM4-206ENST00000550659 SNRPB2P08579 225 aaKnown RBP7.45□□□□□ -1.22
PRDM4-206ENST00000550659 GLB1P16278 677 aa7.45□□□□□ -1.22
PRDM4-206ENST00000550659 IGFALSP35858 605 aa7.45□□□□□ -1.22
PRDM4-206ENST00000550659 AMPD2Q01433 879 aa7.45□□□□□ -1.22
PRDM4-206ENST00000550659 SNW1Q13573 536 aaKnown RBP7.45□□□□□ -1.22
PRDM4-206ENST00000550659 PPP2R5DQ14738 602 aa7.45□□□□□ -1.22
PRDM4-206ENST00000550659 RRS1Q15050 365 aaKnown RBP7.45□□□□□ -1.22
PRDM4-206ENST00000550659 SF1Q15637 639 aaKnown RBP7.45□□□□□ -1.22
PRDM4-206ENST00000550659 GRIK4Q16099 956 aa7.45□□□□□ -1.22
PRDM4-206ENST00000550659 NTRK3Q16288 839 aa7.45□□□□□ -1.22
PRDM4-206ENST00000550659 UVSSAQ2YD98 709 aa7.45□□□□□ -1.22
PRDM4-206ENST00000550659 SLC35F1Q5T1Q4 408 aa7.45□□□□□ -1.22
PRDM4-206ENST00000550659 GPAT2Q6NUI2 795 aa7.45□□□□□ -1.22
PRDM4-206ENST00000550659 FGD2Q7Z6J4 655 aa7.45□□□□□ -1.22
PRDM4-206ENST00000550659 STRA8Q7Z7C7 330 aa7.45□□□□□ -1.22
PRDM4-206ENST00000550659 TMEM145Q8NBT3 493 aa7.45□□□□□ -1.22
PRDM4-206ENST00000550659 FBLIM1Q8WUP2 373 aa7.45□□□□□ -1.22
PRDM4-206ENST00000550659 LEO1Q8WVC0 666 aaPredicted RBP7.45□□□□□ -1.22
PRDM4-206ENST00000550659 C1orf159Q96HA4 380 aa7.45□□□□□ -1.22
PRDM4-206ENST00000550659 PRKRIP1Q9H875 184 aaPredicted RBP7.45□□□□□ -1.22
PRDM4-206ENST00000550659 GFOD1Q9NXC2 390 aa7.45□□□□□ -1.22
PRDM4-206ENST00000550659 THRAP3Q9Y2W1 955 aaKnown RBP7.45□□□□□ -1.22
PRDM4-206ENST00000550659 TNPO3Q9Y5L0 923 aaKnown RBP7.45□□□□□ -1.22
PRDM4-206ENST00000550659 LTN1O94822 1766 aa7.45□□□□□ -1.22
PRDM4-206ENST00000550659 RGPD5Q99666 1765 aa7.45□□□□□ -1.22
PRDM4-206ENST00000550659 MAP2P11137 1827 aaKnown RBP7.45□□□□□ -1.22
PRDM4-206ENST00000550659 BRD4O60885 1362 aaPredicted RBP7.45□□□□□ -1.22
PRDM4-206ENST00000550659 DYNC1LI2O43237 492 aaPredicted RBP7.44□□□□□ -1.22
PRDM4-206ENST00000550659 SIGLEC6O43699 453 aa7.44□□□□□ -1.22
PRDM4-206ENST00000550659 SPATA31C1P0DKV0 1188 aa7.44□□□□□ -1.22
PRDM4-206ENST00000550659 FLT3P36888 993 aa7.44□□□□□ -1.22
PRDM4-206ENST00000550659 KCNJ6P48051 423 aa7.44□□□□□ -1.22
PRDM4-206ENST00000550659 NRG1Q02297 640 aaPredicted RBP7.44□□□□□ -1.22
PRDM4-206ENST00000550659 DHCR24Q15392 516 aa7.44□□□□□ -1.22
PRDM4-206ENST00000550659 SGO2Q562F6 1265 aa7.44□□□□□ -1.22
PRDM4-206ENST00000550659 PKN3Q6P5Z2 889 aa7.44□□□□□ -1.22
PRDM4-206ENST00000550659 NECAB2Q7Z6G3 386 aa7.44□□□□□ -1.22
PRDM4-206ENST00000550659 LRRC59Q96AG4 307 aaKnown RBP7.44□□□□□ -1.22
PRDM4-206ENST00000550659 SCLYQ96I15 445 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms