RNA–Protein interactions for RNA: ENST00000545930.5

DDB1-225, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,278 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-225ENST00000545930 AGBL1Q96MI9 1066 aa11.11□□□□□ -0.63
DDB1-225ENST00000545930 AIFM3Q96NN9 605 aa11.11□□□□□ -0.63
DDB1-225ENST00000545930 MROH8Q9H579 483 aa11.11□□□□□ -0.63
DDB1-225ENST00000545930 ACAD9Q9H845 621 aa11.11□□□□□ -0.63
DDB1-225ENST00000545930 RBPJLQ9UBG7 517 aa11.11□□□□□ -0.63
DDB1-225ENST00000545930 ZNF214Q9UL59 606 aaPredicted RBP11.11□□□□□ -0.63
DDB1-225ENST00000545930 ZNF536O15090 1300 aa11.1□□□□□ -0.63
DDB1-225ENST00000545930 GCOM1H8Y6P7 765 aaPredicted RBP11.1□□□□□ -0.63
DDB1-225ENST00000545930 PIK3CDO00329 1044 aa11.1□□□□□ -0.63
DDB1-225ENST00000545930 STRNO43815 780 aa11.1□□□□□ -0.63
DDB1-225ENST00000545930 PPP1R11O60927 126 aaPredicted RBP11.1□□□□□ -0.63
DDB1-225ENST00000545930 BRD1O95696 1058 aa11.1□□□□□ -0.63
DDB1-225ENST00000545930 POLR2MP0CAP2 368 aa11.1□□□□□ -0.63
DDB1-225ENST00000545930 U2AF2P26368 475 aaKnown RBP eCLIP11.1□□□□□ -0.63
DDB1-225ENST00000545930 DDIT3P35638 169 aa11.1□□□□□ -0.63
DDB1-225ENST00000545930 GUCY1B3Q02153 619 aa11.1□□□□□ -0.63
DDB1-225ENST00000545930 MAP2K1Q02750 393 aaPredicted RBP11.1□□□□□ -0.63
DDB1-225ENST00000545930 AP3B2Q13367 1082 aa11.1□□□□□ -0.63
DDB1-225ENST00000545930 ZNF697Q5TEC3 545 aa11.1□□□□□ -0.63
DDB1-225ENST00000545930 ATL3Q6DD88 541 aa11.1□□□□□ -0.63
DDB1-225ENST00000545930 DIS3L2Q8IYB7 885 aaKnown RBP11.1□□□□□ -0.63
DDB1-225ENST00000545930 REXO1Q8N1G1 1221 aaKnown RBP11.1□□□□□ -0.63
DDB1-225ENST00000545930 RNF146Q9NTX7 359 aa11.1□□□□□ -0.63
DDB1-225ENST00000545930 BTBD7Q9P203 1132 aa11.1□□□□□ -0.63
DDB1-225ENST00000545930 KCNJ14Q9UNX9 436 aa11.1□□□□□ -0.63
DDB1-225ENST00000545930 MTMR6Q9Y217 621 aa11.1□□□□□ -0.63
DDB1-225ENST00000545930 PFASO15067 1338 aa11.09□□□□□ -0.63
DDB1-225ENST00000545930 COL11A1P12107 1806 aaPredicted RBP11.09□□□□□ -0.63
DDB1-225ENST00000545930 CCDC194A0A1B0GVG4 234 aa11.09□□□□□ -0.63
DDB1-225ENST00000545930 SPDYE3A6NKU9 549 aa11.09□□□□□ -0.63
DDB1-225ENST00000545930 B4DLN1 442 aa11.09□□□□□ -0.63
DDB1-225ENST00000545930 AOC2O75106 756 aa11.09□□□□□ -0.63
DDB1-225ENST00000545930 CFBP00751 764 aa11.09□□□□□ -0.63
DDB1-225ENST00000545930 MAPK4P31152 587 aa11.09□□□□□ -0.63
DDB1-225ENST00000545930 GHRHRQ02643 423 aa11.09□□□□□ -0.63
DDB1-225ENST00000545930 ZNF787Q6DD87 383 aa11.09□□□□□ -0.63
DDB1-225ENST00000545930 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.09□□□□□ -0.63
DDB1-225ENST00000545930 KRT25Q7Z3Z0 450 aa11.09□□□□□ -0.63
DDB1-225ENST00000545930 NCAPG2Q86XI2 1143 aa11.09□□□□□ -0.63
DDB1-225ENST00000545930 ANKRD13CQ8N6S4 541 aa11.09□□□□□ -0.63
DDB1-225ENST00000545930 MPHOSPH6Q99547 160 aaKnown RBP11.09□□□□□ -0.63
DDB1-225ENST00000545930 SPSB2Q99619 263 aa11.09□□□□□ -0.63
DDB1-225ENST00000545930 NAP1L4Q99733 375 aaKnown RBP11.09□□□□□ -0.63
DDB1-225ENST00000545930 BEGAINQ9BUH8 593 aa11.09□□□□□ -0.63
DDB1-225ENST00000545930 CFHR5Q9BXR6 569 aa11.09□□□□□ -0.63
DDB1-225ENST00000545930 NOL7Q9UMY1 257 aaKnown RBP11.09□□□□□ -0.63
DDB1-225ENST00000545930 IVNS1ABPQ9Y6Y0 642 aa11.09□□□□□ -0.63
DDB1-225ENST00000545930 BTBD18B2RXH4 712 aa11.08□□□□□ -0.64
DDB1-225ENST00000545930 DTNBO60941 627 aa11.08□□□□□ -0.64
DDB1-225ENST00000545930 CNMDO75829 334 aa11.08□□□□□ -0.64
DDB1-225ENST00000545930 F13A1P00488 732 aa11.08□□□□□ -0.64
DDB1-225ENST00000545930 FCER1AP12319 257 aa11.08□□□□□ -0.64
DDB1-225ENST00000545930 ERCC3P19447 782 aa11.08□□□□□ -0.64
DDB1-225ENST00000545930 TRAPPC10P48553 1259 aa11.08□□□□□ -0.64
DDB1-225ENST00000545930 KIF22Q14807 665 aa11.08□□□□□ -0.64
DDB1-225ENST00000545930 ARHGEF6Q15052 776 aa11.08□□□□□ -0.64
DDB1-225ENST00000545930 NONOQ15233 471 aaKnown RBP eCLIP11.08□□□□□ -0.64
DDB1-225ENST00000545930 RNF207Q6ZRF8 634 aa11.08□□□□□ -0.64
DDB1-225ENST00000545930 NOSTRINQ8IVI9 506 aa11.08□□□□□ -0.64
DDB1-225ENST00000545930 ABRAQ8N0Z2 381 aa11.08□□□□□ -0.64
DDB1-225ENST00000545930 ANKRD35Q8N283 1001 aa11.08□□□□□ -0.64
DDB1-225ENST00000545930 ZNF396Q96N95 335 aaPredicted RBP11.08□□□□□ -0.64
DDB1-225ENST00000545930 MOV10L1Q9BXT6 1211 aaKnown RBP11.08□□□□□ -0.64
DDB1-225ENST00000545930 SLC5A4Q9NY91 659 aa11.08□□□□□ -0.64
DDB1-225ENST00000545930 SMCHD1A6NHR9 2005 aa11.08□□□□□ -0.64
DDB1-225ENST00000545930 MEIS2O14770 477 aa11.07□□□□□ -0.64
DDB1-225ENST00000545930 BCRP11274 1271 aa11.07□□□□□ -0.64
DDB1-225ENST00000545930 CLK2P49760 499 aaKnown RBP11.07□□□□□ -0.64
DDB1-225ENST00000545930 HSD17B4P51659 736 aa11.07□□□□□ -0.64
DDB1-225ENST00000545930 CRHR2Q13324 411 aa11.07□□□□□ -0.64
DDB1-225ENST00000545930 KCTD2Q14681 263 aa11.07□□□□□ -0.64
DDB1-225ENST00000545930 Q3C1V9 767 aa11.07□□□□□ -0.64
DDB1-225ENST00000545930 RILPL1Q5EBL4 403 aa11.07□□□□□ -0.64
DDB1-225ENST00000545930 MUM1L1Q5H9M0 696 aa11.07□□□□□ -0.64
DDB1-225ENST00000545930 WDR78Q5VTH9 848 aa11.07□□□□□ -0.64
DDB1-225ENST00000545930 C17orf99Q6UX52 265 aa11.07□□□□□ -0.64
DDB1-225ENST00000545930 NSMFQ6X4W1 530 aa11.07□□□□□ -0.64
DDB1-225ENST00000545930 LIAT1Q6ZQX7 453 aa11.07□□□□□ -0.64
DDB1-225ENST00000545930 RDH13Q8NBN7 331 aa11.07□□□□□ -0.64
DDB1-225ENST00000545930 DNERQ8NFT8 737 aa11.07□□□□□ -0.64
DDB1-225ENST00000545930 CLEC4DQ8WXI8 215 aa11.07□□□□□ -0.64
DDB1-225ENST00000545930 ZIC5Q96T25 663 aa11.07□□□□□ -0.64
DDB1-225ENST00000545930 TXNRD2Q9NNW7 524 aa11.07□□□□□ -0.64
DDB1-225ENST00000545930 HOMER2Q9NSB8 354 aa11.07□□□□□ -0.64
DDB1-225ENST00000545930 SAGE1Q9NXZ1 904 aa11.07□□□□□ -0.64
DDB1-225ENST00000545930 BIN2Q9UBW5 565 aaPredicted RBP11.07□□□□□ -0.64
DDB1-225ENST00000545930 ADD3Q9UEY8 706 aaKnown RBP11.07□□□□□ -0.64
DDB1-225ENST00000545930 CPA4Q9UI42 421 aa11.07□□□□□ -0.64
DDB1-225ENST00000545930 CFAP45Q9UL16 551 aa11.07□□□□□ -0.64
DDB1-225ENST00000545930 PCDHA6Q9UN73 950 aa11.07□□□□□ -0.64
DDB1-225ENST00000545930 RIPK3Q9Y572 518 aa11.07□□□□□ -0.64
DDB1-225ENST00000545930 PCDHA8Q9Y5H6 950 aa11.07□□□□□ -0.64
DDB1-225ENST00000545930 LOC102724159A0A0B4J2E5 919 aa11.06□□□□□ -0.64
DDB1-225ENST00000545930 GPR37O15354 613 aa11.06□□□□□ -0.64
DDB1-225ENST00000545930 BMP15O95972 392 aa11.06□□□□□ -0.64
DDB1-225ENST00000545930 USP11P51784 963 aa11.06□□□□□ -0.64
DDB1-225ENST00000545930 PWP2Q15269 919 aaKnown RBP11.06□□□□□ -0.64
DDB1-225ENST00000545930 CSPP1Q1MSJ5 1256 aa11.06□□□□□ -0.64
DDB1-225ENST00000545930 USP17L6PQ6QN14 398 aa11.06□□□□□ -0.64
DDB1-225ENST00000545930 MMP19Q99542 508 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms