RNA–Protein interactions for RNA: ENST00000549358.5

TRAFD1-206, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 4

Gene TRAFD1, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-206ENST00000549358 INSL6Q9Y581 213 aa12.76□□□□□ -0.37
TRAFD1-206ENST00000549358 EFCAB14O75071 495 aa12.75□□□□□ -0.37
TRAFD1-206ENST00000549358 EDNRBP24530 442 aa12.75□□□□□ -0.37
TRAFD1-206ENST00000549358 RPS6P62753 249 aaKnown RBP12.75□□□□□ -0.37
TRAFD1-206ENST00000549358 ZP2Q05996 745 aa12.75□□□□□ -0.37
TRAFD1-206ENST00000549358 PTPRSQ13332 1948 aa12.75□□□□□ -0.37
TRAFD1-206ENST00000549358 CHST3Q7LGC8 479 aa12.75□□□□□ -0.37
TRAFD1-206ENST00000549358 SESTD1Q86VW0 696 aa12.75□□□□□ -0.37
TRAFD1-206ENST00000549358 C7orf31Q8N865 590 aa12.75□□□□□ -0.37
TRAFD1-206ENST00000549358 BANK1Q8NDB2 785 aa12.75□□□□□ -0.37
TRAFD1-206ENST00000549358 KAT2BQ92831 832 aa12.75□□□□□ -0.37
TRAFD1-206ENST00000549358 MFSD14AQ96MC6 490 aa12.75□□□□□ -0.37
TRAFD1-206ENST00000549358 SEC62Q99442 399 aaKnown RBP12.75□□□□□ -0.37
TRAFD1-206ENST00000549358 NAPBQ9H115 298 aa12.75□□□□□ -0.37
TRAFD1-206ENST00000549358 MUC6Q6W4X9 2439 aa12.74□□□□□ -0.37
TRAFD1-206ENST00000549358 LCTP09848 1927 aa12.74□□□□□ -0.37
TRAFD1-206ENST00000549358 FRMPD2Q68DX3 1309 aaPredicted RBP12.74□□□□□ -0.37
TRAFD1-206ENST00000549358 CCER2I3L3R5 266 aa12.74□□□□□ -0.37
TRAFD1-206ENST00000549358 MMP3P08254 477 aa12.74□□□□□ -0.37
TRAFD1-206ENST00000549358 CASTP20810 708 aaKnown RBP12.74□□□□□ -0.37
TRAFD1-206ENST00000549358 CTDSPL2Q05D32 466 aa12.74□□□□□ -0.37
TRAFD1-206ENST00000549358 LY6KQ17RY6 165 aa12.74□□□□□ -0.37
TRAFD1-206ENST00000549358 EPC2Q52LR7 807 aa12.74□□□□□ -0.37
TRAFD1-206ENST00000549358 ZNF618Q5T7W0 954 aa12.74□□□□□ -0.37
TRAFD1-206ENST00000549358 SYDE2Q5VT97 1194 aa12.74□□□□□ -0.37
TRAFD1-206ENST00000549358 TSHZ3Q63HK5 1081 aa12.74□□□□□ -0.37
TRAFD1-206ENST00000549358 BTNL9Q6UXG8 535 aa12.74□□□□□ -0.37
TRAFD1-206ENST00000549358 DNERQ8NFT8 737 aa12.74□□□□□ -0.37
TRAFD1-206ENST00000549358 DCAF4Q8WV16 495 aa12.74□□□□□ -0.37
TRAFD1-206ENST00000549358 PABPC5Q96DU9 382 aaKnown RBP12.74□□□□□ -0.37
TRAFD1-206ENST00000549358 PHOX2BQ99453 314 aa12.74□□□□□ -0.37
TRAFD1-206ENST00000549358 UPF3BQ9BZI7 483 aaKnown RBP12.74□□□□□ -0.37
TRAFD1-206ENST00000549358 GPCPD1Q9NPB8 672 aa12.74□□□□□ -0.37
TRAFD1-206ENST00000549358 HDAC6Q9UBN7 1215 aa12.74□□□□□ -0.37
TRAFD1-206ENST00000549358 PRKAG3Q9UGI9 489 aa12.74□□□□□ -0.37
TRAFD1-206ENST00000549358 GTF2IRD1Q9UHL9 959 aa12.74□□□□□ -0.37
TRAFD1-206ENST00000549358 FAM50BQ9Y247 325 aa12.74□□□□□ -0.37
TRAFD1-206ENST00000549358 MYH7P12883 1935 aa12.74□□□□□ -0.37
TRAFD1-206ENST00000549358 SCN10AQ9Y5Y9 1956 aa12.73□□□□□ -0.37
TRAFD1-206ENST00000549358 B4DLN1 442 aa12.73□□□□□ -0.37
TRAFD1-206ENST00000549358 RANBP6O60518 1105 aaKnown RBP12.73□□□□□ -0.37
TRAFD1-206ENST00000549358 GH1P01241 217 aa12.73□□□□□ -0.37
TRAFD1-206ENST00000549358 AMHP03971 560 aa12.73□□□□□ -0.37
TRAFD1-206ENST00000549358 IRS1P35568 1242 aa12.73□□□□□ -0.37
TRAFD1-206ENST00000549358 MRPL12P52815 198 aaKnown RBP12.73□□□□□ -0.37
TRAFD1-206ENST00000549358 RBL2Q08999 1139 aa12.73□□□□□ -0.37
TRAFD1-206ENST00000549358 GPM6BQ13491 265 aa12.73□□□□□ -0.37
TRAFD1-206ENST00000549358 TCEAL5Q5H9L2 206 aa12.73□□□□□ -0.37
TRAFD1-206ENST00000549358 CCDC62Q6P9F0 684 aa12.73□□□□□ -0.37
TRAFD1-206ENST00000549358 SEPT14Q6ZU15 432 aa12.73□□□□□ -0.37
TRAFD1-206ENST00000549358 ADHFE1Q8IWW8 467 aa12.73□□□□□ -0.37
TRAFD1-206ENST00000549358 MYOCDQ8IZQ8 938 aa12.73□□□□□ -0.37
TRAFD1-206ENST00000549358 ALG1Q9BT22 464 aa12.73□□□□□ -0.37
TRAFD1-206ENST00000549358 CLDND1Q9NY35 253 aa12.73□□□□□ -0.37
TRAFD1-206ENST00000549358 DDX19BQ9UMR2 479 aa12.73□□□□□ -0.37
TRAFD1-206ENST00000549358 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.73□□□□□ -0.37
TRAFD1-206ENST00000549358 H3BNC9 293 aa12.72□□□□□ -0.37
TRAFD1-206ENST00000549358 LGR5O75473 907 aa12.72□□□□□ -0.37
TRAFD1-206ENST00000549358 MS4A1P11836 297 aa12.72□□□□□ -0.37
TRAFD1-206ENST00000549358 HTRA4P83105 476 aaPredicted RBP12.72□□□□□ -0.37
TRAFD1-206ENST00000549358 ARHGAP1Q07960 439 aa12.72□□□□□ -0.37
TRAFD1-206ENST00000549358 PTK7Q13308 1070 aa12.72□□□□□ -0.37
TRAFD1-206ENST00000549358 MBTPS1Q14703 1052 aa12.72□□□□□ -0.37
TRAFD1-206ENST00000549358 TIGD5Q53EQ6 642 aa12.72□□□□□ -0.37
TRAFD1-206ENST00000549358 TRAF7Q6Q0C0 670 aa12.72□□□□□ -0.37
TRAFD1-206ENST00000549358 DBF4BQ8NFT6 615 aa12.72□□□□□ -0.37
TRAFD1-206ENST00000549358 WNT8BQ93098 351 aa12.72□□□□□ -0.37
TRAFD1-206ENST00000549358 MUTYHQ9UIF7 546 aa12.72□□□□□ -0.37
TRAFD1-206ENST00000549358 TET1Q8NFU7 2136 aa12.71□□□□□ -0.37
TRAFD1-206ENST00000549358 UPP2O95045 317 aa12.71□□□□□ -0.37
TRAFD1-206ENST00000549358 NOVP48745 357 aa12.71□□□□□ -0.37
TRAFD1-206ENST00000549358 PSEN2P49810 448 aa12.71□□□□□ -0.37
TRAFD1-206ENST00000549358 ZNF200P98182 395 aaPredicted RBP12.71□□□□□ -0.37
TRAFD1-206ENST00000549358 DGKDQ16760 1214 aa12.71□□□□□ -0.37
TRAFD1-206ENST00000549358 KIAA0753Q2KHM9 967 aa12.71□□□□□ -0.37
TRAFD1-206ENST00000549358 TRIM71Q2Q1W2 868 aaKnown RBP12.71□□□□□ -0.37
TRAFD1-206ENST00000549358 GPATCH3Q96I76 525 aa12.71□□□□□ -0.37
TRAFD1-206ENST00000549358 SAMD11Q96NU1 681 aa12.71□□□□□ -0.37
TRAFD1-206ENST00000549358 TMEM47Q9BQJ4 181 aa12.71□□□□□ -0.37
TRAFD1-206ENST00000549358 NSUN3Q9H649 340 aaKnown RBP12.71□□□□□ -0.37
TRAFD1-206ENST00000549358 PNMA2Q9UL42 364 aa12.71□□□□□ -0.37
TRAFD1-206ENST00000549358 PIEZO1Q92508 2521 aa12.7□□□□□ -0.38
TRAFD1-206ENST00000549358 SIP14410 1827 aa12.7□□□□□ -0.38
TRAFD1-206ENST00000549358 LTBRP36941 435 aa12.7□□□□□ -0.38
TRAFD1-206ENST00000549358 THPOP40225 353 aa12.7□□□□□ -0.38
TRAFD1-206ENST00000549358 MFSD10Q14728 455 aa12.7□□□□□ -0.38
TRAFD1-206ENST00000549358 COL19A1Q14993 1142 aa12.7□□□□□ -0.38
TRAFD1-206ENST00000549358 CLUL1Q15846 466 aa12.7□□□□□ -0.38
TRAFD1-206ENST00000549358 USH1GQ495M9 461 aa12.7□□□□□ -0.38
TRAFD1-206ENST00000549358 IER5LQ5T953 404 aa12.7□□□□□ -0.38
TRAFD1-206ENST00000549358 TMEM192Q8IY95 271 aa12.7□□□□□ -0.38
TRAFD1-206ENST00000549358 YME1L1Q96TA2 773 aa12.7□□□□□ -0.38
TRAFD1-206ENST00000549358 USP34Q70CQ2 3546 aa12.7□□□□□ -0.38
TRAFD1-206ENST00000549358 EMSYQ7Z589 1322 aa12.69□□□□□ -0.38
TRAFD1-206ENST00000549358 RSPH10B2B2RC85 870 aa12.69□□□□□ -0.38
TRAFD1-206ENST00000549358 ST18O60284 1047 aa12.69□□□□□ -0.38
TRAFD1-206ENST00000549358 RSPH10BP0C881 870 aa12.69□□□□□ -0.38
TRAFD1-206ENST00000549358 ZNF286BP0CG31 522 aa12.69□□□□□ -0.38
TRAFD1-206ENST00000549358 TOP1P11387 765 aaKnown RBP12.69□□□□□ -0.38
TRAFD1-206ENST00000549358 HIC1Q14526 733 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms