RNA–Protein interactions for RNA: ENST00000549308.5

PTPRR-209, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRR, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-209ENST00000549308 EIF2AK2P19525 551 aaKnown RBP13.63□□□□□ -0.23
PTPRR-209ENST00000549308 ARHGEF16Q5VV41 709 aa13.63□□□□□ -0.23
PTPRR-209ENST00000549308 KANK3Q6NY19 840 aa13.63□□□□□ -0.23
PTPRR-209ENST00000549308 ANKRD23Q86SG2 305 aa13.63□□□□□ -0.23
PTPRR-209ENST00000549308 PLA2G4DQ86XP0 818 aa13.63□□□□□ -0.23
PTPRR-209ENST00000549308 CEP57L1Q8IYX8 460 aa13.63□□□□□ -0.23
PTPRR-209ENST00000549308 IGSF22Q8N9C0 903 aa13.63□□□□□ -0.23
PTPRR-209ENST00000549308 SMC1BQ8NDV3 1235 aa13.63□□□□□ -0.23
PTPRR-209ENST00000549308 GTF3C2Q8WUA4 911 aaPredicted RBP13.63□□□□□ -0.23
PTPRR-209ENST00000549308 GJA10Q969M2 543 aa13.63□□□□□ -0.23
PTPRR-209ENST00000549308 RMDN3Q96TC7 470 aa13.63□□□□□ -0.23
PTPRR-209ENST00000549308 CCSER1Q9C0I3 900 aa13.63□□□□□ -0.23
PTPRR-209ENST00000549308 A1CFQ9NQ94 594 aaKnown RBP13.63□□□□□ -0.23
PTPRR-209ENST00000549308 PCDHA12Q9UN75 941 aa13.63□□□□□ -0.23
PTPRR-209ENST00000549308 SLC45A1Q9Y2W3 748 aa13.63□□□□□ -0.23
PTPRR-209ENST00000549308 PASKQ96RG2 1323 aa13.63□□□□□ -0.23
PTPRR-209ENST00000549308 KIF3CO14782 793 aa13.62□□□□□ -0.23
PTPRR-209ENST00000549308 ACTN4O43707 911 aaKnown RBP13.62□□□□□ -0.23
PTPRR-209ENST00000549308 SLC25A27O95847 323 aa13.62□□□□□ -0.23
PTPRR-209ENST00000549308 CYP2C8P10632 490 aa13.62□□□□□ -0.23
PTPRR-209ENST00000549308 COPB2P35606 906 aa13.62□□□□□ -0.23
PTPRR-209ENST00000549308 PDIA5Q14554 519 aa13.62□□□□□ -0.23
PTPRR-209ENST00000549308 KARSQ15046 597 aaKnown RBP13.62□□□□□ -0.23
PTPRR-209ENST00000549308 ZRSR1Q15695 479 aaKnown RBP13.62□□□□□ -0.23
PTPRR-209ENST00000549308 CEP55Q53EZ4 464 aa13.62□□□□□ -0.23
PTPRR-209ENST00000549308 RASAL3Q86YV0 1011 aa13.62□□□□□ -0.23
PTPRR-209ENST00000549308 ANKRD35Q8N283 1001 aa13.62□□□□□ -0.23
PTPRR-209ENST00000549308 IQUBQ8NA54 791 aa13.62□□□□□ -0.23
PTPRR-209ENST00000549308 CYP2W1Q8TAV3 490 aa13.62□□□□□ -0.23
PTPRR-209ENST00000549308 ETNPPLQ8TBG4 499 aa13.62□□□□□ -0.23
PTPRR-209ENST00000549308 SMCR8Q8TEV9 937 aaPredicted RBP13.62□□□□□ -0.23
PTPRR-209ENST00000549308 LENG9Q96B70 501 aa13.62□□□□□ -0.23
PTPRR-209ENST00000549308 ZFP91Q96JP5 570 aaPredicted RBP13.62□□□□□ -0.23
PTPRR-209ENST00000549308 FAM20AQ96MK3 541 aa13.62□□□□□ -0.23
PTPRR-209ENST00000549308 MXRA8Q9BRK3 442 aa13.62□□□□□ -0.23
PTPRR-209ENST00000549308 MOV10L1Q9BXT6 1211 aaKnown RBP13.62□□□□□ -0.23
PTPRR-209ENST00000549308 PXMP2Q9NR77 195 aa13.62□□□□□ -0.23
PTPRR-209ENST00000549308 CYP39A1Q9NYL5 469 aa13.62□□□□□ -0.23
PTPRR-209ENST00000549308 RBPJLQ9UBG7 517 aa13.62□□□□□ -0.23
PTPRR-209ENST00000549308 FRMPD4Q14CM0 1322 aa13.62□□□□□ -0.23
PTPRR-209ENST00000549308 IGLV3-22A0A075B6J6 115 aa13.61□□□□□ -0.23
PTPRR-209ENST00000549308 POTEMA6NI47 508 aa13.61□□□□□ -0.23
PTPRR-209ENST00000549308 MSH4O15457 936 aa13.61□□□□□ -0.23
PTPRR-209ENST00000549308 MYCLP12524 364 aaPredicted RBP13.61□□□□□ -0.23
PTPRR-209ENST00000549308 STAT6P42226 847 aa13.61□□□□□ -0.23
PTPRR-209ENST00000549308 SETQ01105 290 aaPredicted RBP13.61□□□□□ -0.23
PTPRR-209ENST00000549308 TYRO3Q06418 890 aa13.61□□□□□ -0.23
PTPRR-209ENST00000549308 PGM5Q15124 567 aa13.61□□□□□ -0.23
PTPRR-209ENST00000549308 RRAGBQ5VZM2 374 aa13.61□□□□□ -0.23
PTPRR-209ENST00000549308 KRT79Q5XKE5 535 aa13.61□□□□□ -0.23
PTPRR-209ENST00000549308 PCNX4Q63HM2 1172 aa13.61□□□□□ -0.23
PTPRR-209ENST00000549308 RGMBQ6NW40 437 aa13.61□□□□□ -0.23
PTPRR-209ENST00000549308 IL31RAQ8NI17 732 aa13.61□□□□□ -0.23
PTPRR-209ENST00000549308 ERCC4Q92889 916 aaPredicted RBP13.61□□□□□ -0.23
PTPRR-209ENST00000549308 CALML4Q96GE6 196 aa13.61□□□□□ -0.23
PTPRR-209ENST00000549308 PURBQ96QR8 312 aaKnown RBP13.61□□□□□ -0.23
PTPRR-209ENST00000549308 PDCD2LQ9BRP1 358 aa13.61□□□□□ -0.23
PTPRR-209ENST00000549308 FUCA2Q9BTY2 467 aa13.61□□□□□ -0.23
PTPRR-209ENST00000549308 TXNRD2Q9NNW7 524 aa13.61□□□□□ -0.23
PTPRR-209ENST00000549308 DISC1Q9NRI5 854 aa13.61□□□□□ -0.23
PTPRR-209ENST00000549308 PFASO15067 1338 aa13.61□□□□□ -0.23
PTPRR-209ENST00000549308 FSD2A1L4K1 749 aa13.61□□□□□ -0.23
PTPRR-209ENST00000549308 SLFN14P0C7P3 912 aa13.61□□□□□ -0.23
PTPRR-209ENST00000549308 ERCC3P19447 782 aa13.61□□□□□ -0.23
PTPRR-209ENST00000549308 CCND2P30279 289 aa13.61□□□□□ -0.23
PTPRR-209ENST00000549308 PNOCQ13519 176 aa13.61□□□□□ -0.23
PTPRR-209ENST00000549308 SAPCD2Q86UD0 394 aa13.61□□□□□ -0.23
PTPRR-209ENST00000549308 ELOA2Q8IYF1 753 aaPredicted RBP13.61□□□□□ -0.23
PTPRR-209ENST00000549308 FAM43AQ8N2R8 423 aa13.61□□□□□ -0.23
PTPRR-209ENST00000549308 NSUN6Q8TEA1 469 aaKnown RBP13.61□□□□□ -0.23
PTPRR-209ENST00000549308 SNX29Q8TEQ0 813 aa13.61□□□□□ -0.23
PTPRR-209ENST00000549308 CDK5RAP3Q96JB5 506 aa13.61□□□□□ -0.23
PTPRR-209ENST00000549308 PLIN2Q99541 437 aa13.61□□□□□ -0.23
PTPRR-209ENST00000549308 KIAA1468Q9P260 1216 aa13.61□□□□□ -0.23
PTPRR-209ENST00000549308 MEIS1O00470 390 aa13.6□□□□□ -0.23
PTPRR-209ENST00000549308 FOXN1O15353 648 aa13.6□□□□□ -0.23
PTPRR-209ENST00000549308 ERVK-9P63128 1117 aa13.6□□□□□ -0.23
PTPRR-209ENST00000549308 ERVK-24P63145 666 aa13.6□□□□□ -0.23
PTPRR-209ENST00000549308 POSTNQ15063 836 aa13.6□□□□□ -0.23
PTPRR-209ENST00000549308 E2F4Q16254 413 aa13.6□□□□□ -0.23
PTPRR-209ENST00000549308 Q3C1V9 767 aa13.6□□□□□ -0.23
PTPRR-209ENST00000549308 WDR78Q5VTH9 848 aa13.6□□□□□ -0.23
PTPRR-209ENST00000549308 NCAPH2Q6IBW4 605 aa13.6□□□□□ -0.23
PTPRR-209ENST00000549308 NIPA1Q7RTP0 329 aa13.6□□□□□ -0.23
PTPRR-209ENST00000549308 ZNF577Q9BSK1 485 aa13.6□□□□□ -0.23
PTPRR-209ENST00000549308 UBIAD1Q9Y5Z9 338 aa13.6□□□□□ -0.23
PTPRR-209ENST00000549308 TLL2Q9Y6L7 1015 aa13.6□□□□□ -0.23
PTPRR-209ENST00000549308 MANSC4A6NHS7 340 aaPredicted RBP13.59□□□□□ -0.23
PTPRR-209ENST00000549308 PRR29P0C7W0 189 aa13.59□□□□□ -0.23
PTPRR-209ENST00000549308 ARP10275 920 aa13.59□□□□□ -0.23
PTPRR-209ENST00000549308 AFMP43652 599 aa13.59□□□□□ -0.23
PTPRR-209ENST00000549308 GCLCP48506 637 aaPredicted RBP13.59□□□□□ -0.23
PTPRR-209ENST00000549308 MRPS9P82933 396 aaKnown RBP13.59□□□□□ -0.23
PTPRR-209ENST00000549308 STX1AQ16623 288 aa13.59□□□□□ -0.23
PTPRR-209ENST00000549308 L1TD1Q5T7N2 865 aaKnown RBP13.59□□□□□ -0.23
PTPRR-209ENST00000549308 LRCH2Q5VUJ6 765 aa13.59□□□□□ -0.23
PTPRR-209ENST00000549308 XRRA1Q6P2D8 792 aa13.59□□□□□ -0.23
PTPRR-209ENST00000549308 GRAMD1CQ8IYS0 662 aa13.59□□□□□ -0.23
PTPRR-209ENST00000549308 ERMNQ8TAM6 284 aa13.59□□□□□ -0.23
PTPRR-209ENST00000549308 PAGE5Q96GU1 130 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms