RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 XRRA1Q6P2D8 792 aa23.44■■□□□ 1.34
HMGA2-211ENST00000545998 BLIDQ8IZY5 108 aa23.44■■□□□ 1.34
HMGA2-211ENST00000545998 RASGRP4Q8TDF6 673 aa23.44■■□□□ 1.34
HMGA2-211ENST00000545998 ANO3Q9BYT9 981 aa23.44■■□□□ 1.34
HMGA2-211ENST00000545998 CRISPLD2Q9H0B8 497 aa23.44■■□□□ 1.34
HMGA2-211ENST00000545998 EHMT1Q9H9B1 1298 aa23.44■■□□□ 1.34
HMGA2-211ENST00000545998 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.43■■□□□ 1.34
HMGA2-211ENST00000545998 M0R2N6 131 aa23.43■■□□□ 1.34
HMGA2-211ENST00000545998 ADCY6O43306 1168 aa23.43■■□□□ 1.34
HMGA2-211ENST00000545998 ADCYAP1R1P41586 468 aa23.43■■□□□ 1.34
HMGA2-211ENST00000545998 IQSEC1Q6DN90 963 aa23.43■■□□□ 1.34
HMGA2-211ENST00000545998 K7ELQ4 463 aaPredicted RBP23.42■■□□□ 1.34
HMGA2-211ENST00000545998 RGS20O76081 388 aa23.42■■□□□ 1.34
HMGA2-211ENST00000545998 ANO1Q5XXA6 986 aa23.42■■□□□ 1.34
HMGA2-211ENST00000545998 LENG1Q96BZ8 264 aaPredicted RBP23.42■■□□□ 1.34
HMGA2-211ENST00000545998 STAM2O75886 525 aa23.41■■□□□ 1.34
HMGA2-211ENST00000545998 RARBP10826 455 aa23.41■■□□□ 1.34
HMGA2-211ENST00000545998 SREBF1P36956 1147 aa23.41■■□□□ 1.34
HMGA2-211ENST00000545998 SOX10P56693 466 aa23.41■■□□□ 1.34
HMGA2-211ENST00000545998 FAM184AQ8NB25 1140 aa23.41■■□□□ 1.34
HMGA2-211ENST00000545998 ZFP91Q96JP5 570 aaPredicted RBP23.41■■□□□ 1.34
HMGA2-211ENST00000545998 WDR11Q9BZH6 1224 aa23.41■■□□□ 1.34
HMGA2-211ENST00000545998 OGDHLQ9ULD0 1010 aa23.41■■□□□ 1.34
HMGA2-211ENST00000545998 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.41■■□□□ 1.34
HMGA2-211ENST00000545998 DUSP11O75319 330 aaKnown RBP23.4■■□□□ 1.34
HMGA2-211ENST00000545998 SMPD1P17405 629 aa23.4■■□□□ 1.34
HMGA2-211ENST00000545998 TNFAIP2Q03169 654 aa23.4■■□□□ 1.34
HMGA2-211ENST00000545998 TMEM63BQ5T3F8 832 aa23.4■■□□□ 1.34
HMGA2-211ENST00000545998 KRT40Q6A162 431 aa23.4■■□□□ 1.34
HMGA2-211ENST00000545998 SEPT14Q6ZU15 432 aa23.4■■□□□ 1.34
HMGA2-211ENST00000545998 SCFD2Q8WU76 684 aa23.4■■□□□ 1.34
HMGA2-211ENST00000545998 CRYGNQ8WXF5 182 aa23.4■■□□□ 1.34
HMGA2-211ENST00000545998 GNEQ9Y223 722 aaKnown RBP23.4■■□□□ 1.34
HMGA2-211ENST00000545998 TFRCP02786 760 aaKnown RBP23.4■■□□□ 1.34
HMGA2-211ENST00000545998 CAPN2P17655 700 aa23.4■■□□□ 1.34
HMGA2-211ENST00000545998 EN2P19622 333 aaPredicted RBP23.4■■□□□ 1.34
HMGA2-211ENST00000545998 FOSBP53539 338 aa23.4■■□□□ 1.34
HMGA2-211ENST00000545998 TRIM29Q14134 588 aa23.4■■□□□ 1.34
HMGA2-211ENST00000545998 C8orf76Q96K31 380 aa23.4■■□□□ 1.34
HMGA2-211ENST00000545998 INPP4AQ96PE3 977 aaPredicted RBP23.4■■□□□ 1.34
HMGA2-211ENST00000545998 ARIH2O95376 493 aa23.39■■□□□ 1.33
HMGA2-211ENST00000545998 MMP1P03956 469 aa23.39■■□□□ 1.33
HMGA2-211ENST00000545998 ARHGAP4P98171 946 aa23.39■■□□□ 1.33
HMGA2-211ENST00000545998 TTLL4Q14679 1199 aa23.39■■□□□ 1.33
HMGA2-211ENST00000545998 DUSP28Q4G0W2 176 aa23.39■■□□□ 1.33
HMGA2-211ENST00000545998 CCDC62Q6P9F0 684 aa23.39■■□□□ 1.33
HMGA2-211ENST00000545998 OXER1Q8TDS5 423 aa23.39■■□□□ 1.33
HMGA2-211ENST00000545998 XPNPEP3Q9NQH7 507 aa23.39■■□□□ 1.33
HMGA2-211ENST00000545998 RTEL1Q9NZ71 1219 aa23.39■■□□□ 1.33
HMGA2-211ENST00000545998 GJB2P29033 226 aa23.38■■□□□ 1.33
HMGA2-211ENST00000545998 HSCBQ8IWL3 235 aa23.38■■□□□ 1.33
HMGA2-211ENST00000545998 SMC3Q9UQE7 1217 aa23.38■■□□□ 1.33
HMGA2-211ENST00000545998 CYP3A4P08684 503 aa23.37■■□□□ 1.33
HMGA2-211ENST00000545998 PTGS1P23219 599 aa23.37■■□□□ 1.33
HMGA2-211ENST00000545998 KRT2P35908 639 aa23.37■■□□□ 1.33
HMGA2-211ENST00000545998 GNPTABQ3T906 1256 aa23.37■■□□□ 1.33
HMGA2-211ENST00000545998 GJC2Q5T442 439 aaPredicted RBP23.37■■□□□ 1.33
HMGA2-211ENST00000545998 FBXO18Q8NFZ0 1043 aa23.37■■□□□ 1.33
HMGA2-211ENST00000545998 KIF3AQ9Y496 699 aa23.37■■□□□ 1.33
HMGA2-211ENST00000545998 UBIAD1Q9Y5Z9 338 aa23.37■■□□□ 1.33
HMGA2-211ENST00000545998 SYNRGQ9UMZ2 1314 aa23.37■■□□□ 1.33
HMGA2-211ENST00000545998 PGK1P00558 417 aa23.36■■□□□ 1.33
HMGA2-211ENST00000545998 TXNP10599 105 aaKnown RBP23.36■■□□□ 1.33
HMGA2-211ENST00000545998 ITGB5P18084 799 aa23.36■■□□□ 1.33
HMGA2-211ENST00000545998 ICAM3P32942 547 aa23.36■■□□□ 1.33
HMGA2-211ENST00000545998 GUCY1B3Q02153 619 aa23.36■■□□□ 1.33
HMGA2-211ENST00000545998 INTS4Q96HW7 963 aaKnown RBP23.36■■□□□ 1.33
HMGA2-211ENST00000545998 UPF3AQ9H1J1 476 aaKnown RBP23.36■■□□□ 1.33
HMGA2-211ENST00000545998 BRMS1Q9HCU9 246 aa23.36■■□□□ 1.33
HMGA2-211ENST00000545998 DDX41Q9UJV9 622 aaKnown RBP23.36■■□□□ 1.33
HMGA2-211ENST00000545998 Q9Y3F1 56 aa23.36■■□□□ 1.33
HMGA2-211ENST00000545998 MRVI1Q9Y6F6 885 aa23.36■■□□□ 1.33
HMGA2-211ENST00000545998 NKRFO15226 690 aaKnown RBP eCLIP23.35■■□□□ 1.334e-8■□□□□ 8.1
HMGA2-211ENST00000545998 ADAMTS4O75173 837 aa23.35■■□□□ 1.33
HMGA2-211ENST00000545998 TGFB3P10600 412 aa23.35■■□□□ 1.33
HMGA2-211ENST00000545998 GJA9P57773 515 aa23.35■■□□□ 1.33
HMGA2-211ENST00000545998 SEMA3FQ13275 785 aa23.35■■□□□ 1.33
HMGA2-211ENST00000545998 LY6KQ17RY6 165 aa23.35■■□□□ 1.33
HMGA2-211ENST00000545998 KCNV1Q6PIU1 500 aa23.35■■□□□ 1.33
HMGA2-211ENST00000545998 KRT25Q7Z3Z0 450 aa23.35■■□□□ 1.33
HMGA2-211ENST00000545998 TLK2Q86UE8 772 aa23.35■■□□□ 1.33
HMGA2-211ENST00000545998 TNFRSF25Q93038 417 aa23.35■■□□□ 1.33
HMGA2-211ENST00000545998 SPATA31C2B4DYI2 1134 aa23.35■■□□□ 1.33
HMGA2-211ENST00000545998 EDIL3O43854 480 aa23.35■■□□□ 1.33
HMGA2-211ENST00000545998 MNX1P50219 401 aaPredicted RBP23.35■■□□□ 1.33
HMGA2-211ENST00000545998 NR5A1Q13285 461 aa23.35■■□□□ 1.33
HMGA2-211ENST00000545998 LRRC41Q15345 812 aa23.35■■□□□ 1.33
HMGA2-211ENST00000545998 NLRX1Q86UT6 975 aa23.35■■□□□ 1.33
HMGA2-211ENST00000545998 DIS3L2Q8IYB7 885 aaKnown RBP23.35■■□□□ 1.33
HMGA2-211ENST00000545998 ANKLE1Q8NAG6 615 aa23.35■■□□□ 1.33
HMGA2-211ENST00000545998 TBCKQ8TEA7 893 aa23.35■■□□□ 1.33
HMGA2-211ENST00000545998 COPS5Q92905 334 aa23.35■■□□□ 1.33
HMGA2-211ENST00000545998 GPRASP2Q96D09 838 aa23.35■■□□□ 1.33
HMGA2-211ENST00000545998 MXRA8Q9BRK3 442 aa23.35■■□□□ 1.33
HMGA2-211ENST00000545998 JADE2Q9NQC1 790 aa23.35■■□□□ 1.33
HMGA2-211ENST00000545998 DOCK5Q9H7D0 1870 aa23.34■■□□□ 1.33
HMGA2-211ENST00000545998 BTBD18B2RXH4 712 aa23.34■■□□□ 1.33
HMGA2-211ENST00000545998 FIBPO43427 364 aa23.34■■□□□ 1.33
HMGA2-211ENST00000545998 NKX3-2P78367 333 aa23.34■■□□□ 1.33
HMGA2-211ENST00000545998 NONOQ15233 471 aaKnown RBP eCLIP23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms