RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 PTPDC1A2A3K4 754 aa18.93■□□□□ 0.62
DDX55-212ENST00000544738 NFIBO00712 420 aa18.93■□□□□ 0.62
DDX55-212ENST00000544738 KCNJ6P48051 423 aa18.93■□□□□ 0.62
DDX55-212ENST00000544738 TMCO2Q7Z6W1 182 aaPredicted RBP18.93■□□□□ 0.62
DDX55-212ENST00000544738 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.93■□□□□ 0.62
DDX55-212ENST00000544738 MPHOSPH6Q99547 160 aaKnown RBP18.93■□□□□ 0.62
DDX55-212ENST00000544738 VTA1Q9NP79 307 aa18.93■□□□□ 0.62
DDX55-212ENST00000544738 POLR3EQ9NVU0 708 aa18.93■□□□□ 0.62
DDX55-212ENST00000544738 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.92■□□□□ 0.62
DDX55-212ENST00000544738 GOLGA8HP0CJ92 632 aa18.92■□□□□ 0.62
DDX55-212ENST00000544738 IL9P15248 144 aa18.92■□□□□ 0.62
DDX55-212ENST00000544738 NBPF20Q3BBV1 942 aa18.92■□□□□ 0.62
DDX55-212ENST00000544738 LEXMQ3ZCV2 418 aa18.92■□□□□ 0.62
DDX55-212ENST00000544738 ASPRV1Q53RT3 343 aa18.92■□□□□ 0.62
DDX55-212ENST00000544738 RNF207Q6ZRF8 634 aa18.92■□□□□ 0.62
DDX55-212ENST00000544738 ENAHQ8N8S7 591 aaPredicted RBP18.92■□□□□ 0.62
DDX55-212ENST00000544738 MAF1Q9H063 256 aa18.92■□□□□ 0.62
DDX55-212ENST00000544738 SCN5AQ14524 2016 aa18.91■□□□□ 0.62
DDX55-212ENST00000544738 B4DLN1 442 aa18.91■□□□□ 0.62
DDX55-212ENST00000544738 CHMLP26374 656 aa18.91■□□□□ 0.62
DDX55-212ENST00000544738 ALDH5A1P51649 535 aaPredicted RBP18.91■□□□□ 0.62
DDX55-212ENST00000544738 MRPL12P52815 198 aaKnown RBP18.91■□□□□ 0.62
DDX55-212ENST00000544738 PURAQ00577 322 aaKnown RBP18.91■□□□□ 0.62
DDX55-212ENST00000544738 TRDNQ13061 729 aa18.91■□□□□ 0.62
DDX55-212ENST00000544738 PTCRAQ6ISU1 281 aaPredicted RBP18.91■□□□□ 0.62
DDX55-212ENST00000544738 RGS22Q8NE09 1264 aa18.91■□□□□ 0.62
DDX55-212ENST00000544738 CLEC4DQ8WXI8 215 aa18.91■□□□□ 0.62
DDX55-212ENST00000544738 MTG1Q9BT17 334 aaPredicted RBP18.91■□□□□ 0.62
DDX55-212ENST00000544738 UBA5Q9GZZ9 404 aa18.91■□□□□ 0.62
DDX55-212ENST00000544738 IL25Q9H293 177 aa18.91■□□□□ 0.62
DDX55-212ENST00000544738 SUGCTQ9HAC7 445 aa18.91■□□□□ 0.62
DDX55-212ENST00000544738 U3KPZ7 1027 aaPredicted RBP18.91■□□□□ 0.62
DDX55-212ENST00000544738 CHMP4BP1P59074 171 aa18.9■□□□□ 0.62
DDX55-212ENST00000544738 DUSP28Q4G0W2 176 aa18.9■□□□□ 0.62
DDX55-212ENST00000544738 DNERQ8NFT8 737 aa18.9■□□□□ 0.62
DDX55-212ENST00000544738 PURBQ96QR8 312 aaKnown RBP18.9■□□□□ 0.62
DDX55-212ENST00000544738 WDR11Q9BZH6 1224 aa18.9■□□□□ 0.62
DDX55-212ENST00000544738 NOD1Q9Y239 953 aa18.9■□□□□ 0.62
DDX55-212ENST00000544738 PITPNM1O00562 1244 aa18.89■□□□□ 0.61
DDX55-212ENST00000544738 BAIAP3O94812 1187 aa18.89■□□□□ 0.61
DDX55-212ENST00000544738 PARP1P09874 1014 aaKnown RBP18.89■□□□□ 0.61
DDX55-212ENST00000544738 CALML3P27482 149 aa18.89■□□□□ 0.61
DDX55-212ENST00000544738 CPT1AP50416 773 aa18.89■□□□□ 0.61
DDX55-212ENST00000544738 RPS6P62753 249 aaKnown RBP18.89■□□□□ 0.61
DDX55-212ENST00000544738 BFSP2Q13515 415 aa18.89■□□□□ 0.61
DDX55-212ENST00000544738 IFIT1BQ5T764 474 aaKnown RBP18.89■□□□□ 0.61
DDX55-212ENST00000544738 DCXO43602 365 aa18.88■□□□□ 0.61
DDX55-212ENST00000544738 PDE4DQ08499 809 aa18.88■□□□□ 0.61
DDX55-212ENST00000544738 CDC37Q16543 378 aaPredicted RBP18.88■□□□□ 0.61
DDX55-212ENST00000544738 USH1GQ495M9 461 aa18.88■□□□□ 0.61
DDX55-212ENST00000544738 SLC30A10Q6XR72 485 aa18.88■□□□□ 0.61
DDX55-212ENST00000544738 ADGRF4Q8IZF3 695 aa18.88■□□□□ 0.61
DDX55-212ENST00000544738 OR6J1Q8NGC5 347 aa18.88■□□□□ 0.61
DDX55-212ENST00000544738 TGS1Q96RS0 853 aaKnown RBP18.88■□□□□ 0.61
DDX55-212ENST00000544738 ABCB11O95342 1321 aa18.88■□□□□ 0.61
DDX55-212ENST00000544738 GRXCR2A6NFK2 248 aa18.87■□□□□ 0.61
DDX55-212ENST00000544738 DHX16O60231 1041 aaKnown RBP18.87■□□□□ 0.61
DDX55-212ENST00000544738 WDR5P61964 334 aaKnown RBP18.87■□□□□ 0.61
DDX55-212ENST00000544738 BRDTQ58F21 947 aaPredicted RBP18.87■□□□□ 0.61
DDX55-212ENST00000544738 MCF2L2Q86YR7 1114 aa18.87■□□□□ 0.61
DDX55-212ENST00000544738 TET1Q8NFU7 2136 aa18.87■□□□□ 0.61
DDX55-212ENST00000544738 KCNH6Q9H252 994 aa18.87■□□□□ 0.61
DDX55-212ENST00000544738 CPVLQ9H3G5 476 aa18.87■□□□□ 0.61
DDX55-212ENST00000544738 TRIOO75962 3097 aa18.87■□□□□ 0.61
DDX55-212ENST00000544738 RBM47A0AV96 593 aaKnown RBP18.86■□□□□ 0.61
DDX55-212ENST00000544738 ERICH2A1L162 156 aa18.86■□□□□ 0.61
DDX55-212ENST00000544738 SGSM2O43147 1006 aa18.86■□□□□ 0.61
DDX55-212ENST00000544738 CYP21A2P08686 494 aa18.86■□□□□ 0.61
DDX55-212ENST00000544738 ERVK-21P61565 698 aa18.86■□□□□ 0.61
DDX55-212ENST00000544738 DEFB103AP81534 67 aa18.86■□□□□ 0.61
DDX55-212ENST00000544738 PTH1RQ03431 593 aa18.86■□□□□ 0.61
DDX55-212ENST00000544738 SEC23AQ15436 765 aa18.86■□□□□ 0.61
DDX55-212ENST00000544738 FAM117BQ6P1L5 589 aa18.86■□□□□ 0.61
DDX55-212ENST00000544738 NFRKBQ6P4R8 1299 aa18.86■□□□□ 0.61
DDX55-212ENST00000544738 RAD9AQ99638 391 aa18.86■□□□□ 0.61
DDX55-212ENST00000544738 LCTP09848 1927 aa18.86■□□□□ 0.61
DDX55-212ENST00000544738 H3BQ06 376 aaPredicted RBP18.85■□□□□ 0.61
DDX55-212ENST00000544738 NKRFO15226 690 aaKnown RBP eCLIP18.85■□□□□ 0.61
DDX55-212ENST00000544738 EDNRBP24530 442 aa18.85■□□□□ 0.61
DDX55-212ENST00000544738 SART3Q15020 963 aaKnown RBP18.85■□□□□ 0.61
DDX55-212ENST00000544738 QRICH1Q2TAL8 776 aa18.85■□□□□ 0.61
DDX55-212ENST00000544738 EP400NLQ6ZTU2 488 aa18.85■□□□□ 0.61
DDX55-212ENST00000544738 CYB5R4Q7L1T6 521 aa18.85■□□□□ 0.61
DDX55-212ENST00000544738 RALYLQ86SE5 291 aaKnown RBP18.85■□□□□ 0.61
DDX55-212ENST00000544738 FBXO11Q86XK2 927 aa18.85■□□□□ 0.61
DDX55-212ENST00000544738 NCOA7Q8NI08 942 aa18.85■□□□□ 0.61
DDX55-212ENST00000544738 JMJD4Q9H9V9 463 aa18.85■□□□□ 0.61
DDX55-212ENST00000544738 MRPL11Q9Y3B7 192 aaKnown RBP18.85■□□□□ 0.61
DDX55-212ENST00000544738 POTEB3A0JP26 581 aa18.84■□□□□ 0.61
DDX55-212ENST00000544738 LINC01553A4QN01 128 aa18.84■□□□□ 0.61
DDX55-212ENST00000544738 KLRF2D3W0D1 207 aa18.84■□□□□ 0.61
DDX55-212ENST00000544738 PTGISQ16647 500 aa18.84■□□□□ 0.61
DDX55-212ENST00000544738 PUS10Q3MIT2 529 aaKnown RBP18.84■□□□□ 0.61
DDX55-212ENST00000544738 POTEBQ6S5H4 581 aa18.84■□□□□ 0.61
DDX55-212ENST00000544738 SCFD2Q8WU76 684 aa18.84■□□□□ 0.61
DDX55-212ENST00000544738 MAP4K1Q92918 833 aa18.84■□□□□ 0.61
DDX55-212ENST00000544738 VAT1LQ9HCJ6 419 aa18.84■□□□□ 0.61
DDX55-212ENST00000544738 IFIT3O14879 490 aaKnown RBP18.83■□□□□ 0.6
DDX55-212ENST00000544738 GJB5O95377 273 aa18.83■□□□□ 0.6
DDX55-212ENST00000544738 TRAF1Q13077 416 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms