RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 XRRA1Q6P2D8 792 aa19.26■□□□□ 0.67
LTBR-215ENST00000546296 REXO1Q8N1G1 1221 aaKnown RBP19.26■□□□□ 0.67
LTBR-215ENST00000546296 LLPHQ9BRT6 129 aaKnown RBP19.26■□□□□ 0.67
LTBR-215ENST00000546296 ALG1Q9BT22 464 aa19.26■□□□□ 0.67
LTBR-215ENST00000546296 RTEL1Q9NZ71 1219 aa19.26■□□□□ 0.67
LTBR-215ENST00000546296 KIAA0100Q14667 2235 aaKnown RBP19.26■□□□□ 0.67
LTBR-215ENST00000546296 RBBP6Q7Z6E9 1792 aaKnown RBP19.26■□□□□ 0.67
LTBR-215ENST00000546296 LCTP09848 1927 aa19.25■□□□□ 0.67
LTBR-215ENST00000546296 ADCY6O43306 1168 aa19.25■□□□□ 0.67
LTBR-215ENST00000546296 RGS19P49795 217 aa19.25■□□□□ 0.67
LTBR-215ENST00000546296 AP3B2Q13367 1082 aa19.25■□□□□ 0.67
LTBR-215ENST00000546296 LRRC41Q15345 812 aa19.25■□□□□ 0.67
LTBR-215ENST00000546296 DUSP28Q4G0W2 176 aa19.25■□□□□ 0.67
LTBR-215ENST00000546296 PCNX4Q63HM2 1172 aa19.25■□□□□ 0.67
LTBR-215ENST00000546296 NECAB2Q7Z6G3 386 aa19.25■□□□□ 0.67
LTBR-215ENST00000546296 FAM177A1Q8N128 213 aaPredicted RBP19.25■□□□□ 0.67
LTBR-215ENST00000546296 PAWRQ96IZ0 340 aaKnown RBP19.25■□□□□ 0.67
LTBR-215ENST00000546296 PGBD1Q96JS3 809 aa19.25■□□□□ 0.67
LTBR-215ENST00000546296 MRVI1Q9Y6F6 885 aa19.25■□□□□ 0.67
LTBR-215ENST00000546296 FRMPD4Q14CM0 1322 aa19.25■□□□□ 0.67
LTBR-215ENST00000546296 SYNRGQ9UMZ2 1314 aa19.25■□□□□ 0.67
LTBR-215ENST00000546296 DNM1LO00429 736 aa19.24■□□□□ 0.67
LTBR-215ENST00000546296 STAM2O75886 525 aa19.24■□□□□ 0.67
LTBR-215ENST00000546296 C6orf222P0C671 652 aaPredicted RBP19.24■□□□□ 0.67
LTBR-215ENST00000546296 CLK2P49760 499 aaKnown RBP19.24■□□□□ 0.67
LTBR-215ENST00000546296 ST3GAL1Q11201 340 aa19.24■□□□□ 0.67
LTBR-215ENST00000546296 GNPTABQ3T906 1256 aa19.24■□□□□ 0.67
LTBR-215ENST00000546296 TMEM63BQ5T3F8 832 aa19.24■□□□□ 0.67
LTBR-215ENST00000546296 TLK2Q86UE8 772 aa19.24■□□□□ 0.67
LTBR-215ENST00000546296 DIS3LQ8TF46 1054 aaKnown RBP19.24■□□□□ 0.67
LTBR-215ENST00000546296 ANO3Q9BYT9 981 aa19.24■□□□□ 0.67
LTBR-215ENST00000546296 KCNJ14Q9UNX9 436 aa19.24■□□□□ 0.67
LTBR-215ENST00000546296 GNEQ9Y223 722 aaKnown RBP19.24■□□□□ 0.67
LTBR-215ENST00000546296 NKRFO15226 690 aaKnown RBP eCLIP19.23■□□□□ 0.67
LTBR-215ENST00000546296 CD2BP2O95400 341 aaKnown RBP19.23■□□□□ 0.67
LTBR-215ENST00000546296 FDPSP14324 419 aaKnown RBP19.23■□□□□ 0.67
LTBR-215ENST00000546296 GJA9P57773 515 aa19.23■□□□□ 0.67
LTBR-215ENST00000546296 MRPS9P82933 396 aaKnown RBP19.23■□□□□ 0.67
LTBR-215ENST00000546296 TRIM29Q14134 588 aa19.23■□□□□ 0.67
LTBR-215ENST00000546296 LY6KQ17RY6 165 aa19.23■□□□□ 0.67
LTBR-215ENST00000546296 GNASQ5JWF2 1037 aa19.23■□□□□ 0.67
LTBR-215ENST00000546296 GALNT17Q6IS24 598 aa19.23■□□□□ 0.67
LTBR-215ENST00000546296 KCNV1Q6PIU1 500 aa19.23■□□□□ 0.67
LTBR-215ENST00000546296 NLRX1Q86UT6 975 aa19.23■□□□□ 0.67
LTBR-215ENST00000546296 OR6J1Q8NGC5 347 aa19.23■□□□□ 0.67
LTBR-215ENST00000546296 TMX3Q96JJ7 454 aa19.23■□□□□ 0.67
LTBR-215ENST00000546296 C11orf49Q9H6J7 331 aa19.23■□□□□ 0.67
LTBR-215ENST00000546296 PCDHA4Q9UN74 947 aa19.23■□□□□ 0.67
LTBR-215ENST00000546296 Q9Y3F1 56 aa19.23■□□□□ 0.67
LTBR-215ENST00000546296 MCM3APO60318 1980 aa19.23■□□□□ 0.67
LTBR-215ENST00000546296 ADAMTS3O15072 1205 aa19.22■□□□□ 0.67
LTBR-215ENST00000546296 ADAMTS4O75173 837 aa19.22■□□□□ 0.67
LTBR-215ENST00000546296 ARIH2O95376 493 aa19.22■□□□□ 0.67
LTBR-215ENST00000546296 PTGS1P23219 599 aa19.22■□□□□ 0.67
LTBR-215ENST00000546296 ZNF76P36508 570 aa19.22■□□□□ 0.67
LTBR-215ENST00000546296 MNX1P50219 401 aaPredicted RBP19.22■□□□□ 0.67
LTBR-215ENST00000546296 FOSBP53539 338 aa19.22■□□□□ 0.67
LTBR-215ENST00000546296 MLLT1Q03111 559 aaPredicted RBP19.22■□□□□ 0.67
LTBR-215ENST00000546296 BLIDQ8IZY5 108 aa19.22■□□□□ 0.67
LTBR-215ENST00000546296 FAM184AQ8NB25 1140 aa19.22■□□□□ 0.67
LTBR-215ENST00000546296 RASGRP4Q8TDF6 673 aa19.22■□□□□ 0.67
LTBR-215ENST00000546296 UPF3AQ9H1J1 476 aaKnown RBP19.22■□□□□ 0.67
LTBR-215ENST00000546296 DDX41Q9UJV9 622 aaKnown RBP19.22■□□□□ 0.67
LTBR-215ENST00000546296 ZEB2O60315 1214 aa19.21■□□□□ 0.67
LTBR-215ENST00000546296 RGS20O76081 388 aa19.21■□□□□ 0.67
LTBR-215ENST00000546296 HMGN5P82970 282 aaKnown RBP19.21■□□□□ 0.67
LTBR-215ENST00000546296 KCNA10Q16322 511 aa19.21■□□□□ 0.67
LTBR-215ENST00000546296 FSCN1Q16658 493 aaKnown RBP19.21■□□□□ 0.67
LTBR-215ENST00000546296 BRDTQ58F21 947 aaPredicted RBP19.21■□□□□ 0.67
LTBR-215ENST00000546296 CCDC62Q6P9F0 684 aa19.21■□□□□ 0.67
LTBR-215ENST00000546296 UBE2Q1Q7Z7E8 422 aa19.21■□□□□ 0.67
LTBR-215ENST00000546296 PCSK9Q8NBP7 692 aaKnown RBP19.21■□□□□ 0.67
LTBR-215ENST00000546296 KLHDC9Q8NEP7 349 aa19.21■□□□□ 0.67
LTBR-215ENST00000546296 COPS5Q92905 334 aa19.21■□□□□ 0.67
LTBR-215ENST00000546296 PHF20Q9BVI0 1012 aa19.21■□□□□ 0.67
LTBR-215ENST00000546296 SENP6Q9GZR1 1112 aaPredicted RBP19.21■□□□□ 0.67
LTBR-215ENST00000546296 GJB4Q9NTQ9 266 aa19.21■□□□□ 0.67
LTBR-215ENST00000546296 MYADML2A6NDP7 307 aa19.2■□□□□ 0.66
LTBR-215ENST00000546296 FIBPO43427 364 aa19.2■□□□□ 0.66
LTBR-215ENST00000546296 GH1P01241 217 aa19.2■□□□□ 0.66
LTBR-215ENST00000546296 TGFB3P10600 412 aa19.2■□□□□ 0.66
LTBR-215ENST00000546296 SREBF1P36956 1147 aa19.2■□□□□ 0.66
LTBR-215ENST00000546296 IRX5P78411 483 aaPredicted RBP19.2■□□□□ 0.66
LTBR-215ENST00000546296 ARHGAP4P98171 946 aa19.2■□□□□ 0.66
LTBR-215ENST00000546296 BEX3Q00994 111 aa19.2■□□□□ 0.66
LTBR-215ENST00000546296 DHX37Q8IY37 1157 aaKnown RBP19.2■□□□□ 0.66
LTBR-215ENST00000546296 FERMT2Q96AC1 680 aa19.2■□□□□ 0.66
LTBR-215ENST00000546296 INPP4AQ96PE3 977 aaPredicted RBP19.2■□□□□ 0.66
LTBR-215ENST00000546296 TSEN34Q9BSV6 310 aaKnown RBP19.2■□□□□ 0.66
LTBR-215ENST00000546296 SPATA31C2B4DYI2 1134 aa19.19■□□□□ 0.66
LTBR-215ENST00000546296 CPT1AP50416 773 aa19.19■□□□□ 0.66
LTBR-215ENST00000546296 DAGLBQ8NCG7 672 aa19.19■□□□□ 0.66
LTBR-215ENST00000546296 VTI1AQ96AJ9 217 aa19.19■□□□□ 0.66
LTBR-215ENST00000546296 CDHR1Q96JP9 859 aa19.19■□□□□ 0.66
LTBR-215ENST00000546296 HTATIP2Q9BUP3 242 aa19.19■□□□□ 0.66
LTBR-215ENST00000546296 BRMS1Q9HCU9 246 aa19.19■□□□□ 0.66
LTBR-215ENST00000546296 PHF24Q9UPV7 400 aa19.19■□□□□ 0.66
LTBR-215ENST00000546296 UBIAD1Q9Y5Z9 338 aa19.19■□□□□ 0.66
LTBR-215ENST00000546296 LRRC37A2A6NM11 1700 aa19.18■□□□□ 0.66
LTBR-215ENST00000546296 MOXD2PA6NHM9 499 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms