RNA–Protein interactions for RNA: ENST00000547208.5

BEST3-208, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 1,187 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-208ENST00000547208 PDCD2LQ9BRP1 358 aa11.96□□□□□ -0.49
BEST3-208ENST00000547208 SPZ1Q9BXG8 430 aa11.96□□□□□ -0.49
BEST3-208ENST00000547208 PPP1R12CQ9BZL4 782 aa11.96□□□□□ -0.49
BEST3-208ENST00000547208 ALDH8A1Q9H2A2 487 aaPredicted RBP11.96□□□□□ -0.49
BEST3-208ENST00000547208 ANO2Q9NQ90 1003 aa11.96□□□□□ -0.49
BEST3-208ENST00000547208 POLR3EQ9NVU0 708 aa11.96□□□□□ -0.49
BEST3-208ENST00000547208 TET1Q8NFU7 2136 aa11.95□□□□□ -0.5
BEST3-208ENST00000547208 FRMPD4Q14CM0 1322 aa11.95□□□□□ -0.5
BEST3-208ENST00000547208 EIF3JO75822 258 aaKnown RBP11.95□□□□□ -0.5
BEST3-208ENST00000547208 NR3C2P08235 984 aa11.95□□□□□ -0.5
BEST3-208ENST00000547208 MYL3P08590 195 aa11.95□□□□□ -0.5
BEST3-208ENST00000547208 PRR29P0C7W0 189 aa11.95□□□□□ -0.5
BEST3-208ENST00000547208 CYP2C18P33260 490 aa11.95□□□□□ -0.5
BEST3-208ENST00000547208 LIFRP42702 1097 aa11.95□□□□□ -0.5
BEST3-208ENST00000547208 SMAD3P84022 425 aaKnown RBP11.95□□□□□ -0.5
BEST3-208ENST00000547208 PGM5Q15124 567 aa11.95□□□□□ -0.5
BEST3-208ENST00000547208 RASIP1Q5U651 963 aa11.95□□□□□ -0.5
BEST3-208ENST00000547208 MYLIPQ8WY64 445 aa11.95□□□□□ -0.5
BEST3-208ENST00000547208 VWCEQ96DN2 955 aa11.95□□□□□ -0.5
BEST3-208ENST00000547208 RNPC3Q96LT9 517 aaKnown RBP11.95□□□□□ -0.5
BEST3-208ENST00000547208 CDX2Q99626 313 aaPredicted RBP11.95□□□□□ -0.5
BEST3-208ENST00000547208 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.95□□□□□ -0.5
BEST3-208ENST00000547208 MTG1Q9BT17 334 aaPredicted RBP11.95□□□□□ -0.5
BEST3-208ENST00000547208 NOC4LQ9BVI4 516 aaKnown RBP11.95□□□□□ -0.5
BEST3-208ENST00000547208 WNT8AQ9H1J5 351 aa11.95□□□□□ -0.5
BEST3-208ENST00000547208 TTYH1Q9H313 450 aaPredicted RBP11.95□□□□□ -0.5
BEST3-208ENST00000547208 HIPK3Q9H422 1215 aa11.95□□□□□ -0.5
BEST3-208ENST00000547208 PRDM6Q9NQX0 595 aa11.95□□□□□ -0.5
BEST3-208ENST00000547208 TRMT13Q9NUP7 481 aaKnown RBP11.95□□□□□ -0.5
BEST3-208ENST00000547208 DDX41Q9UJV9 622 aaKnown RBP11.95□□□□□ -0.5
BEST3-208ENST00000547208 MYO9BQ13459 2157 aa11.94□□□□□ -0.5
BEST3-208ENST00000547208 PLEKHA8P1O95397 391 aa11.94□□□□□ -0.5
BEST3-208ENST00000547208 MMP3P08254 477 aa11.94□□□□□ -0.5
BEST3-208ENST00000547208 SMARCA1P28370 1054 aa11.94□□□□□ -0.5
BEST3-208ENST00000547208 TRAF1Q13077 416 aa11.94□□□□□ -0.5
BEST3-208ENST00000547208 PPIGQ13427 754 aaKnown RBP eCLIP11.94□□□□□ -0.5
BEST3-208ENST00000547208 NBPF20Q3BBV1 942 aa11.94□□□□□ -0.5
BEST3-208ENST00000547208 TMEM240Q5SV17 173 aa11.94□□□□□ -0.5
BEST3-208ENST00000547208 CASC1Q6TDU7 716 aa11.94□□□□□ -0.5
BEST3-208ENST00000547208 VSIG10LQ86VR7 867 aa11.94□□□□□ -0.5
BEST3-208ENST00000547208 SRBD1Q8N5C6 995 aaKnown RBP11.94□□□□□ -0.5
BEST3-208ENST00000547208 PPP1R13LQ8WUF5 828 aa11.94□□□□□ -0.5
BEST3-208ENST00000547208 AFG1LQ8WV93 481 aa11.94□□□□□ -0.5
BEST3-208ENST00000547208 EMID1Q96A84 441 aaPredicted RBP11.94□□□□□ -0.5
BEST3-208ENST00000547208 LRRC2Q9BYS8 371 aa11.94□□□□□ -0.5
BEST3-208ENST00000547208 GCOM1H8Y6P7 765 aaPredicted RBP11.93□□□□□ -0.5
BEST3-208ENST00000547208 KPNA6O60684 536 aa11.93□□□□□ -0.5
BEST3-208ENST00000547208 CDC45O75419 566 aa11.93□□□□□ -0.5
BEST3-208ENST00000547208 GH1P01241 217 aa11.93□□□□□ -0.5
BEST3-208ENST00000547208 POLR2MP0CAP2 368 aa11.93□□□□□ -0.5
BEST3-208ENST00000547208 ACRP10323 421 aa11.93□□□□□ -0.5
BEST3-208ENST00000547208 RXRAP19793 462 aa11.93□□□□□ -0.5
BEST3-208ENST00000547208 KIF5BP33176 963 aa11.93□□□□□ -0.5
BEST3-208ENST00000547208 EXOSC10Q01780 885 aaKnown RBP11.93□□□□□ -0.5
BEST3-208ENST00000547208 ADCK5Q3MIX3 580 aa11.93□□□□□ -0.5
BEST3-208ENST00000547208 TSGA10IPQ3SY00 556 aa11.93□□□□□ -0.5
BEST3-208ENST00000547208 BRDTQ58F21 947 aaPredicted RBP11.93□□□□□ -0.5
BEST3-208ENST00000547208 NFRKBQ6P4R8 1299 aa11.93□□□□□ -0.5
BEST3-208ENST00000547208 SGMS1Q86VZ5 419 aa11.93□□□□□ -0.5
BEST3-208ENST00000547208 RASEFQ8IZ41 740 aa11.93□□□□□ -0.5
BEST3-208ENST00000547208 CMTR1Q8N1G2 835 aaKnown RBP11.93□□□□□ -0.5
BEST3-208ENST00000547208 TMTC2Q8N394 836 aa11.93□□□□□ -0.5
BEST3-208ENST00000547208 TMEM199Q8N511 208 aa11.93□□□□□ -0.5
BEST3-208ENST00000547208 USP38Q8NB14 1042 aa11.93□□□□□ -0.5
BEST3-208ENST00000547208 CTCFLQ8NI51 663 aaPredicted RBP11.93□□□□□ -0.5
BEST3-208ENST00000547208 PIBF1Q8WXW3 757 aa11.93□□□□□ -0.5
BEST3-208ENST00000547208 KAT2BQ92831 832 aa11.93□□□□□ -0.5
BEST3-208ENST00000547208 CTAGE1Q96RT6 745 aa11.93□□□□□ -0.5
BEST3-208ENST00000547208 CHD9Q3L8U1 2897 aa11.93□□□□□ -0.5
BEST3-208ENST00000547208 CCDC69A6NI79 296 aa11.92□□□□□ -0.5
BEST3-208ENST00000547208 MEIS2O14770 477 aa11.92□□□□□ -0.5
BEST3-208ENST00000547208 CYP2C9P11712 490 aa11.92□□□□□ -0.5
BEST3-208ENST00000547208 MYCLP12524 364 aaPredicted RBP11.92□□□□□ -0.5
BEST3-208ENST00000547208 HOXD8P13378 290 aaPredicted RBP11.92□□□□□ -0.5
BEST3-208ENST00000547208 SP2Q02086 613 aa11.92□□□□□ -0.5
BEST3-208ENST00000547208 NFXL1Q6ZNB6 911 aa11.92□□□□□ -0.5
BEST3-208ENST00000547208 ZNF365Q70YC5 407 aa11.92□□□□□ -0.5
BEST3-208ENST00000547208 FCHSD1Q86WN1 690 aa11.92□□□□□ -0.5
BEST3-208ENST00000547208 RAB11FIP4Q86YS3 637 aa11.92□□□□□ -0.5
BEST3-208ENST00000547208 GPKOWQ92917 476 aaPredicted RBP eCLIP11.92□□□□□ -0.5
BEST3-208ENST00000547208 ZFP91Q96JP5 570 aaPredicted RBP11.92□□□□□ -0.5
BEST3-208ENST00000547208 NEK1Q96PY6 1258 aa11.92□□□□□ -0.5
BEST3-208ENST00000547208 LZTS2Q9BRK4 669 aa11.92□□□□□ -0.5
BEST3-208ENST00000547208 SEMA6BQ9H3T3 888 aa11.92□□□□□ -0.5
BEST3-208ENST00000547208 IL23AQ9NPF7 189 aa11.92□□□□□ -0.5
BEST3-208ENST00000547208 MRVI1Q9Y6F6 885 aa11.92□□□□□ -0.5
BEST3-208ENST00000547208 KAT6AQ92794 2004 aa11.91□□□□□ -0.5
BEST3-208ENST00000547208 RBAK-RBAKDNI3L0D1 243 aa11.91□□□□□ -0.5
BEST3-208ENST00000547208 PIK3CDO00329 1044 aa11.91□□□□□ -0.5
BEST3-208ENST00000547208 SUPT20HL2P0C7V6 817 aa11.91□□□□□ -0.5
BEST3-208ENST00000547208 CALM1P0DP23 149 aa11.91□□□□□ -0.5
BEST3-208ENST00000547208 CALM2P0DP24 149 aa11.91□□□□□ -0.5
BEST3-208ENST00000547208 CALM3P0DP25 149 aa11.91□□□□□ -0.5
BEST3-208ENST00000547208 UBA1P22314 1058 aaKnown RBP11.91□□□□□ -0.5
BEST3-208ENST00000547208 GNAQP50148 359 aa11.91□□□□□ -0.5
BEST3-208ENST00000547208 CCL23P55773 120 aa11.91□□□□□ -0.5
BEST3-208ENST00000547208 MRPS9P82933 396 aaKnown RBP11.91□□□□□ -0.5
BEST3-208ENST00000547208 PTPN11Q06124 597 aaPredicted RBP11.91□□□□□ -0.5
BEST3-208ENST00000547208 ZNF697Q5TEC3 545 aa11.91□□□□□ -0.5
BEST3-208ENST00000547208 RNF20Q5VTR2 975 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms