RNA–Protein interactions for RNA: ENST00000548919.5

RAPGEF3-218, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-218ENST00000548919 LCA5LO95447 670 aa15.66■□□□□ 0.1
RAPGEF3-218ENST00000548919 TDP2O95551 362 aa15.66■□□□□ 0.1
RAPGEF3-218ENST00000548919 NOP2P46087 812 aaKnown RBP15.66■□□□□ 0.1
RAPGEF3-218ENST00000548919 SLC10A5Q5PT55 438 aa15.66■□□□□ 0.1
RAPGEF3-218ENST00000548919 SPTY2D1Q68D10 685 aaPredicted RBP15.66■□□□□ 0.1
RAPGEF3-218ENST00000548919 CACNA2D4Q7Z3S7 1137 aa15.66■□□□□ 0.1
RAPGEF3-218ENST00000548919 REXO1Q8N1G1 1221 aaKnown RBP15.66■□□□□ 0.1
RAPGEF3-218ENST00000548919 LARP4BQ92615 738 aaKnown RBP15.66■□□□□ 0.1
RAPGEF3-218ENST00000548919 EYA3Q99504 573 aa15.66■□□□□ 0.1
RAPGEF3-218ENST00000548919 SPZ1Q9BXG8 430 aa15.66■□□□□ 0.1
RAPGEF3-218ENST00000548919 KANSL2Q9H9L4 492 aa15.66■□□□□ 0.1
RAPGEF3-218ENST00000548919 ESYT3A0FGR9 886 aa15.66■□□□□ 0.1
RAPGEF3-218ENST00000548919 GNA11P29992 359 aa15.66■□□□□ 0.1
RAPGEF3-218ENST00000548919 CALCRLQ16602 461 aa15.66■□□□□ 0.1
RAPGEF3-218ENST00000548919 TDRD12Q587J7 1177 aaKnown RBP15.66■□□□□ 0.1
RAPGEF3-218ENST00000548919 LRRC55Q6ZSA7 311 aa15.66■□□□□ 0.1
RAPGEF3-218ENST00000548919 UNC13DQ70J99 1090 aa15.66■□□□□ 0.1
RAPGEF3-218ENST00000548919 ZNF572Q7Z3I7 529 aaPredicted RBP15.66■□□□□ 0.1
RAPGEF3-218ENST00000548919 CAPS2Q9BXY5 557 aa15.66■□□□□ 0.1
RAPGEF3-218ENST00000548919 ANKIB1Q9P2G1 1089 aa15.66■□□□□ 0.1
RAPGEF3-218ENST00000548919 SEC63Q9UGP8 760 aaKnown RBP15.66■□□□□ 0.1
RAPGEF3-218ENST00000548919 WNK3Q9BYP7 1800 aa15.66■□□□□ 0.1
RAPGEF3-218ENST00000548919 FRMPD2Q68DX3 1309 aaPredicted RBP15.66■□□□□ 0.1
RAPGEF3-218ENST00000548919 PRLRP16471 622 aa15.65■□□□□ 0.1
RAPGEF3-218ENST00000548919 TCP1P17987 556 aaKnown RBP15.65■□□□□ 0.1
RAPGEF3-218ENST00000548919 TTC31Q49AM3 519 aaPredicted RBP15.65■□□□□ 0.1
RAPGEF3-218ENST00000548919 TTMPQ5BVD1 217 aa15.65■□□□□ 0.1
RAPGEF3-218ENST00000548919 KLHDC7AQ5VTJ3 777 aa15.65■□□□□ 0.1
RAPGEF3-218ENST00000548919 C8orf74Q6P047 294 aa15.65■□□□□ 0.1
RAPGEF3-218ENST00000548919 CCDC84Q86UT8 332 aaPredicted RBP15.65■□□□□ 0.1
RAPGEF3-218ENST00000548919 COA7Q96BR5 231 aa15.65■□□□□ 0.1
RAPGEF3-218ENST00000548919 CDK5RAP3Q96JB5 506 aa15.65■□□□□ 0.1
RAPGEF3-218ENST00000548919 MAST2Q6P0Q8 1798 aa15.65■□□□□ 0.1
RAPGEF3-218ENST00000548919 ROBO3Q96MS0 1386 aa15.65■□□□□ 0.1
RAPGEF3-218ENST00000548919 SPATA31A1Q5TZJ5 1347 aa15.65■□□□□ 0.1
RAPGEF3-218ENST00000548919 USP17L5A8MUK1 530 aa15.65■□□□□ 0.1
RAPGEF3-218ENST00000548919 PPP1R2P41236 205 aa15.65■□□□□ 0.1
RAPGEF3-218ENST00000548919 CDK8P49336 464 aa15.65■□□□□ 0.1
RAPGEF3-218ENST00000548919 GNGT1P63211 74 aa15.65■□□□□ 0.1
RAPGEF3-218ENST00000548919 ENOX2Q16206 610 aaKnown RBP15.65■□□□□ 0.1
RAPGEF3-218ENST00000548919 KCTD16Q68DU8 428 aa15.65■□□□□ 0.1
RAPGEF3-218ENST00000548919 DDX12PQ92771 950 aa15.65■□□□□ 0.1
RAPGEF3-218ENST00000548919 MTMR9Q96QG7 549 aa15.65■□□□□ 0.1
RAPGEF3-218ENST00000548919 SETDB2Q96T68 719 aa15.65■□□□□ 0.1
RAPGEF3-218ENST00000548919 IRS2Q9Y4H2 1338 aa15.65■□□□□ 0.1
RAPGEF3-218ENST00000548919 COL16A1Q07092 1604 aaPredicted RBP15.65■□□□□ 0.1
RAPGEF3-218ENST00000548919 EDIL3O43854 480 aa15.64■□□□□ 0.09
RAPGEF3-218ENST00000548919 GLI1P08151 1106 aa15.64■□□□□ 0.09
RAPGEF3-218ENST00000548919 EPHB4P54760 987 aa15.64■□□□□ 0.09
RAPGEF3-218ENST00000548919 RNASE9P60153 205 aaKnown RBP15.64■□□□□ 0.09
RAPGEF3-218ENST00000548919 KCNMA1Q12791 1236 aa15.64■□□□□ 0.09
RAPGEF3-218ENST00000548919 PPFIA1Q13136 1202 aa15.64■□□□□ 0.09
RAPGEF3-218ENST00000548919 ASTE1Q2TB18 679 aaPredicted RBP15.64■□□□□ 0.09
RAPGEF3-218ENST00000548919 HGSNATQ68CP4 663 aa15.64■□□□□ 0.09
RAPGEF3-218ENST00000548919 PDXDC1Q6P996 788 aa15.64■□□□□ 0.09
RAPGEF3-218ENST00000548919 SH2D3CQ8N5H7 860 aa15.64■□□□□ 0.09
RAPGEF3-218ENST00000548919 BCAS4Q8TDM0 211 aa15.64■□□□□ 0.09
RAPGEF3-218ENST00000548919 CEP95Q96GE4 821 aa15.64■□□□□ 0.09
RAPGEF3-218ENST00000548919 SH3GL2Q99962 352 aa15.64■□□□□ 0.09
RAPGEF3-218ENST00000548919 LZTS2Q9BRK4 669 aa15.64■□□□□ 0.09
RAPGEF3-218ENST00000548919 TBC1D7Q9P0N9 293 aa15.64■□□□□ 0.09
RAPGEF3-218ENST00000548919 GRIN2DO15399 1336 aa15.64■□□□□ 0.09
RAPGEF3-218ENST00000548919 ROBO1Q9Y6N7 1651 aa15.64■□□□□ 0.09
RAPGEF3-218ENST00000548919 PAFAH1B1P43034 410 aa15.64■□□□□ 0.09
RAPGEF3-218ENST00000548919 ARID5AQ03989 594 aa15.64■□□□□ 0.09
RAPGEF3-218ENST00000548919 ITIH3Q06033 890 aa15.64■□□□□ 0.09
RAPGEF3-218ENST00000548919 ECM1Q16610 540 aa15.64■□□□□ 0.09
RAPGEF3-218ENST00000548919 COBLL1Q53SF7 1204 aa15.64■□□□□ 0.09
RAPGEF3-218ENST00000548919 PLCD3Q8N3E9 789 aa15.64■□□□□ 0.09
RAPGEF3-218ENST00000548919 PACSIN2Q9UNF0 486 aaPredicted RBP15.64■□□□□ 0.09
RAPGEF3-218ENST00000548919 TLR2O60603 784 aa15.64■□□□□ 0.09
RAPGEF3-218ENST00000548919 BAG3O95817 575 aa15.64■□□□□ 0.09
RAPGEF3-218ENST00000548919 FTCDO95954 541 aa15.64■□□□□ 0.09
RAPGEF3-218ENST00000548919 KRT14P02533 472 aa15.64■□□□□ 0.09
RAPGEF3-218ENST00000548919 FAM153BP0C7A2 387 aa15.64■□□□□ 0.09
RAPGEF3-218ENST00000548919 CARSP49589 748 aaKnown RBP15.64■□□□□ 0.09
RAPGEF3-218ENST00000548919 FAM153CQ494X1 144 aa15.64■□□□□ 0.09
RAPGEF3-218ENST00000548919 GUF1Q8N442 669 aaKnown RBP15.64■□□□□ 0.09
RAPGEF3-218ENST00000548919 SNX29Q8TEQ0 813 aa15.64■□□□□ 0.09
RAPGEF3-218ENST00000548919 IFT81Q8WYA0 676 aa15.64■□□□□ 0.09
RAPGEF3-218ENST00000548919 ZIM3Q96PE6 472 aa15.64■□□□□ 0.09
RAPGEF3-218ENST00000548919 NOX5Q96PH1 765 aa15.64■□□□□ 0.09
RAPGEF3-218ENST00000548919 FGFBP2Q9BYJ0 223 aa15.64■□□□□ 0.09
RAPGEF3-218ENST00000548919 FAM153AQ9UHL3 310 aa15.64■□□□□ 0.09
RAPGEF3-218ENST00000548919 SNED1Q8TER0 1413 aa15.63■□□□□ 0.09
RAPGEF3-218ENST00000548919 TM4SF1P30408 202 aa15.63■□□□□ 0.09
RAPGEF3-218ENST00000548919 KCTD19Q17RG1 926 aaPredicted RBP15.63■□□□□ 0.09
RAPGEF3-218ENST00000548919 PTF1AQ7RTS3 328 aa15.63■□□□□ 0.09
RAPGEF3-218ENST00000548919 PPM1EQ8WY54 764 aa15.63■□□□□ 0.09
RAPGEF3-218ENST00000548919 RAD54LQ92698 747 aa15.63■□□□□ 0.09
RAPGEF3-218ENST00000548919 NFU1Q9UMS0 254 aa15.63■□□□□ 0.09
RAPGEF3-218ENST00000548919 SAMM50Q9Y512 469 aa15.63■□□□□ 0.09
RAPGEF3-218ENST00000548919 NAV1Q8NEY1 1877 aa15.63■□□□□ 0.09
RAPGEF3-218ENST00000548919 PVALEFA0A1B0GWK0 134 aa15.63■□□□□ 0.09
RAPGEF3-218ENST00000548919 ATP1A2P50993 1020 aa15.63■□□□□ 0.09
RAPGEF3-218ENST00000548919 NFIXQ14938 502 aa15.63■□□□□ 0.09
RAPGEF3-218ENST00000548919 TRADDQ15628 312 aa15.63■□□□□ 0.09
RAPGEF3-218ENST00000548919 IQCDQ96DY2 449 aa15.63■□□□□ 0.09
RAPGEF3-218ENST00000548919 RUFY1Q96T51 708 aa15.63■□□□□ 0.09
RAPGEF3-218ENST00000548919 STRCQ7RTU9 1775 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms