RNA–Protein interactions for RNA: ENST00000547530.6

BRF1-211, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRF1, Length 3,358 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-211ENST00000547530 PFKFB3Q16875 520 aaPredicted RBP16.73■□□□□ 0.27
BRF1-211ENST00000547530 VWA3BQ502W6 1294 aa16.73■□□□□ 0.27
BRF1-211ENST00000547530 TXNRD3Q86VQ6 643 aa16.73■□□□□ 0.27
BRF1-211ENST00000547530 GOLGA8KD6RF30 607 aa16.73■□□□□ 0.27
BRF1-211ENST00000547530 RAD51CO43502 376 aa16.73■□□□□ 0.27
BRF1-211ENST00000547530 OR52Z1P0C646 297 aa16.73■□□□□ 0.27
BRF1-211ENST00000547530 KRT13P13646 458 aa16.73■□□□□ 0.27
BRF1-211ENST00000547530 ZNF211Q13398 564 aaPredicted RBP16.73■□□□□ 0.27
BRF1-211ENST00000547530 CCDC38Q502W7 563 aa16.73■□□□□ 0.27
BRF1-211ENST00000547530 FAM133BQ5BKY9 247 aaKnown RBP16.73■□□□□ 0.27
BRF1-211ENST00000547530 SH2D4AQ9H788 454 aa16.73■□□□□ 0.27
BRF1-211ENST00000547530 PCDHA6Q9UN73 950 aa16.73■□□□□ 0.27
BRF1-211ENST00000547530 PCDHA8Q9Y5H6 950 aa16.73■□□□□ 0.27
BRF1-211ENST00000547530 ITIH6Q6UXX5 1313 aa16.73■□□□□ 0.27
BRF1-211ENST00000547530 CALM1P0DP23 149 aa16.72■□□□□ 0.27
BRF1-211ENST00000547530 CALM2P0DP24 149 aa16.72■□□□□ 0.27
BRF1-211ENST00000547530 CALM3P0DP25 149 aa16.72■□□□□ 0.27
BRF1-211ENST00000547530 SFMBT2Q5VUG0 894 aa16.72■□□□□ 0.27
BRF1-211ENST00000547530 DAAM2Q86T65 1068 aa16.72■□□□□ 0.27
BRF1-211ENST00000547530 CASKIN2Q8WXE0 1202 aa16.72■□□□□ 0.27
BRF1-211ENST00000547530 LTN1O94822 1766 aa16.72■□□□□ 0.27
BRF1-211ENST00000547530 ZNF233A6NK53 670 aa16.72■□□□□ 0.27
BRF1-211ENST00000547530 OPLAHO14841 1288 aa16.72■□□□□ 0.27
BRF1-211ENST00000547530 SEMA3EO15041 775 aa16.72■□□□□ 0.27
BRF1-211ENST00000547530 CYP19A1P11511 503 aaPredicted RBP16.72■□□□□ 0.27
BRF1-211ENST00000547530 NF2P35240 595 aa16.72■□□□□ 0.27
BRF1-211ENST00000547530 FUT2Q10981 343 aa16.72■□□□□ 0.27
BRF1-211ENST00000547530 MAEAQ7L5Y9 396 aa16.72■□□□□ 0.27
BRF1-211ENST00000547530 N4BP2L2Q92802 583 aaPredicted RBP16.72■□□□□ 0.27
BRF1-211ENST00000547530 MRRFQ96E11 262 aaKnown RBP16.72■□□□□ 0.27
BRF1-211ENST00000547530 CXorf56Q9H5V9 222 aa16.72■□□□□ 0.27
BRF1-211ENST00000547530 ARPP21Q9UBL0 812 aaPredicted RBP16.72■□□□□ 0.27
BRF1-211ENST00000547530 MYMKA6NI61 221 aa16.72■□□□□ 0.27
BRF1-211ENST00000547530 GCOM1H8Y6P7 765 aaPredicted RBP16.72■□□□□ 0.27
BRF1-211ENST00000547530 VIMP08670 466 aaKnown RBP16.72■□□□□ 0.27
BRF1-211ENST00000547530 MYZAPP0CAP1 466 aa16.72■□□□□ 0.27
BRF1-211ENST00000547530 TCP1P17987 556 aaKnown RBP16.72■□□□□ 0.27
BRF1-211ENST00000547530 SCP2P22307 547 aa16.72■□□□□ 0.27
BRF1-211ENST00000547530 PPP1R7Q15435 360 aa16.72■□□□□ 0.27
BRF1-211ENST00000547530 SLC9C1Q4G0N8 1177 aa16.72■□□□□ 0.27
BRF1-211ENST00000547530 ZNF473Q8WTR7 871 aaKnown RBP16.72■□□□□ 0.27
BRF1-211ENST00000547530 NCAPGQ9BPX3 1015 aa16.72■□□□□ 0.27
BRF1-211ENST00000547530 TLR10Q9BXR5 811 aa16.72■□□□□ 0.27
BRF1-211ENST00000547530 LRRC10BA6NIK2 292 aa16.71■□□□□ 0.27
BRF1-211ENST00000547530 DCDC2CA8MYV0 355 aa16.71■□□□□ 0.27
BRF1-211ENST00000547530 DAPK3O43293 454 aa16.71■□□□□ 0.27
BRF1-211ENST00000547530 MYBL1P10243 752 aa16.71■□□□□ 0.27
BRF1-211ENST00000547530 GBP2P32456 591 aaPredicted RBP16.71■□□□□ 0.27
BRF1-211ENST00000547530 PAK2Q13177 524 aa16.71■□□□□ 0.27
BRF1-211ENST00000547530 B4GALNT4Q76KP1 1039 aa16.71■□□□□ 0.27
BRF1-211ENST00000547530 KIAA0895Q8NCT3 520 aa16.71■□□□□ 0.27
BRF1-211ENST00000547530 TSG101Q99816 390 aa16.71■□□□□ 0.27
BRF1-211ENST00000547530 THAP9Q9H5L6 903 aa16.71■□□□□ 0.27
BRF1-211ENST00000547530 BMP2KQ9NSY1 1161 aaPredicted RBP16.71■□□□□ 0.27
BRF1-211ENST00000547530 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.71■□□□□ 0.27
BRF1-211ENST00000547530 LAMA4Q16363 1823 aa16.71■□□□□ 0.27
BRF1-211ENST00000547530 A0A087X0T9 212 aa16.71■□□□□ 0.27
BRF1-211ENST00000547530 CLIC2O15247 247 aa16.71■□□□□ 0.27
BRF1-211ENST00000547530 FAM228BP0C875 321 aa16.71■□□□□ 0.27
BRF1-211ENST00000547530 PEX19P40855 299 aa16.71■□□□□ 0.27
BRF1-211ENST00000547530 TUBB4BP68371 445 aa16.71■□□□□ 0.27
BRF1-211ENST00000547530 AMPD3Q01432 767 aa16.71■□□□□ 0.27
BRF1-211ENST00000547530 RPS6KA1Q15418 735 aa16.71■□□□□ 0.27
BRF1-211ENST00000547530 CALCRLQ16602 461 aa16.71■□□□□ 0.27
BRF1-211ENST00000547530 GJB7Q6PEY0 223 aa16.71■□□□□ 0.27
BRF1-211ENST00000547530 KCNV1Q6PIU1 500 aa16.71■□□□□ 0.27
BRF1-211ENST00000547530 OTUD6AQ7L8S5 288 aa16.71■□□□□ 0.27
BRF1-211ENST00000547530 NLRP14Q86W24 1093 aa16.71■□□□□ 0.27
BRF1-211ENST00000547530 ZNF507Q8TCN5 953 aa16.71■□□□□ 0.27
BRF1-211ENST00000547530 AENQ8WTP8 325 aaKnown RBP16.71■□□□□ 0.27
BRF1-211ENST00000547530 NUP58Q9BVL2 599 aa16.71■□□□□ 0.27
BRF1-211ENST00000547530 ADAM33Q9BZ11 813 aa16.71■□□□□ 0.27
BRF1-211ENST00000547530 PCDHB13Q9Y5F0 798 aa16.71■□□□□ 0.27
BRF1-211ENST00000547530 TMEM94Q12767 1356 aa16.71■□□□□ 0.26
BRF1-211ENST00000547530 KRIT1O00522 736 aa16.71■□□□□ 0.26
BRF1-211ENST00000547530 CYP4A11Q02928 519 aa16.71■□□□□ 0.26
BRF1-211ENST00000547530 NONOQ15233 471 aaKnown RBP eCLIP16.71■□□□□ 0.265e-6■■■■□ 20.4
BRF1-211ENST00000547530 DDX12PQ92771 950 aa16.71■□□□□ 0.26
BRF1-211ENST00000547530 STK38LQ9Y2H1 464 aa16.71■□□□□ 0.26
BRF1-211ENST00000547530 PDS5AQ29RF7 1337 aaKnown RBP16.7■□□□□ 0.26
BRF1-211ENST00000547530 ITGA4P13612 1032 aa16.7■□□□□ 0.26
BRF1-211ENST00000547530 MAGOHP61326 146 aaKnown RBP16.7■□□□□ 0.26
BRF1-211ENST00000547530 CNNM4Q6P4Q7 775 aa16.7■□□□□ 0.26
BRF1-211ENST00000547530 GIMAP8Q8ND71 665 aaPredicted RBP16.7■□□□□ 0.26
BRF1-211ENST00000547530 MAGOHBQ96A72 148 aaKnown RBP16.7■□□□□ 0.26
BRF1-211ENST00000547530 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.7■□□□□ 0.26
BRF1-211ENST00000547530 E9PMD0 336 aa16.7■□□□□ 0.26
BRF1-211ENST00000547530 KLRC4O43908 158 aa16.7■□□□□ 0.26
BRF1-211ENST00000547530 UPP2O95045 317 aa16.7■□□□□ 0.26
BRF1-211ENST00000547530 RETREG2Q8NC44 543 aa16.7■□□□□ 0.26
BRF1-211ENST00000547530 SH3RF3Q8TEJ3 882 aaPredicted RBP16.7■□□□□ 0.26
BRF1-211ENST00000547530 DYDC1Q8WWB3 177 aa16.7■□□□□ 0.26
BRF1-211ENST00000547530 WDR17Q8IZU2 1322 aa16.7■□□□□ 0.26
BRF1-211ENST00000547530 FGFR2P21802 821 aa16.69■□□□□ 0.26
BRF1-211ENST00000547530 FLT3P36888 993 aa16.69■□□□□ 0.26
BRF1-211ENST00000547530 KRT79Q5XKE5 535 aa16.69■□□□□ 0.26
BRF1-211ENST00000547530 TRIM51Q9BSJ1 452 aa16.69■□□□□ 0.26
BRF1-211ENST00000547530 TSGA10Q9BZW7 698 aa16.69■□□□□ 0.26
BRF1-211ENST00000547530 IKZF4Q9H2S9 585 aa16.69■□□□□ 0.26
BRF1-211ENST00000547530 VIPAS39Q9H9C1 493 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms