RNA–Protein interactions for RNA: ENST00000544999.2

HOXD8-204, Transcript of homeobox D8, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HOXD8, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8-204ENST00000544999 TCEANC2Q96MN5 208 aa19.55■□□□□ 0.72
HOXD8-204ENST00000544999 MTG1Q9BT17 334 aaPredicted RBP19.55■□□□□ 0.72
HOXD8-204ENST00000544999 RBM28Q9NW13 759 aaKnown RBP19.55■□□□□ 0.72
HOXD8-204ENST00000544999 CENPBP07199 599 aaPredicted RBP19.54■□□□□ 0.72
HOXD8-204ENST00000544999 MYCLP12524 364 aaPredicted RBP19.54■□□□□ 0.72
HOXD8-204ENST00000544999 PSMC6P62333 389 aa19.54■□□□□ 0.72
HOXD8-204ENST00000544999 VSIG10LQ86VR7 867 aa19.54■□□□□ 0.72
HOXD8-204ENST00000544999 FCHSD1Q86WN1 690 aa19.54■□□□□ 0.72
HOXD8-204ENST00000544999 CMTR1Q8N1G2 835 aaKnown RBP19.54■□□□□ 0.72
HOXD8-204ENST00000544999 DDX41Q9UJV9 622 aaKnown RBP19.54■□□□□ 0.72
HOXD8-204ENST00000544999 MRVI1Q9Y6F6 885 aa19.54■□□□□ 0.72
HOXD8-204ENST00000544999 SCN10AQ9Y5Y9 1956 aa19.53■□□□□ 0.72
HOXD8-204ENST00000544999 FRMPD4Q14CM0 1322 aa19.53■□□□□ 0.72
HOXD8-204ENST00000544999 DNAH12Q6ZR08 3092 aa19.53■□□□□ 0.72
HOXD8-204ENST00000544999 EPB41L2O43491 1005 aaKnown RBP19.53■□□□□ 0.72
HOXD8-204ENST00000544999 CCND2P30279 289 aa19.53■□□□□ 0.72
HOXD8-204ENST00000544999 FPGSQ05932 587 aa19.53■□□□□ 0.72
HOXD8-204ENST00000544999 ARHGAP1Q07960 439 aa19.53■□□□□ 0.72
HOXD8-204ENST00000544999 GPR153Q6NV75 609 aa19.53■□□□□ 0.72
HOXD8-204ENST00000544999 KCNV1Q6PIU1 500 aa19.53■□□□□ 0.72
HOXD8-204ENST00000544999 IL31RAQ8NI17 732 aa19.53■□□□□ 0.72
HOXD8-204ENST00000544999 CUL5Q93034 780 aa19.53■□□□□ 0.72
HOXD8-204ENST00000544999 SNX14Q9Y5W7 946 aa19.53■□□□□ 0.72
HOXD8-204ENST00000544999 PIK3CDO00329 1044 aa19.52■□□□□ 0.72
HOXD8-204ENST00000544999 ZBTB43O43298 467 aa19.52■□□□□ 0.72
HOXD8-204ENST00000544999 RGS20O76081 388 aa19.52■□□□□ 0.72
HOXD8-204ENST00000544999 RCAN1P53805 252 aa19.52■□□□□ 0.72
HOXD8-204ENST00000544999 SHHQ15465 462 aa19.52■□□□□ 0.72
HOXD8-204ENST00000544999 MFSD5Q6N075 450 aa19.52■□□□□ 0.72
HOXD8-204ENST00000544999 SMARCC2Q8TAQ2 1214 aa19.52■□□□□ 0.72
HOXD8-204ENST00000544999 EMID1Q96A84 441 aaPredicted RBP19.52■□□□□ 0.72
HOXD8-204ENST00000544999 JAKMIP1Q96N16 626 aaKnown RBP19.52■□□□□ 0.72
HOXD8-204ENST00000544999 BRPF3Q9ULD4 1205 aa19.52■□□□□ 0.72
HOXD8-204ENST00000544999 B4GALT4O60513 344 aa19.51■□□□□ 0.71
HOXD8-204ENST00000544999 MMP3P08254 477 aa19.51■□□□□ 0.71
HOXD8-204ENST00000544999 RTN1Q16799 776 aa19.51■□□□□ 0.71
HOXD8-204ENST00000544999 C9orf50Q5SZB4 431 aa19.51■□□□□ 0.71
HOXD8-204ENST00000544999 BLOC1S2Q6QNY1 142 aa19.51■□□□□ 0.71
HOXD8-204ENST00000544999 CCDC82Q8N4S0 544 aa19.51■□□□□ 0.71
HOXD8-204ENST00000544999 AFG1LQ8WV93 481 aa19.51■□□□□ 0.71
HOXD8-204ENST00000544999 ALDH8A1Q9H2A2 487 aaPredicted RBP19.51■□□□□ 0.71
HOXD8-204ENST00000544999 CNTNAP5Q8WYK1 1306 aa19.51■□□□□ 0.71
HOXD8-204ENST00000544999 RANBP2P49792 3224 aaKnown RBP19.5■□□□□ 0.71
HOXD8-204ENST00000544999 KLF18A0A0U1RQI7 1052 aa19.5■□□□□ 0.71
HOXD8-204ENST00000544999 GOLGA8AA7E2F4 631 aa19.5■□□□□ 0.71
HOXD8-204ENST00000544999 GOLGA8BA8MQT2 603 aa19.5■□□□□ 0.71
HOXD8-204ENST00000544999 MEIS2O14770 477 aa19.5■□□□□ 0.71
HOXD8-204ENST00000544999 STAM2O75886 525 aa19.5■□□□□ 0.71
HOXD8-204ENST00000544999 TGFB3P10600 412 aa19.5■□□□□ 0.71
HOXD8-204ENST00000544999 FGD1P98174 961 aa19.5■□□□□ 0.71
HOXD8-204ENST00000544999 PPIGQ13427 754 aaKnown RBP eCLIP19.5■□□□□ 0.71
HOXD8-204ENST00000544999 LAMC2Q13753 1193 aa19.5■□□□□ 0.71
HOXD8-204ENST00000544999 NFRKBQ6P4R8 1299 aa19.5■□□□□ 0.71
HOXD8-204ENST00000544999 USP17L6PQ6QN14 398 aa19.5■□□□□ 0.71
HOXD8-204ENST00000544999 PPP1R12CQ9BZL4 782 aa19.5■□□□□ 0.71
HOXD8-204ENST00000544999 MYH7BA7E2Y1 1941 aa19.5■□□□□ 0.71
HOXD8-204ENST00000544999 hCG_1642624A0A1W2PR95 340 aa19.49■□□□□ 0.71
HOXD8-204ENST00000544999 SUPT20HL2P0C7V6 817 aa19.49■□□□□ 0.71
HOXD8-204ENST00000544999 CPA1P15085 419 aa19.49■□□□□ 0.71
HOXD8-204ENST00000544999 CASTP20810 708 aaKnown RBP19.49■□□□□ 0.71
HOXD8-204ENST00000544999 PSMA5P28066 241 aa19.49■□□□□ 0.71
HOXD8-204ENST00000544999 EPHB4P54760 987 aa19.49■□□□□ 0.71
HOXD8-204ENST00000544999 PTPN11Q06124 597 aaPredicted RBP19.49■□□□□ 0.71
HOXD8-204ENST00000544999 NBPF20Q3BBV1 942 aa19.49■□□□□ 0.71
HOXD8-204ENST00000544999 Q6ZUG5 572 aa19.49■□□□□ 0.71
HOXD8-204ENST00000544999 DHX37Q8IY37 1157 aaKnown RBP19.49■□□□□ 0.71
HOXD8-204ENST00000544999 FBXL16Q8N461 479 aa19.49■□□□□ 0.71
HOXD8-204ENST00000544999 TMEM199Q8N511 208 aa19.49■□□□□ 0.71
HOXD8-204ENST00000544999 PPTC7Q8NI37 304 aa19.49■□□□□ 0.71
HOXD8-204ENST00000544999 TRPV6Q9H1D0 765 aa19.49■□□□□ 0.71
HOXD8-204ENST00000544999 HIPK3Q9H422 1215 aa19.49■□□□□ 0.71
HOXD8-204ENST00000544999 PSTPIP2Q9H939 334 aa19.49■□□□□ 0.71
HOXD8-204ENST00000544999 RPS6KB1P23443 525 aa19.48■□□□□ 0.71
HOXD8-204ENST00000544999 MRPS9P82933 396 aaKnown RBP19.48■□□□□ 0.71
HOXD8-204ENST00000544999 FUT2Q10981 343 aa19.48■□□□□ 0.71
HOXD8-204ENST00000544999 DGKDQ16760 1214 aa19.48■□□□□ 0.71
HOXD8-204ENST00000544999 GNPTABQ3T906 1256 aa19.48■□□□□ 0.71
HOXD8-204ENST00000544999 XRRA1Q6P2D8 792 aa19.48■□□□□ 0.71
HOXD8-204ENST00000544999 INPP4AQ96PE3 977 aaPredicted RBP19.48■□□□□ 0.71
HOXD8-204ENST00000544999 FAM217BQ9NTX9 383 aaPredicted RBP19.48■□□□□ 0.71
HOXD8-204ENST00000544999 GGPS1O95749 300 aa19.47■□□□□ 0.71
HOXD8-204ENST00000544999 UBA1P22314 1058 aaKnown RBP19.47■□□□□ 0.71
HOXD8-204ENST00000544999 CDC27P30260 824 aa19.47■□□□□ 0.71
HOXD8-204ENST00000544999 ICAM3P32942 547 aa19.47■□□□□ 0.71
HOXD8-204ENST00000544999 CYP2C18P33260 490 aa19.47■□□□□ 0.71
HOXD8-204ENST00000544999 APOBRQ0VD83 1088 aa19.47■□□□□ 0.71
HOXD8-204ENST00000544999 FAM47CQ5HY64 1035 aa19.47■□□□□ 0.71
HOXD8-204ENST00000544999 CELF3Q5SZQ8 465 aaKnown RBP19.47■□□□□ 0.71
HOXD8-204ENST00000544999 MYSM1Q5VVJ2 828 aa19.47■□□□□ 0.71
HOXD8-204ENST00000544999 PCNX4Q63HM2 1172 aa19.47■□□□□ 0.71
HOXD8-204ENST00000544999 HEATR3Q7Z4Q2 680 aa19.47■□□□□ 0.71
HOXD8-204ENST00000544999 ZFP91Q96JP5 570 aaPredicted RBP19.47■□□□□ 0.71
HOXD8-204ENST00000544999 NOC4LQ9BVI4 516 aaKnown RBP19.47■□□□□ 0.71
HOXD8-204ENST00000544999 AGXT2Q9BYV1 514 aa19.47■□□□□ 0.71
HOXD8-204ENST00000544999 TRMT13Q9NUP7 481 aaKnown RBP19.47■□□□□ 0.71
HOXD8-204ENST00000544999 NAP1L2Q9ULW6 460 aaPredicted RBP19.47■□□□□ 0.71
HOXD8-204ENST00000544999 NID2Q14112 1375 aa19.46■□□□□ 0.71
HOXD8-204ENST00000544999 CCDC196A0A1B0GTZ2 297 aa19.46■□□□□ 0.71
HOXD8-204ENST00000544999 hCG_1984214I3L0E3 225 aa19.46■□□□□ 0.71
HOXD8-204ENST00000544999 HOXD8P13378 290 aaPredicted RBP19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms