RNA–Protein interactions for RNA: ENST00000550519.5

SMARCC2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-210ENST00000550519 CASTP20810 708 aaKnown RBP25.28■■□□□ 1.64
SMARCC2-210ENST00000550519 HSD17B4P51659 736 aa25.28■■□□□ 1.64
SMARCC2-210ENST00000550519 CHMP4BP1P59074 171 aa25.28■■□□□ 1.64
SMARCC2-210ENST00000550519 SEC23AQ15436 765 aa25.28■■□□□ 1.64
SMARCC2-210ENST00000550519 IFIT1BQ5T764 474 aaKnown RBP25.28■■□□□ 1.64
SMARCC2-210ENST00000550519 CHST3Q7LGC8 479 aa25.28■■□□□ 1.64
SMARCC2-210ENST00000550519 CAGE1Q8TC20 777 aa25.28■■□□□ 1.64
SMARCC2-210ENST00000550519 EMID1Q96A84 441 aaPredicted RBP25.28■■□□□ 1.64
SMARCC2-210ENST00000550519 MTMR8Q96EF0 704 aa25.28■■□□□ 1.64
SMARCC2-210ENST00000550519 AMNQ9BXJ7 453 aa25.28■■□□□ 1.64
SMARCC2-210ENST00000550519 PXMP2Q9NR77 195 aa25.28■■□□□ 1.64
SMARCC2-210ENST00000550519 SCN5AQ14524 2016 aa25.28■■□□□ 1.64
SMARCC2-210ENST00000550519 CFBP00751 764 aa25.27■■□□□ 1.64
SMARCC2-210ENST00000550519 CA3P07451 260 aa25.27■■□□□ 1.64
SMARCC2-210ENST00000550519 GDF6Q6KF10 455 aaPredicted RBP25.27■■□□□ 1.64
SMARCC2-210ENST00000550519 FTOQ9C0B1 505 aaKnown RBP eCLIP25.27■■□□□ 1.64
SMARCC2-210ENST00000550519 KLRF2D3W0D1 207 aa25.26■■□□□ 1.63
SMARCC2-210ENST00000550519 MRPS5P82675 430 aaKnown RBP25.26■■□□□ 1.63
SMARCC2-210ENST00000550519 DGKDQ16760 1214 aa25.26■■□□□ 1.63
SMARCC2-210ENST00000550519 CCDC155Q8N6L0 562 aa25.26■■□□□ 1.63
SMARCC2-210ENST00000550519 AFAP1L1Q8TED9 768 aa25.26■■□□□ 1.63
SMARCC2-210ENST00000550519 MAD2L2Q9UI95 211 aa25.26■■□□□ 1.63
SMARCC2-210ENST00000550519 MUC3AQ02505 3323 aa25.25■■□□□ 1.63
SMARCC2-210ENST00000550519 TNFRSF10AO00220 468 aa25.25■■□□□ 1.63
SMARCC2-210ENST00000550519 PPP1R11O60927 126 aaPredicted RBP25.25■■□□□ 1.63
SMARCC2-210ENST00000550519 BAIAP3O94812 1187 aa25.25■■□□□ 1.63
SMARCC2-210ENST00000550519 POU3F3P20264 500 aaPredicted RBP25.25■■□□□ 1.63
SMARCC2-210ENST00000550519 RBL2Q08999 1139 aa25.25■■□□□ 1.63
SMARCC2-210ENST00000550519 GPNMBQ14956 572 aa25.25■■□□□ 1.63
SMARCC2-210ENST00000550519 CYB5R4Q7L1T6 521 aa25.25■■□□□ 1.63
SMARCC2-210ENST00000550519 HERC6Q8IVU3 1022 aa25.25■■□□□ 1.63
SMARCC2-210ENST00000550519 DHX38Q92620 1227 aaKnown RBP25.25■■□□□ 1.63
SMARCC2-210ENST00000550519 MAP3K20Q9NYL2 800 aaKnown RBP25.25■■□□□ 1.63
SMARCC2-210ENST00000550519 GTF2IRD1Q9UHL9 959 aa25.25■■□□□ 1.63
SMARCC2-210ENST00000550519 MRVI1Q9Y6F6 885 aa25.25■■□□□ 1.63
SMARCC2-210ENST00000550519 PALM3A6NDB9 673 aaPredicted RBP25.24■■□□□ 1.63
SMARCC2-210ENST00000550519 ZBTB5O15062 677 aa25.24■■□□□ 1.63
SMARCC2-210ENST00000550519 LAMC2Q13753 1193 aa25.24■■□□□ 1.63
SMARCC2-210ENST00000550519 STOX1Q6ZVD7 989 aa25.24■■□□□ 1.63
SMARCC2-210ENST00000550519 PPTC7Q8NI37 304 aa25.24■■□□□ 1.63
SMARCC2-210ENST00000550519 YTHDC1Q96MU7 727 aaKnown RBP25.24■■□□□ 1.63
SMARCC2-210ENST00000550519 PDCD2LQ9BRP1 358 aa25.24■■□□□ 1.63
SMARCC2-210ENST00000550519 TANC1Q9C0D5 1861 aa25.23■■□□□ 1.63
SMARCC2-210ENST00000550519 TRANK1O15050 2925 aa25.23■■□□□ 1.63
SMARCC2-210ENST00000550519 RGS20O76081 388 aa25.23■■□□□ 1.63
SMARCC2-210ENST00000550519 SAMD3Q8N6K7 520 aa25.23■■□□□ 1.63
SMARCC2-210ENST00000550519 TET1Q8NFU7 2136 aa25.23■■□□□ 1.63
SMARCC2-210ENST00000550519 HDAC6Q9UBN7 1215 aa25.23■■□□□ 1.63
SMARCC2-210ENST00000550519 PCDHA1Q9Y5I3 950 aa25.23■■□□□ 1.63
SMARCC2-210ENST00000550519 HAS3O00219 553 aa25.22■■□□□ 1.63
SMARCC2-210ENST00000550519 RFXAPO00287 272 aa25.22■■□□□ 1.63
SMARCC2-210ENST00000550519 ARHGEF15O94989 841 aa25.22■■□□□ 1.63
SMARCC2-210ENST00000550519 F2P00734 622 aa25.22■■□□□ 1.63
SMARCC2-210ENST00000550519 HOXD8P13378 290 aaPredicted RBP25.22■■□□□ 1.63
SMARCC2-210ENST00000550519 GSPT1P15170 499 aaKnown RBP25.22■■□□□ 1.63
SMARCC2-210ENST00000550519 SELPP16109 830 aa25.22■■□□□ 1.63
SMARCC2-210ENST00000550519 PDE4AP27815 886 aa25.22■■□□□ 1.63
SMARCC2-210ENST00000550519 PSEN2P49810 448 aa25.22■■□□□ 1.63
SMARCC2-210ENST00000550519 TAP1Q03518 808 aa25.22■■□□□ 1.63
SMARCC2-210ENST00000550519 SLC35G1Q2M3R5 365 aa25.22■■□□□ 1.63
SMARCC2-210ENST00000550519 LRRC8DQ7L1W4 858 aa25.22■■□□□ 1.63
SMARCC2-210ENST00000550519 DHX37Q8IY37 1157 aaKnown RBP25.22■■□□□ 1.63
SMARCC2-210ENST00000550519 KATNAL1Q9BW62 490 aa25.22■■□□□ 1.63
SMARCC2-210ENST00000550519 MTCH2Q9Y6C9 303 aa25.22■■□□□ 1.63
SMARCC2-210ENST00000550519 KIAA1217Q5T5P2 1943 aa25.22■■□□□ 1.63
SMARCC2-210ENST00000550519 EPOPA6NHQ4 379 aa25.21■■□□□ 1.63
SMARCC2-210ENST00000550519 KIF28PB7ZC32 967 aa25.21■■□□□ 1.63
SMARCC2-210ENST00000550519 PARNO95453 639 aaKnown RBP25.21■■□□□ 1.63
SMARCC2-210ENST00000550519 VSIG10LQ86VR7 867 aa25.21■■□□□ 1.63
SMARCC2-210ENST00000550519 MICALL1Q8N3F8 863 aa25.21■■□□□ 1.63
SMARCC2-210ENST00000550519 C7orf31Q8N865 590 aa25.21■■□□□ 1.63
SMARCC2-210ENST00000550519 ADAMTS19Q8TE59 1207 aa25.21■■□□□ 1.63
SMARCC2-210ENST00000550519 TSPYL2Q9H2G4 693 aaPredicted RBP25.21■■□□□ 1.63
SMARCC2-210ENST00000550519 CERS4Q9HA82 394 aa25.21■■□□□ 1.63
SMARCC2-210ENST00000550519 CXCL10P02778 98 aa25.2■■□□□ 1.62
SMARCC2-210ENST00000550519 CKBP12277 381 aa25.2■■□□□ 1.62
SMARCC2-210ENST00000550519 TRDNQ13061 729 aa25.2■■□□□ 1.62
SMARCC2-210ENST00000550519 MFSD10Q14728 455 aa25.2■■□□□ 1.62
SMARCC2-210ENST00000550519 KIAA0753Q2KHM9 967 aa25.2■■□□□ 1.62
SMARCC2-210ENST00000550519 TTC22Q5TAA0 569 aa25.2■■□□□ 1.62
SMARCC2-210ENST00000550519 MYSM1Q5VVJ2 828 aa25.2■■□□□ 1.62
SMARCC2-210ENST00000550519 KCNV1Q6PIU1 500 aa25.2■■□□□ 1.62
SMARCC2-210ENST00000550519 ALG1Q9BT22 464 aa25.2■■□□□ 1.62
SMARCC2-210ENST00000550519 RIOX1Q9H6W3 641 aa25.2■■□□□ 1.62
SMARCC2-210ENST00000550519 NCOR1O75376 2440 aa25.2■■□□□ 1.62
SMARCC2-210ENST00000550519 NBNO60934 754 aa25.19■■□□□ 1.62
SMARCC2-210ENST00000550519 PPFIA4O75335 1185 aa25.19■■□□□ 1.62
SMARCC2-210ENST00000550519 CYP21A2P08686 494 aa25.19■■□□□ 1.62
SMARCC2-210ENST00000550519 ZNF286BP0CG31 522 aa25.19■■□□□ 1.62
SMARCC2-210ENST00000550519 MYCLP12524 364 aaPredicted RBP25.19■■□□□ 1.62
SMARCC2-210ENST00000550519 HOXA13P31271 388 aaPredicted RBP25.19■■□□□ 1.62
SMARCC2-210ENST00000550519 WDR5P61964 334 aaKnown RBP25.19■■□□□ 1.62
SMARCC2-210ENST00000550519 PTK7Q13308 1070 aa25.19■■□□□ 1.62
SMARCC2-210ENST00000550519 GRM4Q14833 912 aa25.19■■□□□ 1.62
SMARCC2-210ENST00000550519 PGM5Q15124 567 aa25.19■■□□□ 1.62
SMARCC2-210ENST00000550519 CELF3Q5SZQ8 465 aaKnown RBP25.19■■□□□ 1.62
SMARCC2-210ENST00000550519 IL31RAQ8NI17 732 aa25.19■■□□□ 1.62
SMARCC2-210ENST00000550519 U3KPZ7 1027 aaPredicted RBP25.19■■□□□ 1.62
SMARCC2-210ENST00000550519 MYH6P13533 1939 aa25.19■■□□□ 1.62
SMARCC2-210ENST00000550519 PRRC2BQ5JSZ5 2229 aaKnown RBP25.18■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms