RNA–Protein interactions for RNA: ENST00000548877.1

CDX2-202, Transcript of caudal type homeobox 2, humanhuman

TSL 3

Gene CDX2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-202ENST00000548877 GTF2IRD1Q9UHL9 959 aa15.93■□□□□ 0.14
CDX2-202ENST00000548877 MICAL3Q7RTP6 2002 aa15.92■□□□□ 0.14
CDX2-202ENST00000548877 POTEB3A0JP26 581 aa15.92■□□□□ 0.14
CDX2-202ENST00000548877 GRXCR2A6NFK2 248 aa15.92■□□□□ 0.14
CDX2-202ENST00000548877 GH1P01241 217 aa15.92■□□□□ 0.14
CDX2-202ENST00000548877 PDHBP11177 359 aa15.92■□□□□ 0.14
CDX2-202ENST00000548877 CASTP20810 708 aaKnown RBP15.92■□□□□ 0.14
CDX2-202ENST00000548877 IKBKEQ14164 716 aa15.92■□□□□ 0.14
CDX2-202ENST00000548877 TRIM71Q2Q1W2 868 aaKnown RBP15.92■□□□□ 0.14
CDX2-202ENST00000548877 POTEBQ6S5H4 581 aa15.92■□□□□ 0.14
CDX2-202ENST00000548877 ALYREFQ86V81 257 aaKnown RBP15.92■□□□□ 0.14
CDX2-202ENST00000548877 NEK9Q8TD19 979 aa15.92■□□□□ 0.14
CDX2-202ENST00000548877 EMID1Q96A84 441 aaPredicted RBP15.92■□□□□ 0.14
CDX2-202ENST00000548877 TTC14Q96N46 770 aa15.92■□□□□ 0.14
CDX2-202ENST00000548877 HAS3O00219 553 aa15.91■□□□□ 0.14
CDX2-202ENST00000548877 KCNA5P22460 613 aa15.91■□□□□ 0.14
CDX2-202ENST00000548877 HTRA4P83105 476 aaPredicted RBP15.91■□□□□ 0.14
CDX2-202ENST00000548877 ZNF543Q08ER8 600 aa15.91■□□□□ 0.14
CDX2-202ENST00000548877 PTK7Q13308 1070 aa15.91■□□□□ 0.14
CDX2-202ENST00000548877 COL19A1Q14993 1142 aa15.91■□□□□ 0.14
CDX2-202ENST00000548877 SP7Q8TDD2 431 aaPredicted RBP15.91■□□□□ 0.14
CDX2-202ENST00000548877 FSD1Q9BTV5 496 aa15.91■□□□□ 0.14
CDX2-202ENST00000548877 GPCPD1Q9NPB8 672 aa15.91■□□□□ 0.14
CDX2-202ENST00000548877 MTMR7Q9Y216 660 aa15.91■□□□□ 0.14
CDX2-202ENST00000548877 INSL6Q9Y581 213 aa15.91■□□□□ 0.14
CDX2-202ENST00000548877 FRMPD2Q68DX3 1309 aaPredicted RBP15.91■□□□□ 0.14
CDX2-202ENST00000548877 COL4A6Q14031 1691 aa15.9■□□□□ 0.14
CDX2-202ENST00000548877 IL9P15248 144 aa15.9■□□□□ 0.14
CDX2-202ENST00000548877 PTCRAQ6ISU1 281 aaPredicted RBP15.9■□□□□ 0.14
CDX2-202ENST00000548877 MRPL38Q96DV4 380 aaKnown RBP15.9■□□□□ 0.14
CDX2-202ENST00000548877 IWS1Q96ST2 819 aa15.9■□□□□ 0.14
CDX2-202ENST00000548877 HDAC6Q9UBN7 1215 aa15.9■□□□□ 0.14
CDX2-202ENST00000548877 CTNNA3Q9UI47 895 aa15.9■□□□□ 0.14
CDX2-202ENST00000548877 ZNF318Q5VUA4 2279 aa15.89■□□□□ 0.13
CDX2-202ENST00000548877 F2P00734 622 aa15.89■□□□□ 0.13
CDX2-202ENST00000548877 HOXD8P13378 290 aaPredicted RBP15.89■□□□□ 0.13
CDX2-202ENST00000548877 MBTPS1Q14703 1052 aa15.89■□□□□ 0.13
CDX2-202ENST00000548877 DGKDQ16760 1214 aa15.89■□□□□ 0.13
CDX2-202ENST00000548877 LY6KQ17RY6 165 aa15.89■□□□□ 0.13
CDX2-202ENST00000548877 VPS53Q5VIR6 699 aa15.89■□□□□ 0.13
CDX2-202ENST00000548877 ERICH6BQ5W0A0 696 aa15.89■□□□□ 0.13
CDX2-202ENST00000548877 SAMD11Q96NU1 681 aa15.89■□□□□ 0.13
CDX2-202ENST00000548877 KATNAL1Q9BW62 490 aa15.89■□□□□ 0.13
CDX2-202ENST00000548877 DDX41Q9UJV9 622 aaKnown RBP15.89■□□□□ 0.13
CDX2-202ENST00000548877 MTUS1Q9ULD2 1270 aa15.89■□□□□ 0.13
CDX2-202ENST00000548877 MYH7BA7E2Y1 1941 aa15.89■□□□□ 0.13
CDX2-202ENST00000548877 WDFY4Q6ZS81 3184 aa15.88■□□□□ 0.13
CDX2-202ENST00000548877 LGR5O75473 907 aa15.88■□□□□ 0.13
CDX2-202ENST00000548877 PCP11498 1178 aaKnown RBP15.88■□□□□ 0.13
CDX2-202ENST00000548877 PSEN2P49810 448 aa15.88■□□□□ 0.13
CDX2-202ENST00000548877 GPATCH4Q5T3I0 446 aaKnown RBP15.88■□□□□ 0.13
CDX2-202ENST00000548877 ZNF618Q5T7W0 954 aa15.88■□□□□ 0.13
CDX2-202ENST00000548877 TICAM2Q86XR7 235 aa15.88■□□□□ 0.13
CDX2-202ENST00000548877 C7orf31Q8N865 590 aa15.88■□□□□ 0.13
CDX2-202ENST00000548877 FBXO22Q8NEZ5 403 aa15.88■□□□□ 0.13
CDX2-202ENST00000548877 SYTL5Q8TDW5 730 aaPredicted RBP15.88■□□□□ 0.13
CDX2-202ENST00000548877 NSUN6Q8TEA1 469 aaKnown RBP15.88■□□□□ 0.13
CDX2-202ENST00000548877 C17orf80Q9BSJ5 609 aa15.88■□□□□ 0.13
CDX2-202ENST00000548877 PRKAG3Q9UGI9 489 aa15.88■□□□□ 0.13
CDX2-202ENST00000548877 ZMYM6O95789 1325 aa15.88■□□□□ 0.13
CDX2-202ENST00000548877 EMSYQ7Z589 1322 aa15.88■□□□□ 0.13
CDX2-202ENST00000548877 C19orf67A6NJJ6 358 aa15.87■□□□□ 0.13
CDX2-202ENST00000548877 DCXO43602 365 aa15.87■□□□□ 0.13
CDX2-202ENST00000548877 FGAP02671 866 aa15.87■□□□□ 0.13
CDX2-202ENST00000548877 MRE11P49959 708 aa15.87■□□□□ 0.13
CDX2-202ENST00000548877 CHMP4BP1P59074 171 aa15.87■□□□□ 0.13
CDX2-202ENST00000548877 LAMC2Q13753 1193 aa15.87■□□□□ 0.13
CDX2-202ENST00000548877 STXBP2Q15833 593 aa15.87■□□□□ 0.13
CDX2-202ENST00000548877 PTPROQ16827 1216 aa15.87■□□□□ 0.13
CDX2-202ENST00000548877 TIGD5Q53EQ6 642 aa15.87■□□□□ 0.13
CDX2-202ENST00000548877 C20orf194Q5TEA3 1177 aa15.87■□□□□ 0.13
CDX2-202ENST00000548877 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.87■□□□□ 0.13
CDX2-202ENST00000548877 SEPT14Q6ZU15 432 aa15.87■□□□□ 0.13
CDX2-202ENST00000548877 PPTC7Q8NI37 304 aa15.87■□□□□ 0.13
CDX2-202ENST00000548877 WNT8BQ93098 351 aa15.87■□□□□ 0.13
CDX2-202ENST00000548877 TAAR1Q96RJ0 339 aa15.87■□□□□ 0.13
CDX2-202ENST00000548877 HELLSQ9NRZ9 838 aa15.87■□□□□ 0.13
CDX2-202ENST00000548877 SALL3Q9BXA9 1300 aa15.87■□□□□ 0.13
CDX2-202ENST00000548877 H3BNC9 293 aa15.86■□□□□ 0.13
CDX2-202ENST00000548877 EIF3JO75822 258 aaKnown RBP15.86■□□□□ 0.13
CDX2-202ENST00000548877 SSTR3P32745 418 aaPredicted RBP15.86■□□□□ 0.13
CDX2-202ENST00000548877 NHLH1Q02575 133 aa15.86■□□□□ 0.13
CDX2-202ENST00000548877 MFSD10Q14728 455 aa15.86■□□□□ 0.13
CDX2-202ENST00000548877 PLEKHG4Q58EX7 1191 aa15.86■□□□□ 0.13
CDX2-202ENST00000548877 OTUD7AQ8TE49 926 aaPredicted RBP15.86■□□□□ 0.13
CDX2-202ENST00000548877 TBC1D5Q92609 795 aa15.86■□□□□ 0.13
CDX2-202ENST00000548877 PABPC5Q96DU9 382 aaKnown RBP15.86■□□□□ 0.13
CDX2-202ENST00000548877 COL20A1Q9P218 1284 aa15.86■□□□□ 0.13
CDX2-202ENST00000548877 RCAN3Q9UKA8 241 aa15.86■□□□□ 0.13
CDX2-202ENST00000548877 ABCB11O95342 1321 aa15.86■□□□□ 0.13
CDX2-202ENST00000548877 RALGAPA2Q2PPJ7 1873 aa15.86■□□□□ 0.13
CDX2-202ENST00000548877 NLRC5Q86WI3 1866 aa15.86■□□□□ 0.13
CDX2-202ENST00000548877 TRIOO75962 3097 aa15.86■□□□□ 0.13
CDX2-202ENST00000548877 PPFIA4O75335 1185 aa15.85■□□□□ 0.13
CDX2-202ENST00000548877 AMHP03971 560 aa15.85■□□□□ 0.13
CDX2-202ENST00000548877 HOXC8P31273 242 aa15.85■□□□□ 0.13
CDX2-202ENST00000548877 NT5C2P49902 561 aa15.85■□□□□ 0.13
CDX2-202ENST00000548877 GHRHRQ02643 423 aa15.85■□□□□ 0.13
CDX2-202ENST00000548877 ZP2Q05996 745 aa15.85■□□□□ 0.13
CDX2-202ENST00000548877 CSPP1Q1MSJ5 1256 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms