RNA–Protein interactions for RNA: ENST00000545870.1

PRKAB1-209, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 3

Gene PRKAB1, Length 566 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-209ENST00000545870 EDIL3O43854 480 aa9.28□□□□□ -0.92
PRKAB1-209ENST00000545870 MARCH6O60337 910 aa9.28□□□□□ -0.92
PRKAB1-209ENST00000545870 PPP1R11O60927 126 aaPredicted RBP9.28□□□□□ -0.92
PRKAB1-209ENST00000545870 ZRANB2O95218 330 aaKnown RBP eCLIP9.28□□□□□ -0.92
PRKAB1-209ENST00000545870 TDP2O95551 362 aa9.28□□□□□ -0.92
PRKAB1-209ENST00000545870 MMP10P09238 476 aa9.28□□□□□ -0.92
PRKAB1-209ENST00000545870 MMP14P50281 582 aa9.28□□□□□ -0.92
PRKAB1-209ENST00000545870 CLCN6P51797 869 aa9.28□□□□□ -0.92
PRKAB1-209ENST00000545870 CHMP4BP1P59074 171 aa9.28□□□□□ -0.92
PRKAB1-209ENST00000545870 CBX1P83916 185 aa9.28□□□□□ -0.92
PRKAB1-209ENST00000545870 DMTNQ08495 405 aa9.28□□□□□ -0.92
PRKAB1-209ENST00000545870 MAN2A1Q16706 1144 aa9.28□□□□□ -0.92
PRKAB1-209ENST00000545870 KIF4BQ2VIQ3 1234 aa9.28□□□□□ -0.92
PRKAB1-209ENST00000545870 CERKLQ49MI3 558 aaPredicted RBP9.28□□□□□ -0.92
PRKAB1-209ENST00000545870 VWA3BQ502W6 1294 aa9.28□□□□□ -0.92
PRKAB1-209ENST00000545870 ZNF569Q5MCW4 686 aa9.28□□□□□ -0.92
PRKAB1-209ENST00000545870 SLFN13Q68D06 897 aa9.28□□□□□ -0.92
PRKAB1-209ENST00000545870 C2CD5Q86YS7 1000 aa9.28□□□□□ -0.92
PRKAB1-209ENST00000545870 PLCD3Q8N3E9 789 aa9.28□□□□□ -0.92
PRKAB1-209ENST00000545870 KIAA0895Q8NCT3 520 aa9.28□□□□□ -0.92
PRKAB1-209ENST00000545870 CNKSR1Q969H4 720 aa9.28□□□□□ -0.92
PRKAB1-209ENST00000545870 CEP63Q96MT8 703 aa9.28□□□□□ -0.92
PRKAB1-209ENST00000545870 PLIN2Q99541 437 aa9.28□□□□□ -0.92
PRKAB1-209ENST00000545870 EIF3CQ99613 913 aaKnown RBP9.28□□□□□ -0.92
PRKAB1-209ENST00000545870 NUCKS1Q9H1E3 243 aaKnown RBP9.28□□□□□ -0.92
PRKAB1-209ENST00000545870 COL11A2P13942 1736 aaPredicted RBP9.28□□□□□ -0.92
PRKAB1-209ENST00000545870 CCDC151A5D8V7 595 aa9.27□□□□□ -0.93
PRKAB1-209ENST00000545870 RNF225M0QZC1 329 aaPredicted RBP9.27□□□□□ -0.93
PRKAB1-209ENST00000545870 COBLO75128 1261 aa9.27□□□□□ -0.93
PRKAB1-209ENST00000545870 TRIM21P19474 475 aaKnown RBP9.27□□□□□ -0.93
PRKAB1-209ENST00000545870 SLC1A4P43007 532 aa9.27□□□□□ -0.93
PRKAB1-209ENST00000545870 SCNN1DP51172 638 aa9.27□□□□□ -0.93
PRKAB1-209ENST00000545870 NFIAQ12857 509 aa9.27□□□□□ -0.93
PRKAB1-209ENST00000545870 MCM6Q14566 821 aa9.27□□□□□ -0.93
PRKAB1-209ENST00000545870 QRICH1Q2TAL8 776 aa9.27□□□□□ -0.93
PRKAB1-209ENST00000545870 Q4G0T1 1027 aa9.27□□□□□ -0.93
PRKAB1-209ENST00000545870 MIIPQ5JXC2 388 aa9.27□□□□□ -0.93
PRKAB1-209ENST00000545870 HAUS3Q68CZ6 603 aa9.27□□□□□ -0.93
PRKAB1-209ENST00000545870 BTNL9Q6UXG8 535 aa9.27□□□□□ -0.93
PRKAB1-209ENST00000545870 CCDC65Q8IXS2 484 aa9.27□□□□□ -0.93
PRKAB1-209ENST00000545870 MYOCDQ8IZQ8 938 aa9.27□□□□□ -0.93
PRKAB1-209ENST00000545870 SLC35F6Q8N357 371 aa9.27□□□□□ -0.93
PRKAB1-209ENST00000545870 MSL3Q8N5Y2 521 aaKnown RBP9.27□□□□□ -0.93
PRKAB1-209ENST00000545870 LRRN4CLQ8ND94 238 aa9.27□□□□□ -0.93
PRKAB1-209ENST00000545870 ACRBPQ8NEB7 543 aa9.27□□□□□ -0.93
PRKAB1-209ENST00000545870 ERMNQ8TAM6 284 aa9.27□□□□□ -0.93
PRKAB1-209ENST00000545870 HNRNPLLQ8WVV9 542 aaKnown RBP9.27□□□□□ -0.93
PRKAB1-209ENST00000545870 HAS1Q92839 578 aa9.27□□□□□ -0.93
PRKAB1-209ENST00000545870 RPGRIP1Q96KN7 1286 aa9.27□□□□□ -0.93
PRKAB1-209ENST00000545870 FAM20AQ96MK3 541 aa9.27□□□□□ -0.93
PRKAB1-209ENST00000545870 SLF1Q9BQI6 1058 aa9.27□□□□□ -0.93
PRKAB1-209ENST00000545870 AMNQ9BXJ7 453 aa9.27□□□□□ -0.93
PRKAB1-209ENST00000545870 GBP3Q9H0R5 595 aa9.27□□□□□ -0.93
PRKAB1-209ENST00000545870 SEMA6BQ9H3T3 888 aa9.27□□□□□ -0.93
PRKAB1-209ENST00000545870 KCNMB3Q9NPA1 279 aa9.27□□□□□ -0.93
PRKAB1-209ENST00000545870 ZNF446Q9NWS9 450 aa9.27□□□□□ -0.93
PRKAB1-209ENST00000545870 PCDHA12Q9UN75 941 aa9.27□□□□□ -0.93
PRKAB1-209ENST00000545870 PCDHA1Q9Y5I3 950 aa9.27□□□□□ -0.93
PRKAB1-209ENST00000545870 PITPNM2Q9BZ72 1349 aa9.27□□□□□ -0.93
PRKAB1-209ENST00000545870 RGPD3A6NKT7 1758 aaPredicted RBP9.27□□□□□ -0.93
PRKAB1-209ENST00000545870 RGPD4Q7Z3J3 1758 aa9.27□□□□□ -0.93
PRKAB1-209ENST00000545870 BAZ2BQ9UIF8 2168 aaKnown RBP9.26□□□□□ -0.93
PRKAB1-209ENST00000545870 ANO9A1A5B4 782 aa9.26□□□□□ -0.93
PRKAB1-209ENST00000545870 PES1O00541 588 aaKnown RBP9.26□□□□□ -0.93
PRKAB1-209ENST00000545870 KRT86O43790 486 aa9.26□□□□□ -0.93
PRKAB1-209ENST00000545870 ECE2O60344 883 aa9.26□□□□□ -0.93
PRKAB1-209ENST00000545870 ERLIN1O75477 346 aa9.26□□□□□ -0.93
PRKAB1-209ENST00000545870 FCER1AP12319 257 aa9.26□□□□□ -0.93
PRKAB1-209ENST00000545870 EEF2P13639 858 aaKnown RBP9.26□□□□□ -0.93
PRKAB1-209ENST00000545870 ZSCAN20P17040 1043 aaPredicted RBP9.26□□□□□ -0.93
PRKAB1-209ENST00000545870 MCM3P25205 808 aa9.26□□□□□ -0.93
PRKAB1-209ENST00000545870 EIF6P56537 245 aaKnown RBP9.26□□□□□ -0.93
PRKAB1-209ENST00000545870 FKBP3Q00688 224 aaKnown RBP9.26□□□□□ -0.93
PRKAB1-209ENST00000545870 ATP2B2Q01814 1243 aa9.26□□□□□ -0.93
PRKAB1-209ENST00000545870 ICA1Q05084 483 aa9.26□□□□□ -0.93
PRKAB1-209ENST00000545870 CDC37Q16543 378 aaPredicted RBP9.26□□□□□ -0.93
PRKAB1-209ENST00000545870 UBE2SQ16763 222 aa9.26□□□□□ -0.93
PRKAB1-209ENST00000545870 ABCB5Q2M3G0 1257 aa9.26□□□□□ -0.93
PRKAB1-209ENST00000545870 ZCWPW2Q504Y3 356 aa9.26□□□□□ -0.93
PRKAB1-209ENST00000545870 ZNF772Q68DY9 489 aaPredicted RBP9.26□□□□□ -0.93
PRKAB1-209ENST00000545870 TTBK2Q6IQ55 1244 aa9.26□□□□□ -0.93
PRKAB1-209ENST00000545870 WDR59Q6PJI9 974 aa9.26□□□□□ -0.93
PRKAB1-209ENST00000545870 LRRC55Q6ZSA7 311 aa9.26□□□□□ -0.93
PRKAB1-209ENST00000545870 ZC3H3Q8IXZ2 948 aaKnown RBP9.26□□□□□ -0.93
PRKAB1-209ENST00000545870 MSANTD4Q8NCY6 345 aa9.26□□□□□ -0.93
PRKAB1-209ENST00000545870 CRYGNQ8WXF5 182 aa9.26□□□□□ -0.93
PRKAB1-209ENST00000545870 DDX12PQ92771 950 aa9.26□□□□□ -0.93
PRKAB1-209ENST00000545870 SYN2Q92777 582 aaPredicted RBP9.26□□□□□ -0.93
PRKAB1-209ENST00000545870 DNAJC19Q96DA6 116 aa9.26□□□□□ -0.93
PRKAB1-209ENST00000545870 ANO3Q9BYT9 981 aa9.26□□□□□ -0.93
PRKAB1-209ENST00000545870 NDST4Q9H3R1 872 aa9.26□□□□□ -0.93
PRKAB1-209ENST00000545870 DNAJC18Q9H819 358 aa9.26□□□□□ -0.93
PRKAB1-209ENST00000545870 ARFGAP3Q9NP61 516 aa9.26□□□□□ -0.93
PRKAB1-209ENST00000545870 SLC39A2Q9NP94 309 aa9.26□□□□□ -0.93
PRKAB1-209ENST00000545870 FAM198AQ9UFP1 575 aa9.26□□□□□ -0.93
PRKAB1-209ENST00000545870 HERC5Q9UII4 1024 aaKnown RBP9.26□□□□□ -0.93
PRKAB1-209ENST00000545870 RAB21Q9UL25 225 aa9.26□□□□□ -0.93
PRKAB1-209ENST00000545870 SIK3Q9Y2K2 1263 aa9.26□□□□□ -0.93
PRKAB1-209ENST00000545870 REXO2Q9Y3B8 237 aaKnown RBP9.26□□□□□ -0.93
PRKAB1-209ENST00000545870 FHOD1Q9Y613 1164 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms