RNA–Protein interactions for RNA: ENST00000550436.4

SVOP-203, Transcript of SV2 related protein, humanhuman

TSL 4

Gene SVOP, Length 695 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVOP-203ENST00000550436 FAM117BQ6P1L5 589 aa17.65■□□□□ 0.42
SVOP-203ENST00000550436 DNERQ8NFT8 737 aa17.65■□□□□ 0.42
SVOP-203ENST00000550436 EVI5LQ96CN4 794 aa17.65■□□□□ 0.42
SVOP-203ENST00000550436 WDR19Q8NEZ3 1342 aa17.65■□□□□ 0.42
SVOP-203ENST00000550436 RAD50Q92878 1312 aa17.65■□□□□ 0.42
SVOP-203ENST00000550436 MUC6Q6W4X9 2439 aa17.64■□□□□ 0.42
SVOP-203ENST00000550436 MYH6P13533 1939 aa17.64■□□□□ 0.42
SVOP-203ENST00000550436 MYO7AQ13402 2215 aa17.64■□□□□ 0.42
SVOP-203ENST00000550436 BAIAP3O94812 1187 aa17.64■□□□□ 0.41
SVOP-203ENST00000550436 HSPD1P10809 573 aaKnown RBP17.64■□□□□ 0.41
SVOP-203ENST00000550436 SELPP16109 830 aa17.64■□□□□ 0.41
SVOP-203ENST00000550436 ZNF200P98182 395 aaPredicted RBP17.64■□□□□ 0.41
SVOP-203ENST00000550436 NMIQ13287 307 aaPredicted RBP17.64■□□□□ 0.41
SVOP-203ENST00000550436 LRRC8DQ7L1W4 858 aa17.64■□□□□ 0.41
SVOP-203ENST00000550436 SYTL5Q8TDW5 730 aaPredicted RBP17.64■□□□□ 0.41
SVOP-203ENST00000550436 ALG1Q9BT22 464 aa17.64■□□□□ 0.41
SVOP-203ENST00000550436 ZBED2Q9BTP6 218 aa17.64■□□□□ 0.41
SVOP-203ENST00000550436 SUGCTQ9HAC7 445 aa17.64■□□□□ 0.41
SVOP-203ENST00000550436 HELLSQ9NRZ9 838 aa17.64■□□□□ 0.41
SVOP-203ENST00000550436 HDAC6Q9UBN7 1215 aa17.64■□□□□ 0.41
SVOP-203ENST00000550436 SORBS3O60504 671 aa17.63■□□□□ 0.41
SVOP-203ENST00000550436 HOXD11P31277 338 aaPredicted RBP17.63■□□□□ 0.41
SVOP-203ENST00000550436 HIC1Q14526 733 aa17.63■□□□□ 0.41
SVOP-203ENST00000550436 MBTPS1Q14703 1052 aa17.63■□□□□ 0.41
SVOP-203ENST00000550436 TRAF7Q6Q0C0 670 aa17.63■□□□□ 0.41
SVOP-203ENST00000550436 AFAP1L1Q8TED9 768 aa17.63■□□□□ 0.41
SVOP-203ENST00000550436 NEDD4P46934 1319 aa17.63■□□□□ 0.41
SVOP-203ENST00000550436 TRIM6-TRIM34B2RNG4 842 aa17.62■□□□□ 0.41
SVOP-203ENST00000550436 GH1P01241 217 aa17.62■□□□□ 0.41
SVOP-203ENST00000550436 CKBP12277 381 aa17.62■□□□□ 0.41
SVOP-203ENST00000550436 CDC37Q16543 378 aaPredicted RBP17.62■□□□□ 0.41
SVOP-203ENST00000550436 MCMDC2Q4G0Z9 681 aa17.62■□□□□ 0.41
SVOP-203ENST00000550436 TMEM31Q5JXX7 168 aa17.62■□□□□ 0.41
SVOP-203ENST00000550436 SESTD1Q86VW0 696 aa17.62■□□□□ 0.41
SVOP-203ENST00000550436 CAGE1Q8TC20 777 aa17.62■□□□□ 0.41
SVOP-203ENST00000550436 OSBPL3Q9H4L5 887 aa17.62■□□□□ 0.41
SVOP-203ENST00000550436 SIP14410 1827 aa17.62■□□□□ 0.41
SVOP-203ENST00000550436 LINC01553A4QN01 128 aa17.61■□□□□ 0.41
SVOP-203ENST00000550436 CXCL10P02778 98 aa17.61■□□□□ 0.41
SVOP-203ENST00000550436 ZNF286BP0CG31 522 aa17.61■□□□□ 0.41
SVOP-203ENST00000550436 PDE4AP27815 886 aa17.61■□□□□ 0.41
SVOP-203ENST00000550436 PSEN2P49810 448 aa17.61■□□□□ 0.41
SVOP-203ENST00000550436 TRIM71Q2Q1W2 868 aaKnown RBP17.61■□□□□ 0.41
SVOP-203ENST00000550436 CNKSR3Q6P9H4 555 aa17.61■□□□□ 0.41
SVOP-203ENST00000550436 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.61■□□□□ 0.41
SVOP-203ENST00000550436 RILPL2Q969X0 211 aa17.61■□□□□ 0.41
SVOP-203ENST00000550436 MPHOSPH6Q99547 160 aaKnown RBP17.61■□□□□ 0.41
SVOP-203ENST00000550436 GTF2IRD1Q9UHL9 959 aa17.61■□□□□ 0.41
SVOP-203ENST00000550436 DDX41Q9UJV9 622 aaKnown RBP17.61■□□□□ 0.41
SVOP-203ENST00000550436 GJB5O95377 273 aa17.6■□□□□ 0.41
SVOP-203ENST00000550436 EIF2AK2P19525 551 aaKnown RBP17.6■□□□□ 0.41
SVOP-203ENST00000550436 ERVK-21P61565 698 aa17.6■□□□□ 0.41
SVOP-203ENST00000550436 ZNF618Q5T7W0 954 aa17.6■□□□□ 0.41
SVOP-203ENST00000550436 MFSD6Q6ZSS7 791 aa17.6■□□□□ 0.41
SVOP-203ENST00000550436 ADGRF4Q8IZF3 695 aa17.6■□□□□ 0.41
SVOP-203ENST00000550436 CCDC155Q8N6L0 562 aa17.6■□□□□ 0.41
SVOP-203ENST00000550436 RGS22Q8NE09 1264 aa17.6■□□□□ 0.41
SVOP-203ENST00000550436 ZFP91Q96JP5 570 aaPredicted RBP17.6■□□□□ 0.41
SVOP-203ENST00000550436 TTC14Q96N46 770 aa17.6■□□□□ 0.41
SVOP-203ENST00000550436 VAT1LQ9HCJ6 419 aa17.6■□□□□ 0.41
SVOP-203ENST00000550436 CASTP20810 708 aaKnown RBP17.59■□□□□ 0.41
SVOP-203ENST00000550436 RBL2Q08999 1139 aa17.59■□□□□ 0.41
SVOP-203ENST00000550436 QRICH1Q2TAL8 776 aa17.59■□□□□ 0.41
SVOP-203ENST00000550436 RMDN3Q96TC7 470 aa17.59■□□□□ 0.41
SVOP-203ENST00000550436 RAD9AQ99638 391 aa17.59■□□□□ 0.41
SVOP-203ENST00000550436 C17orf80Q9BSJ5 609 aa17.59■□□□□ 0.41
SVOP-203ENST00000550436 OSBPL7Q9BZF2 842 aa17.59■□□□□ 0.41
SVOP-203ENST00000550436 UBE2ZQ9H832 354 aaPredicted RBP17.59■□□□□ 0.41
SVOP-203ENST00000550436 PNMA2Q9UL42 364 aa17.59■□□□□ 0.41
SVOP-203ENST00000550436 PIEZO1Q92508 2521 aa17.59■□□□□ 0.41
SVOP-203ENST00000550436 MICAL3Q7RTP6 2002 aa17.59■□□□□ 0.41
SVOP-203ENST00000550436 ABCB11O95342 1321 aa17.58■□□□□ 0.4
SVOP-203ENST00000550436 CCDC171Q6TFL3 1326 aa17.58■□□□□ 0.4
SVOP-203ENST00000550436 B4DLN1 442 aa17.58■□□□□ 0.4
SVOP-203ENST00000550436 HAS3O00219 553 aa17.58■□□□□ 0.4
SVOP-203ENST00000550436 IL9P15248 144 aa17.58■□□□□ 0.4
SVOP-203ENST00000550436 MRPL12P52815 198 aaKnown RBP17.58■□□□□ 0.4
SVOP-203ENST00000550436 MFSD10Q14728 455 aa17.58■□□□□ 0.4
SVOP-203ENST00000550436 STXBP2Q15833 593 aa17.58■□□□□ 0.4
SVOP-203ENST00000550436 KIAA0753Q2KHM9 967 aa17.58■□□□□ 0.4
SVOP-203ENST00000550436 C7orf31Q8N865 590 aa17.58■□□□□ 0.4
SVOP-203ENST00000550436 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.58■□□□□ 0.4
SVOP-203ENST00000550436 NSUN6Q8TEA1 469 aaKnown RBP17.58■□□□□ 0.4
SVOP-203ENST00000550436 TGS1Q96RS0 853 aaKnown RBP17.58■□□□□ 0.4
SVOP-203ENST00000550436 BAZ2BQ9UIF8 2168 aaKnown RBP17.57■□□□□ 0.4
SVOP-203ENST00000550436 ZMYM6O95789 1325 aa17.57■□□□□ 0.4
SVOP-203ENST00000550436 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.57■□□□□ 0.4
SVOP-203ENST00000550436 ABHD14A-ACY1A0A1B0GW23 586 aa17.57■□□□□ 0.4
SVOP-203ENST00000550436 PI4K2BG5E9Z4 385 aa17.57■□□□□ 0.4
SVOP-203ENST00000550436 OPLAHO14841 1288 aa17.57■□□□□ 0.4
SVOP-203ENST00000550436 GPR37L1O60883 481 aa17.57■□□□□ 0.4
SVOP-203ENST00000550436 RGS20O76081 388 aa17.57■□□□□ 0.4
SVOP-203ENST00000550436 KCNA5P22460 613 aa17.57■□□□□ 0.4
SVOP-203ENST00000550436 DGKDQ16760 1214 aa17.57■□□□□ 0.4
SVOP-203ENST00000550436 GPATCH4Q5T3I0 446 aaKnown RBP17.57■□□□□ 0.4
SVOP-203ENST00000550436 PNMA1Q8ND90 353 aa17.57■□□□□ 0.4
SVOP-203ENST00000550436 LMCD1Q9NZU5 365 aa17.57■□□□□ 0.4
SVOP-203ENST00000550436 HCN4Q9Y3Q4 1203 aa17.57■□□□□ 0.4
SVOP-203ENST00000550436 KDM4AO75164 1064 aa17.56■□□□□ 0.4
SVOP-203ENST00000550436 F2P00734 622 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms