RNA–Protein interactions for RNA: ENST00000548159.5

CNOT2-209, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 1 (best)

Gene CNOT2, Length 2,549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-209ENST00000548159 SHROOM1Q2M3G4 852 aaPredicted RBP17.87■□□□□ 0.45
CNOT2-209ENST00000548159 KRT79Q5XKE5 535 aa17.87■□□□□ 0.45
CNOT2-209ENST00000548159 WDR93Q6P2C0 686 aa17.87■□□□□ 0.45
CNOT2-209ENST00000548159 LRRC55Q6ZSA7 311 aa17.87■□□□□ 0.45
CNOT2-209ENST00000548159 GUF1Q8N442 669 aaKnown RBP17.87■□□□□ 0.45
CNOT2-209ENST00000548159 DRC1Q96MC2 740 aa17.87■□□□□ 0.45
CNOT2-209ENST00000548159 PURBQ96QR8 312 aaKnown RBP17.87■□□□□ 0.45
CNOT2-209ENST00000548159 MLXIPQ9HAP2 919 aa17.87■□□□□ 0.45
CNOT2-209ENST00000548159 JADE2Q9NQC1 790 aa17.87■□□□□ 0.45
CNOT2-209ENST00000548159 TBC1D7Q9P0N9 293 aa17.87■□□□□ 0.45
CNOT2-209ENST00000548159 PNMA6FA0A0J9YX94 578 aa17.87■□□□□ 0.45
CNOT2-209ENST00000548159 TTLL1O95922 423 aa17.87■□□□□ 0.45
CNOT2-209ENST00000548159 EIF4A3P38919 411 aaKnown RBP17.87■□□□□ 0.45
CNOT2-209ENST00000548159 PPP1R2P41236 205 aa17.87■□□□□ 0.45
CNOT2-209ENST00000548159 ORC2Q13416 577 aaPredicted RBP17.87■□□□□ 0.45
CNOT2-209ENST00000548159 KANSL2Q9H9L4 492 aa17.87■□□□□ 0.45
CNOT2-209ENST00000548159 RIC8AQ9NPQ8 531 aa17.87■□□□□ 0.45
CNOT2-209ENST00000548159 SERPINB13Q9UIV8 391 aa17.87■□□□□ 0.45
CNOT2-209ENST00000548159 MYH10P35580 1976 aa17.86■□□□□ 0.45
CNOT2-209ENST00000548159 LRRC53A6NM62 1247 aa17.86■□□□□ 0.45
CNOT2-209ENST00000548159 SHMT1P34896 483 aa17.86■□□□□ 0.45
CNOT2-209ENST00000548159 EHHADHQ08426 723 aa17.86■□□□□ 0.45
CNOT2-209ENST00000548159 RRAGAQ7L523 313 aa17.86■□□□□ 0.45
CNOT2-209ENST00000548159 DNAJC19Q96DA6 116 aa17.86■□□□□ 0.45
CNOT2-209ENST00000548159 USP40Q9NVE5 1235 aa17.86■□□□□ 0.45
CNOT2-209ENST00000548159 DDX25Q9UHL0 483 aaKnown RBP17.86■□□□□ 0.45
CNOT2-209ENST00000548159 FAN1Q9Y2M0 1017 aa17.86■□□□□ 0.45
CNOT2-209ENST00000548159 MPHOSPH10O00566 681 aaKnown RBP17.86■□□□□ 0.45
CNOT2-209ENST00000548159 CLK2P49760 499 aaKnown RBP17.86■□□□□ 0.45
CNOT2-209ENST00000548159 CDK17Q00537 523 aa17.86■□□□□ 0.45
CNOT2-209ENST00000548159 CACNB1Q02641 598 aaPredicted RBP17.86■□□□□ 0.45
CNOT2-209ENST00000548159 MAN2A1Q16706 1144 aa17.86■□□□□ 0.45
CNOT2-209ENST00000548159 DOK7Q18PE1 504 aa17.86■□□□□ 0.45
CNOT2-209ENST00000548159 TMEM119Q4V9L6 283 aa17.86■□□□□ 0.45
CNOT2-209ENST00000548159 GSPT2Q8IYD1 628 aaKnown RBP17.86■□□□□ 0.45
CNOT2-209ENST00000548159 SECISBP2LQ93073 1101 aaKnown RBP17.86■□□□□ 0.45
CNOT2-209ENST00000548159 IFIH1Q9BYX4 1025 aaKnown RBP17.86■□□□□ 0.45
CNOT2-209ENST00000548159 PCDHA13Q9Y5I0 950 aa17.86■□□□□ 0.45
CNOT2-209ENST00000548159 PLIN4Q96Q06 1357 aa17.85■□□□□ 0.45
CNOT2-209ENST00000548159 USP17L15C9J2P7 530 aa17.85■□□□□ 0.45
CNOT2-209ENST00000548159 USP17L13C9JLJ4 530 aa17.85■□□□□ 0.45
CNOT2-209ENST00000548159 USP17L11C9JVI0 530 aa17.85■□□□□ 0.45
CNOT2-209ENST00000548159 USP17L18D6R9N7 530 aa17.85■□□□□ 0.45
CNOT2-209ENST00000548159 USP17L22D6RA61 530 aa17.85■□□□□ 0.45
CNOT2-209ENST00000548159 USP17L17D6RBQ6 530 aa17.85■□□□□ 0.45
CNOT2-209ENST00000548159 USP17L19D6RCP7 530 aa17.85■□□□□ 0.45
CNOT2-209ENST00000548159 USP17L20D6RJB6 530 aa17.85■□□□□ 0.45
CNOT2-209ENST00000548159 hCG_1984214I3L0E3 225 aa17.85■□□□□ 0.45
CNOT2-209ENST00000548159 RAD21O60216 631 aa17.85■□□□□ 0.45
CNOT2-209ENST00000548159 SSBP05455 408 aaKnown RBP eCLIP17.85■□□□□ 0.45
CNOT2-209ENST00000548159 MYBL2P10244 700 aa17.85■□□□□ 0.45
CNOT2-209ENST00000548159 HOXA10P31260 410 aaPredicted RBP17.85■□□□□ 0.45
CNOT2-209ENST00000548159 HNRNPH3P31942 346 aaKnown RBP17.85■□□□□ 0.45
CNOT2-209ENST00000548159 KIF11P52732 1056 aa17.85■□□□□ 0.45
CNOT2-209ENST00000548159 RAD51AP2Q09MP3 1159 aa17.85■□□□□ 0.45
CNOT2-209ENST00000548159 USP17L24Q0WX57 530 aa17.85■□□□□ 0.45
CNOT2-209ENST00000548159 NFIAQ12857 509 aa17.85■□□□□ 0.45
CNOT2-209ENST00000548159 SPA17Q15506 151 aa17.85■□□□□ 0.45
CNOT2-209ENST00000548159 USP17L6PQ6QN14 398 aa17.85■□□□□ 0.45
CNOT2-209ENST00000548159 ZFPM1Q8IX07 1006 aa17.85■□□□□ 0.45
CNOT2-209ENST00000548159 ANKRD13CQ8N6S4 541 aa17.85■□□□□ 0.45
CNOT2-209ENST00000548159 ZNF713Q8N859 430 aaPredicted RBP17.85■□□□□ 0.45
CNOT2-209ENST00000548159 EHBP1Q8NDI1 1231 aa17.85■□□□□ 0.45
CNOT2-209ENST00000548159 FAM196BA6NMK8 535 aa17.84■□□□□ 0.45
CNOT2-209ENST00000548159 MOCS3O95396 460 aa17.84■□□□□ 0.45
CNOT2-209ENST00000548159 LMAN1P49257 510 aa17.84■□□□□ 0.45
CNOT2-209ENST00000548159 APBA1Q02410 837 aa17.84■□□□□ 0.45
CNOT2-209ENST00000548159 KCNMA1Q12791 1236 aa17.84■□□□□ 0.45
CNOT2-209ENST00000548159 CCDC102AQ96A19 550 aa17.84■□□□□ 0.45
CNOT2-209ENST00000548159 PSMB7Q99436 277 aa17.84■□□□□ 0.45
CNOT2-209ENST00000548159 RAB34Q9BZG1 259 aa17.84■□□□□ 0.45
CNOT2-209ENST00000548159 SALL4Q9UJQ4 1053 aa17.84■□□□□ 0.45
CNOT2-209ENST00000548159 NPHP3-ACAD11A0A0J9YXS1 232 aa17.84■□□□□ 0.45
CNOT2-209ENST00000548159 E9PMD0 336 aa17.84■□□□□ 0.45
CNOT2-209ENST00000548159 MRPS25P82663 173 aaKnown RBP17.84■□□□□ 0.45
CNOT2-209ENST00000548159 C2orf54Q08AI8 447 aa17.84■□□□□ 0.45
CNOT2-209ENST00000548159 PPP4R3AQ6IN85 833 aa17.84■□□□□ 0.45
CNOT2-209ENST00000548159 CAGE1Q8TC20 777 aa17.84■□□□□ 0.45
CNOT2-209ENST00000548159 COG1Q8WTW3 980 aa17.84■□□□□ 0.45
CNOT2-209ENST00000548159 BAP1Q92560 729 aa17.84■□□□□ 0.45
CNOT2-209ENST00000548159 PCDHA12Q9UN75 941 aa17.84■□□□□ 0.45
CNOT2-209ENST00000548159 MYH7BA7E2Y1 1941 aa17.84■□□□□ 0.45
CNOT2-209ENST00000548159 MARCH6O60337 910 aa17.83■□□□□ 0.45
CNOT2-209ENST00000548159 ADRA2BP18089 450 aa17.83■□□□□ 0.45
CNOT2-209ENST00000548159 LRRC63Q05C16 580 aa17.83■□□□□ 0.45
CNOT2-209ENST00000548159 COASYQ13057 564 aa17.83■□□□□ 0.45
CNOT2-209ENST00000548159 TANGO6Q9C0B7 1094 aa17.83■□□□□ 0.45
CNOT2-209ENST00000548159 GBP3Q9H0R5 595 aa17.83■□□□□ 0.45
CNOT2-209ENST00000548159 PSTPIP2Q9H939 334 aa17.83■□□□□ 0.45
CNOT2-209ENST00000548159 PCDHAC2Q9Y5I4 1007 aa17.83■□□□□ 0.45
CNOT2-209ENST00000548159 AKR1B10O60218 316 aa17.83■□□□□ 0.44
CNOT2-209ENST00000548159 CXCR5P32302 372 aa17.83■□□□□ 0.44
CNOT2-209ENST00000548159 CACNB3P54284 484 aa17.83■□□□□ 0.44
CNOT2-209ENST00000548159 CUL5Q93034 780 aa17.83■□□□□ 0.44
CNOT2-209ENST00000548159 DEF6Q9H4E7 631 aa17.83■□□□□ 0.44
CNOT2-209ENST00000548159 SH2D4AQ9H788 454 aa17.83■□□□□ 0.44
CNOT2-209ENST00000548159 NLRC4Q9NPP4 1024 aa17.83■□□□□ 0.44
CNOT2-209ENST00000548159 SMARCAL1Q9NZC9 954 aa17.83■□□□□ 0.44
CNOT2-209ENST00000548159 THSD7AQ9UPZ6 1657 aa17.83■□□□□ 0.44
CNOT2-209ENST00000548159 UBAP1LF5GYI3 381 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms