RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 H7C1D1 291 aa16.21■□□□□ 0.19
HOXC11-202ENST00000546378 AGPSO00116 658 aa16.21■□□□□ 0.19
HOXC11-202ENST00000546378 RIMBP2O15034 1052 aa16.21■□□□□ 0.19
HOXC11-202ENST00000546378 ABCB4P21439 1286 aa16.21■□□□□ 0.19
HOXC11-202ENST00000546378 MECOMQ03112 1051 aa16.21■□□□□ 0.19
HOXC11-202ENST00000546378 PDXDC2PQ6P474 469 aa16.21■□□□□ 0.19
HOXC11-202ENST00000546378 OSBPL9Q96SU4 736 aa16.21■□□□□ 0.19
HOXC11-202ENST00000546378 MLXIPLQ9NP71 852 aa16.21■□□□□ 0.19
HOXC11-202ENST00000546378 BMP2KQ9NSY1 1161 aaPredicted RBP16.21■□□□□ 0.19
HOXC11-202ENST00000546378 RFX7Q2KHR2 1363 aa16.21■□□□□ 0.19
HOXC11-202ENST00000546378 GOLGA6L10A6NI86 522 aa16.21■□□□□ 0.19
HOXC11-202ENST00000546378 CDC25CP30307 473 aa16.21■□□□□ 0.19
HOXC11-202ENST00000546378 ATP2C1P98194 919 aaPredicted RBP16.21■□□□□ 0.19
HOXC11-202ENST00000546378 AMPD2Q01433 879 aa16.21■□□□□ 0.19
HOXC11-202ENST00000546378 UBE2SQ16763 222 aa16.21■□□□□ 0.19
HOXC11-202ENST00000546378 KIAA0753Q2KHM9 967 aa16.21■□□□□ 0.19
HOXC11-202ENST00000546378 COL23A1Q86Y22 540 aaPredicted RBP16.21■□□□□ 0.19
HOXC11-202ENST00000546378 LRRC15Q8TF66 581 aa16.21■□□□□ 0.19
HOXC11-202ENST00000546378 RTL9Q8NET4 1388 aa16.21■□□□□ 0.19
HOXC11-202ENST00000546378 PALMO75781 387 aa16.21■□□□□ 0.19
HOXC11-202ENST00000546378 TAL1P17542 331 aaPredicted RBP16.21■□□□□ 0.19
HOXC11-202ENST00000546378 SLC16A2P36021 539 aa16.21■□□□□ 0.19
HOXC11-202ENST00000546378 SLCO1A2P46721 670 aa16.21■□□□□ 0.19
HOXC11-202ENST00000546378 IFNAR2P48551 515 aa16.21■□□□□ 0.19
HOXC11-202ENST00000546378 CORO7P57737 925 aa16.21■□□□□ 0.19
HOXC11-202ENST00000546378 IKQ13123 557 aaPredicted RBP16.21■□□□□ 0.19
HOXC11-202ENST00000546378 POTEDQ86YR6 584 aa16.21■□□□□ 0.19
HOXC11-202ENST00000546378 MGARPQ8TDB4 240 aa16.21■□□□□ 0.19
HOXC11-202ENST00000546378 RNPC3Q96LT9 517 aaKnown RBP16.21■□□□□ 0.19
HOXC11-202ENST00000546378 MKRN1Q9UHC7 482 aaKnown RBP16.21■□□□□ 0.19
HOXC11-202ENST00000546378 SMCO2A6NFE2 343 aa16.2■□□□□ 0.18
HOXC11-202ENST00000546378 MEIS1O00470 390 aa16.2■□□□□ 0.18
HOXC11-202ENST00000546378 MMP10P09238 476 aa16.2■□□□□ 0.18
HOXC11-202ENST00000546378 ACTN1P12814 892 aa16.2■□□□□ 0.18
HOXC11-202ENST00000546378 SLC27A3Q5K4L6 730 aa16.2■□□□□ 0.18
HOXC11-202ENST00000546378 CHADLQ6NUI6 762 aa16.2■□□□□ 0.18
HOXC11-202ENST00000546378 DEFB132Q7Z7B7 95 aa16.2■□□□□ 0.18
HOXC11-202ENST00000546378 MTMR8Q96EF0 704 aa16.2■□□□□ 0.18
HOXC11-202ENST00000546378 CCDC114Q96M63 670 aa16.2■□□□□ 0.18
HOXC11-202ENST00000546378 PLCD4Q9BRC7 762 aa16.2■□□□□ 0.18
HOXC11-202ENST00000546378 ARHGAP20Q9P2F6 1191 aa16.2■□□□□ 0.18
HOXC11-202ENST00000546378 NUP98P52948 1817 aa16.2■□□□□ 0.18
HOXC11-202ENST00000546378 TJP1Q07157 1748 aa16.2■□□□□ 0.18
HOXC11-202ENST00000546378 HIBADHP31937 336 aaKnown RBP16.2■□□□□ 0.18
HOXC11-202ENST00000546378 PBX1P40424 430 aa16.2■□□□□ 0.18
HOXC11-202ENST00000546378 DNM2P50570 870 aa16.2■□□□□ 0.18
HOXC11-202ENST00000546378 DDR1Q08345 913 aa16.2■□□□□ 0.18
HOXC11-202ENST00000546378 IFFO1Q0D2I5 559 aa16.2■□□□□ 0.18
HOXC11-202ENST00000546378 ADSSL1Q8N142 457 aa16.2■□□□□ 0.18
HOXC11-202ENST00000546378 RDH13Q8NBN7 331 aa16.2■□□□□ 0.18
HOXC11-202ENST00000546378 P2RX5Q93086 422 aa16.2■□□□□ 0.18
HOXC11-202ENST00000546378 FAM84BQ96KN1 310 aaPredicted RBP16.2■□□□□ 0.18
HOXC11-202ENST00000546378 SELENOSQ9BQE4 189 aa16.2■□□□□ 0.18
HOXC11-202ENST00000546378 LSM14BQ9BX40 385 aaKnown RBP16.2■□□□□ 0.18
HOXC11-202ENST00000546378 LIMA1Q9UHB6 759 aaKnown RBP16.2■□□□□ 0.18
HOXC11-202ENST00000546378 NT5DC1Q5TFE4 455 aa16.2■□□□□ 0.18
HOXC11-202ENST00000546378 DDX47Q9H0S4 455 aaKnown RBP16.2■□□□□ 0.18
HOXC11-202ENST00000546378 DNAJC17Q9NVM6 304 aaKnown RBP16.2■□□□□ 0.18
HOXC11-202ENST00000546378 N4BP2Q86UW6 1770 aaPredicted RBP16.19■□□□□ 0.18
HOXC11-202ENST00000546378 PRPF3O43395 683 aaKnown RBP16.19■□□□□ 0.18
HOXC11-202ENST00000546378 HDLBPQ00341 1268 aaKnown RBP16.19■□□□□ 0.18
HOXC11-202ENST00000546378 MAEAQ7L5Y9 396 aa16.19■□□□□ 0.18
HOXC11-202ENST00000546378 CCDC25Q86WR0 208 aa16.19■□□□□ 0.18
HOXC11-202ENST00000546378 ZNF579Q8NAF0 562 aaKnown RBP16.19■□□□□ 0.18
HOXC11-202ENST00000546378 TAF4BQ92750 862 aa16.19■□□□□ 0.18
HOXC11-202ENST00000546378 THOC1Q96FV9 657 aaKnown RBP16.19■□□□□ 0.18
HOXC11-202ENST00000546378 NUP188Q5SRE5 1749 aa16.19■□□□□ 0.18
HOXC11-202ENST00000546378 LAMA4Q16363 1823 aa16.19■□□□□ 0.18
HOXC11-202ENST00000546378 UFL1O94874 794 aa16.19■□□□□ 0.18
HOXC11-202ENST00000546378 SEC23AQ15436 765 aa16.19■□□□□ 0.18
HOXC11-202ENST00000546378 TTMPQ5BVD1 217 aa16.19■□□□□ 0.18
HOXC11-202ENST00000546378 TBCKQ8TEA7 893 aa16.19■□□□□ 0.18
HOXC11-202ENST00000546378 SNX29Q8TEQ0 813 aa16.19■□□□□ 0.18
HOXC11-202ENST00000546378 SPAG5Q96R06 1193 aa16.19■□□□□ 0.18
HOXC11-202ENST00000546378 ZNF804BA4D1E1 1349 aa16.19■□□□□ 0.18
HOXC11-202ENST00000546378 SFI1A8K8P3 1242 aa16.18■□□□□ 0.18
HOXC11-202ENST00000546378 KLRF2D3W0D1 207 aa16.18■□□□□ 0.18
HOXC11-202ENST00000546378 USP8P40818 1118 aa16.18■□□□□ 0.18
HOXC11-202ENST00000546378 NAALADL2Q58DX5 795 aa16.18■□□□□ 0.18
HOXC11-202ENST00000546378 SLC10A5Q5PT55 438 aa16.18■□□□□ 0.18
HOXC11-202ENST00000546378 KLHL34Q8N239 644 aa16.18■□□□□ 0.18
HOXC11-202ENST00000546378 HNRNPLLQ8WVV9 542 aaKnown RBP16.18■□□□□ 0.18
HOXC11-202ENST00000546378 CCDC51Q96ER9 411 aa16.18■□□□□ 0.18
HOXC11-202ENST00000546378 CALML4Q96GE6 196 aa16.18■□□□□ 0.18
HOXC11-202ENST00000546378 CRNKL1Q9BZJ0 848 aaKnown RBP16.18■□□□□ 0.18
HOXC11-202ENST00000546378 FAM184BQ9ULE4 1060 aa16.18■□□□□ 0.18
HOXC11-202ENST00000546378 TDP2O95551 362 aa16.18■□□□□ 0.18
HOXC11-202ENST00000546378 HNRNPH1P31943 449 aaKnown RBP16.18■□□□□ 0.18
HOXC11-202ENST00000546378 CDR1P51861 262 aa16.18■□□□□ 0.18
HOXC11-202ENST00000546378 MDM1Q8TC05 714 aa16.18■□□□□ 0.18
HOXC11-202ENST00000546378 PIGSQ96S52 555 aa16.18■□□□□ 0.18
HOXC11-202ENST00000546378 NUDT12Q9BQG2 462 aa16.18■□□□□ 0.18
HOXC11-202ENST00000546378 TACO1Q9BSH4 297 aaKnown RBP16.18■□□□□ 0.18
HOXC11-202ENST00000546378 G3V3G9 751 aa16.18■□□□□ 0.18
HOXC11-202ENST00000546378 GNAT2P19087 354 aa16.18■□□□□ 0.18
HOXC11-202ENST00000546378 UBE4AQ14139 1066 aa16.18■□□□□ 0.18
HOXC11-202ENST00000546378 DCAF8Q5TAQ9 597 aa16.18■□□□□ 0.18
HOXC11-202ENST00000546378 IQCEQ6IPM2 695 aa16.18■□□□□ 0.18
HOXC11-202ENST00000546378 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.18■□□□□ 0.18
HOXC11-202ENST00000546378 ADAM33Q9BZ11 813 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms