RNA–Protein interactions for RNA: ENST00000550335.5

HCFC2-204, Transcript of host cell factor C2, humanhuman

TSL 5

Gene HCFC2, Length 1,223 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-204ENST00000550335 OVCH1Q7RTY7 1134 aa7.58□□□□□ -1.2
HCFC2-204ENST00000550335 CHMP4CQ96CF2 233 aa7.58□□□□□ -1.2
HCFC2-204ENST00000550335 CELF4Q9BZC1 486 aaKnown RBP7.58□□□□□ -1.2
HCFC2-204ENST00000550335 EMC7Q9NPA0 242 aa7.58□□□□□ -1.2
HCFC2-204ENST00000550335 IP6K2Q9UHH9 426 aa7.58□□□□□ -1.2
HCFC2-204ENST00000550335 ZNF180Q9UJW8 692 aa7.58□□□□□ -1.2
HCFC2-204ENST00000550335 PCDHA11Q9Y5I1 949 aa7.58□□□□□ -1.2
HCFC2-204ENST00000550335 KCNK3O14649 394 aa7.57□□□□□ -1.2
HCFC2-204ENST00000550335 NPHS1O60500 1241 aa7.57□□□□□ -1.2
HCFC2-204ENST00000550335 LSSP48449 732 aa7.57□□□□□ -1.2
HCFC2-204ENST00000550335 RNF111Q6ZNA4 994 aa7.57□□□□□ -1.2
HCFC2-204ENST00000550335 EP400NLQ6ZTU2 488 aa7.57□□□□□ -1.2
HCFC2-204ENST00000550335 OSTM1Q86WC4 334 aa7.57□□□□□ -1.2
HCFC2-204ENST00000550335 AHCYL2Q96HN2 611 aaKnown RBP7.57□□□□□ -1.2
HCFC2-204ENST00000550335 VTA1Q9NP79 307 aa7.57□□□□□ -1.2
HCFC2-204ENST00000550335 FBXL7Q9UJT9 491 aa7.57□□□□□ -1.2
HCFC2-204ENST00000550335 CBLCQ9ULV8 474 aa7.57□□□□□ -1.2
HCFC2-204ENST00000550335 C7orf72A4D263 438 aa7.56□□□□□ -1.2
HCFC2-204ENST00000550335 FBXO21O94952 628 aa7.56□□□□□ -1.2
HCFC2-204ENST00000550335 COL6A2P12110 1019 aa7.56□□□□□ -1.2
HCFC2-204ENST00000550335 EGR3Q06889 387 aa7.56□□□□□ -1.2
HCFC2-204ENST00000550335 PIN1Q13526 163 aaPredicted RBP7.56□□□□□ -1.2
HCFC2-204ENST00000550335 RNF43Q68DV7 783 aa7.56□□□□□ -1.2
HCFC2-204ENST00000550335 CEP68Q76N32 757 aa7.56□□□□□ -1.2
HCFC2-204ENST00000550335 C16orf59Q7L2K0 433 aa7.56□□□□□ -1.2
HCFC2-204ENST00000550335 SPACA3Q8IXA5 215 aa7.56□□□□□ -1.2
HCFC2-204ENST00000550335 ORAI3Q9BRQ5 295 aa7.56□□□□□ -1.2
HCFC2-204ENST00000550335 OXSMQ9NWU1 459 aa7.56□□□□□ -1.2
HCFC2-204ENST00000550335 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.55□□□□□ -1.2
HCFC2-204ENST00000550335 C1QTNF9BB2RNN3 333 aa7.55□□□□□ -1.2
HCFC2-204ENST00000550335 KIF3BO15066 747 aa7.55□□□□□ -1.2
HCFC2-204ENST00000550335 ULK1O75385 1050 aa7.55□□□□□ -1.2
HCFC2-204ENST00000550335 CEACAM5P06731 702 aa7.55□□□□□ -1.2
HCFC2-204ENST00000550335 ZSCAN20P17040 1043 aaPredicted RBP7.55□□□□□ -1.2
HCFC2-204ENST00000550335 TESK1Q15569 626 aa7.55□□□□□ -1.2
HCFC2-204ENST00000550335 DDB1Q16531 1140 aa7.55□□□□□ -1.2
HCFC2-204ENST00000550335 PPP4R4Q6NUP7 873 aa7.55□□□□□ -1.2
HCFC2-204ENST00000550335 PGM2L1Q6PCE3 622 aa7.55□□□□□ -1.2
HCFC2-204ENST00000550335 CD163Q86VB7 1156 aa7.55□□□□□ -1.2
HCFC2-204ENST00000550335 CERS3Q8IU89 383 aa7.55□□□□□ -1.2
HCFC2-204ENST00000550335 PLD6Q8N2A8 252 aaKnown RBP7.55□□□□□ -1.2
HCFC2-204ENST00000550335 SYTL4Q96C24 671 aaPredicted RBP7.55□□□□□ -1.2
HCFC2-204ENST00000550335 TRMT2BQ96GJ1 504 aaKnown RBP7.55□□□□□ -1.2
HCFC2-204ENST00000550335 TMEM169Q96HH4 297 aa7.55□□□□□ -1.2
HCFC2-204ENST00000550335 SSBP4Q9BWG4 385 aaPredicted RBP7.55□□□□□ -1.2
HCFC2-204ENST00000550335 PLAGL2Q9UPG8 496 aa7.55□□□□□ -1.2
HCFC2-204ENST00000550335 LUC7L2Q9Y383 392 aaKnown RBP7.55□□□□□ -1.2
HCFC2-204ENST00000550335 WTIPA6NIX2 430 aaPredicted RBP7.54□□□□□ -1.2
HCFC2-204ENST00000550335 H7C1D1 291 aa7.54□□□□□ -1.2
HCFC2-204ENST00000550335 SNUPNO95149 360 aaKnown RBP7.54□□□□□ -1.2
HCFC2-204ENST00000550335 GNAT1P11488 350 aa7.54□□□□□ -1.2
HCFC2-204ENST00000550335 PDE6AP16499 860 aa7.54□□□□□ -1.2
HCFC2-204ENST00000550335 LORP23490 312 aaPredicted RBP7.54□□□□□ -1.2
HCFC2-204ENST00000550335 GRIK1P39086 918 aa7.54□□□□□ -1.2
HCFC2-204ENST00000550335 IARSP41252 1262 aaKnown RBP7.54□□□□□ -1.2
HCFC2-204ENST00000550335 GATA4P43694 442 aa7.54□□□□□ -1.2
HCFC2-204ENST00000550335 NFIAQ12857 509 aa7.54□□□□□ -1.2
HCFC2-204ENST00000550335 MLC1Q15049 377 aa7.54□□□□□ -1.2
HCFC2-204ENST00000550335 SLC4A10Q6U841 1118 aa7.54□□□□□ -1.2
HCFC2-204ENST00000550335 PRR23CQ6ZRP0 262 aa7.54□□□□□ -1.2
HCFC2-204ENST00000550335 PNMA8AQ86V59 439 aaPredicted RBP7.54□□□□□ -1.2
HCFC2-204ENST00000550335 ALYREFQ86V81 257 aaKnown RBP7.54□□□□□ -1.2
HCFC2-204ENST00000550335 TEX2Q8IWB9 1127 aa7.54□□□□□ -1.2
HCFC2-204ENST00000550335 SHKBP1Q8TBC3 707 aa7.54□□□□□ -1.2
HCFC2-204ENST00000550335 PANK1Q8TE04 598 aa7.54□□□□□ -1.2
HCFC2-204ENST00000550335 USP33Q8TEY7 942 aa7.54□□□□□ -1.2
HCFC2-204ENST00000550335 JPH3Q8WXH2 748 aaPredicted RBP7.54□□□□□ -1.2
HCFC2-204ENST00000550335 RTFDC1Q9BY42 306 aaPredicted RBP7.54□□□□□ -1.2
HCFC2-204ENST00000550335 ATP13A1Q9HD20 1204 aa7.54□□□□□ -1.2
HCFC2-204ENST00000550335 LUC7LQ9NQ29 371 aaKnown RBP7.54□□□□□ -1.2
HCFC2-204ENST00000550335 MARCH2Q9P0N8 246 aa7.54□□□□□ -1.2
HCFC2-204ENST00000550335 GULP1Q9UBP9 304 aa7.54□□□□□ -1.2
HCFC2-204ENST00000550335 SPEF1Q9Y4P9 236 aa7.54□□□□□ -1.2
HCFC2-204ENST00000550335 WASHC2AQ641Q2 1341 aa7.53□□□□□ -1.2
HCFC2-204ENST00000550335 E2F8A0AVK6 867 aa7.53□□□□□ -1.2
HCFC2-204ENST00000550335 CYP26A1O43174 497 aa7.53□□□□□ -1.2
HCFC2-204ENST00000550335 TPD52L2O43399 206 aaKnown RBP7.53□□□□□ -1.2
HCFC2-204ENST00000550335 WIPF1O43516 503 aa7.53□□□□□ -1.2
HCFC2-204ENST00000550335 FUCA1P04066 466 aa7.53□□□□□ -1.2
HCFC2-204ENST00000550335 SLC9A1P19634 815 aa7.53□□□□□ -1.2
HCFC2-204ENST00000550335 ENDOUP21128 410 aaKnown RBP7.53□□□□□ -1.2
HCFC2-204ENST00000550335 FPR2P25090 351 aa7.53□□□□□ -1.2
HCFC2-204ENST00000550335 MECP2P51608 486 aaKnown RBP7.53□□□□□ -1.2
HCFC2-204ENST00000550335 GTF2A2P52657 109 aa7.53□□□□□ -1.2
HCFC2-204ENST00000550335 SCAND1P57086 179 aa7.53□□□□□ -1.2
HCFC2-204ENST00000550335 JAM2P57087 298 aa7.53□□□□□ -1.2
HCFC2-204ENST00000550335 ZNF174Q15697 407 aa7.53□□□□□ -1.2
HCFC2-204ENST00000550335 ARHGAP44Q17R89 818 aa7.53□□□□□ -1.2
HCFC2-204ENST00000550335 BROXQ5VW32 411 aa7.53□□□□□ -1.2
HCFC2-204ENST00000550335 HLA-DQA1Q5Y7H0 255 aa7.53□□□□□ -1.2
HCFC2-204ENST00000550335 CYP2R1Q6VVX0 501 aa7.53□□□□□ -1.2
HCFC2-204ENST00000550335 SLC5A5Q92911 643 aa7.53□□□□□ -1.2
HCFC2-204ENST00000550335 FUBP3Q96I24 572 aaKnown RBP eCLIP7.53□□□□□ -1.2
HCFC2-204ENST00000550335 METTL22Q9BUU2 404 aaPredicted RBP7.53□□□□□ -1.2
HCFC2-204ENST00000550335 SEMA3GQ9NS98 782 aa7.53□□□□□ -1.2
HCFC2-204ENST00000550335 C14orf119Q9NWQ9 140 aa7.53□□□□□ -1.2
HCFC2-204ENST00000550335 A0A1W2PQ27 194 aa7.52□□□□□ -1.21
HCFC2-204ENST00000550335 A0A1W2PQ64 194 aa7.52□□□□□ -1.21
HCFC2-204ENST00000550335 A0A1W2PQC6 194 aa7.52□□□□□ -1.21
HCFC2-204ENST00000550335 A0A1W2PQD8 194 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms