RNA–Protein interactions for RNA: ENST00000546603.5

CPNE8-204, Transcript of copine 8, humanhuman

TSL 3

Gene CPNE8, Length 1,036 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-204ENST00000546603 H7BY64 318 aa8.82□□□□□ -1
CPNE8-204ENST00000546603 ASGR2P07307 311 aa8.82□□□□□ -1
CPNE8-204ENST00000546603 PABPC1P11940 636 aaKnown RBP8.82□□□□□ -1
CPNE8-204ENST00000546603 LCP1P13796 627 aa8.82□□□□□ -1
CPNE8-204ENST00000546603 FPR2P25090 351 aa8.82□□□□□ -1
CPNE8-204ENST00000546603 RSPO2Q6UXX9 243 aaPredicted RBP8.82□□□□□ -1
CPNE8-204ENST00000546603 SPOCD1Q6ZMY3 1216 aa8.82□□□□□ -1
CPNE8-204ENST00000546603 LRP10Q7Z4F1 713 aa8.82□□□□□ -1
CPNE8-204ENST00000546603 SEC14L1Q92503 715 aa8.82□□□□□ -1
CPNE8-204ENST00000546603 FAN1Q9Y2M0 1017 aa8.82□□□□□ -1
CPNE8-204ENST00000546603 COA3Q9Y2R0 106 aaPredicted RBP8.82□□□□□ -1
CPNE8-204ENST00000546603 SLC6A11P48066 632 aa8.81□□□□□ -1
CPNE8-204ENST00000546603 USP53Q70EK8 1073 aa8.81□□□□□ -1
CPNE8-204ENST00000546603 SPATC1Q76KD6 591 aa8.81□□□□□ -1
CPNE8-204ENST00000546603 NLRP10Q86W26 655 aa8.81□□□□□ -1
CPNE8-204ENST00000546603 CPA5Q8WXQ8 436 aa8.81□□□□□ -1
CPNE8-204ENST00000546603 SIT1Q9Y3P8 196 aa8.81□□□□□ -1
CPNE8-204ENST00000546603 ATF2P15336 505 aa8.8□□□□□ -1
CPNE8-204ENST00000546603 PMLP29590 882 aa8.8□□□□□ -1
CPNE8-204ENST00000546603 AFF3P51826 1226 aaKnown RBP8.8□□□□□ -1
CPNE8-204ENST00000546603 FOXO4P98177 505 aa8.8□□□□□ -1
CPNE8-204ENST00000546603 SERINC3Q13530 473 aa8.8□□□□□ -1
CPNE8-204ENST00000546603 DCAF4Q8WV16 495 aa8.8□□□□□ -1
CPNE8-204ENST00000546603 OSBP2Q969R2 916 aa8.8□□□□□ -1
CPNE8-204ENST00000546603 PWWP2AQ96N64 755 aa8.8□□□□□ -1
CPNE8-204ENST00000546603 BCAS3Q9H6U6 928 aa8.8□□□□□ -1
CPNE8-204ENST00000546603 CLDND1Q9NY35 253 aa8.8□□□□□ -1
CPNE8-204ENST00000546603 PLA2G2DQ9UNK4 145 aa8.8□□□□□ -1
CPNE8-204ENST00000546603 SSRP1Q08945 709 aaKnown RBP8.79□□□□□ -1
CPNE8-204ENST00000546603 IFRD2Q12894 506 aaPredicted RBP8.79□□□□□ -1
CPNE8-204ENST00000546603 FBLN7Q53RD9 439 aa8.79□□□□□ -1
CPNE8-204ENST00000546603 DPH6Q7L8W6 267 aa8.79□□□□□ -1
CPNE8-204ENST00000546603 B3GNT8Q7Z7M8 397 aa8.79□□□□□ -1
CPNE8-204ENST00000546603 PHF20Q9BVI0 1012 aa8.79□□□□□ -1
CPNE8-204ENST00000546603 KRTAP9-9Q9BYP9 154 aa8.79□□□□□ -1
CPNE8-204ENST00000546603 KRTAP9-4Q9BYQ2 154 aa8.79□□□□□ -1
CPNE8-204ENST00000546603 SGSM2O43147 1006 aa8.78□□□□□ -1
CPNE8-204ENST00000546603 LIMS1P48059 325 aa8.78□□□□□ -1
CPNE8-204ENST00000546603 CAP1Q01518 475 aa8.78□□□□□ -1
CPNE8-204ENST00000546603 CHRNA2Q15822 529 aa8.78□□□□□ -1
CPNE8-204ENST00000546603 SREK1Q8WXA9 508 aaKnown RBP8.78□□□□□ -1
CPNE8-204ENST00000546603 PFDN2Q9UHV9 154 aa8.78□□□□□ -1
CPNE8-204ENST00000546603 FBXL7Q9UJT9 491 aa8.78□□□□□ -1
CPNE8-204ENST00000546603 CACNB2Q08289 660 aaPredicted RBP8.77□□□□□ -1.01
CPNE8-204ENST00000546603 YOD1Q5VVQ6 348 aaPredicted RBP8.77□□□□□ -1.01
CPNE8-204ENST00000546603 MILR1Q7Z6M3 343 aa8.77□□□□□ -1.01
CPNE8-204ENST00000546603 SCUBE1Q8IWY4 988 aa8.77□□□□□ -1.01
CPNE8-204ENST00000546603 ZBTB38Q8NAP3 1195 aaPredicted RBP8.77□□□□□ -1.01
CPNE8-204ENST00000546603 MKL1Q969V6 931 aa8.77□□□□□ -1.01
CPNE8-204ENST00000546603 IPO9Q96P70 1041 aaKnown RBP8.77□□□□□ -1.01
CPNE8-204ENST00000546603 DEPDC7Q96QD5 511 aa8.77□□□□□ -1.01
CPNE8-204ENST00000546603 ZFYVE21Q9BQ24 234 aa8.77□□□□□ -1.01
CPNE8-204ENST00000546603 PALD1Q9ULE6 856 aa8.77□□□□□ -1.01
CPNE8-204ENST00000546603 HGSO14964 777 aaPredicted RBP8.76□□□□□ -1.01
CPNE8-204ENST00000546603 ADCY3O60266 1144 aa8.76□□□□□ -1.01
CPNE8-204ENST00000546603 DGKIO75912 1065 aa8.76□□□□□ -1.01
CPNE8-204ENST00000546603 MC3RP41968 323 aa8.76□□□□□ -1.01
CPNE8-204ENST00000546603 CDC6Q99741 560 aa8.76□□□□□ -1.01
CPNE8-204ENST00000546603 EPB41L1Q9H4G0 881 aa8.76□□□□□ -1.01
CPNE8-204ENST00000546603 RASA3Q14644 834 aa8.75□□□□□ -1.01
CPNE8-204ENST00000546603 NTRK3Q16288 839 aa8.75□□□□□ -1.01
CPNE8-204ENST00000546603 LONRF2Q1L5Z9 754 aa8.75□□□□□ -1.01
CPNE8-204ENST00000546603 STYK1Q6J9G0 422 aa8.75□□□□□ -1.01
CPNE8-204ENST00000546603 ETV3LQ6ZN32 361 aa8.75□□□□□ -1.01
CPNE8-204ENST00000546603 PCDH18Q9HCL0 1135 aa8.75□□□□□ -1.01
CPNE8-204ENST00000546603 ZNF652Q9Y2D9 606 aa8.75□□□□□ -1.01
CPNE8-204ENST00000546603 PMF1-BGLAPU3KQ54 211 aa8.75□□□□□ -1.01
CPNE8-204ENST00000546603 MSCO60682 206 aa8.74□□□□□ -1.01
CPNE8-204ENST00000546603 STEAP3Q658P3 488 aa8.74□□□□□ -1.01
CPNE8-204ENST00000546603 KCNT2Q6UVM3 1135 aa8.74□□□□□ -1.01
CPNE8-204ENST00000546603 LBX2Q6XYB7 198 aa8.74□□□□□ -1.01
CPNE8-204ENST00000546603 MIB1Q86YT6 1006 aa8.74□□□□□ -1.01
CPNE8-204ENST00000546603 IFNL3Q8IZI9 196 aa8.74□□□□□ -1.01
CPNE8-204ENST00000546603 LINC01356Q8N9X3 169 aa8.74□□□□□ -1.01
CPNE8-204ENST00000546603 SMARCC2Q8TAQ2 1214 aa8.74□□□□□ -1.01
CPNE8-204ENST00000546603 PMFBP1Q8TBY8 1022 aa8.74□□□□□ -1.01
CPNE8-204ENST00000546603 FNIP1Q8TF40 1166 aa8.74□□□□□ -1.01
CPNE8-204ENST00000546603 SRPK1Q96SB4 655 aaKnown RBP8.74□□□□□ -1.01
CPNE8-204ENST00000546603 CDIP1Q9H305 208 aa8.74□□□□□ -1.01
CPNE8-204ENST00000546603 SNTG2Q9NY99 539 aa8.74□□□□□ -1.01
CPNE8-204ENST00000546603 KDM2BQ8NHM5 1336 aa8.74□□□□□ -1.01
CPNE8-204ENST00000546603 TRBV23-1A0A0A0MS06 115 aa8.73□□□□□ -1.01
CPNE8-204ENST00000546603 DIAPH1O60610 1272 aaKnown RBP8.73□□□□□ -1.01
CPNE8-204ENST00000546603 MAFKO60675 156 aa8.73□□□□□ -1.01
CPNE8-204ENST00000546603 GPR85P60893 370 aa8.73□□□□□ -1.01
CPNE8-204ENST00000546603 KIZQ2M2Z5 673 aa8.73□□□□□ -1.01
CPNE8-204ENST00000546603 ZC3H12BQ5HYM0 836 aaKnown RBP8.73□□□□□ -1.01
CPNE8-204ENST00000546603 EMC4Q5J8M3 183 aa8.73□□□□□ -1.01
CPNE8-204ENST00000546603 ZC3H18Q86VM9 953 aaKnown RBP8.73□□□□□ -1.01
CPNE8-204ENST00000546603 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.73□□□□□ -1.01
CPNE8-204ENST00000546603 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.73□□□□□ -1.01
CPNE8-204ENST00000546603 NGRNQ9NPE2 291 aaKnown RBP8.73□□□□□ -1.01
CPNE8-204ENST00000546603 BLACEA4D250 179 aa8.72□□□□□ -1.01
CPNE8-204ENST00000546603 FAM221BA6H8Z2 402 aa8.72□□□□□ -1.01
CPNE8-204ENST00000546603 KRIT1O00522 736 aa8.72□□□□□ -1.01
CPNE8-204ENST00000546603 TADA3O75528 432 aa8.72□□□□□ -1.01
CPNE8-204ENST00000546603 CYP2C8P10632 490 aa8.72□□□□□ -1.01
CPNE8-204ENST00000546603 BMP7P18075 431 aa8.72□□□□□ -1.01
CPNE8-204ENST00000546603 SUMO1P63165 101 aaKnown RBP8.72□□□□□ -1.01
CPNE8-204ENST00000546603 HTRA3P83110 453 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms