RNA–Protein interactions for RNA: ENST00000544588.1

CIT-214, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-214ENST00000544588 DEFB123Q8N688 67 aa15.19■□□□□ 0.02
CIT-214ENST00000544588 SLC43A3Q8NBI5 491 aa15.19■□□□□ 0.02
CIT-214ENST00000544588 SEZ6LQ9BYH1 1024 aa15.19■□□□□ 0.02
CIT-214ENST00000544588 HIPK3Q9H422 1215 aa15.19■□□□□ 0.02
CIT-214ENST00000544588 DDX41Q9UJV9 622 aaKnown RBP15.19■□□□□ 0.02
CIT-214ENST00000544588 A6NJR5 290 aa15.18■□□□□ 0.02
CIT-214ENST00000544588 CD4P01730 458 aa15.18■□□□□ 0.02
CIT-214ENST00000544588 ACRP10323 421 aa15.18■□□□□ 0.02
CIT-214ENST00000544588 CSF2RAP15509 400 aa15.18■□□□□ 0.02
CIT-214ENST00000544588 CASTP20810 708 aaKnown RBP15.18■□□□□ 0.02
CIT-214ENST00000544588 CCL23P55773 120 aa15.18■□□□□ 0.02
CIT-214ENST00000544588 EXOSC10Q01780 885 aaKnown RBP15.18■□□□□ 0.02
CIT-214ENST00000544588 PPIGQ13427 754 aaKnown RBP eCLIP15.18■□□□□ 0.02
CIT-214ENST00000544588 USP17L6PQ6QN14 398 aa15.18■□□□□ 0.02
CIT-214ENST00000544588 VSIG10LQ86VR7 867 aa15.18■□□□□ 0.02
CIT-214ENST00000544588 SGMS1Q86VZ5 419 aa15.18■□□□□ 0.02
CIT-214ENST00000544588 IL31RAQ8NI17 732 aa15.18■□□□□ 0.02
CIT-214ENST00000544588 JAKMIP1Q96N16 626 aaKnown RBP15.18■□□□□ 0.02
CIT-214ENST00000544588 ALDH8A1Q9H2A2 487 aaPredicted RBP15.18■□□□□ 0.02
CIT-214ENST00000544588 TRMT13Q9NUP7 481 aaKnown RBP15.18■□□□□ 0.02
CIT-214ENST00000544588 RTEL1Q9NZ71 1219 aa15.18■□□□□ 0.02
CIT-214ENST00000544588 NOD1Q9Y239 953 aa15.18■□□□□ 0.02
CIT-214ENST00000544588 COL6A3P12111 3177 aa15.18■□□□□ 0.02
CIT-214ENST00000544588 ZBTB43O43298 467 aa15.17■□□□□ 0.02
CIT-214ENST00000544588 REC8O95072 547 aa15.17■□□□□ 0.02
CIT-214ENST00000544588 MMP3P08254 477 aa15.17■□□□□ 0.02
CIT-214ENST00000544588 HMGB1P09429 215 aaKnown RBP15.17■□□□□ 0.02
CIT-214ENST00000544588 SUPT20HL2P0C7V6 817 aa15.17■□□□□ 0.02
CIT-214ENST00000544588 CYP2C9P11712 490 aa15.17■□□□□ 0.02
CIT-214ENST00000544588 GHRHRQ02643 423 aa15.17■□□□□ 0.02
CIT-214ENST00000544588 ARHGAP1Q07960 439 aa15.17■□□□□ 0.02
CIT-214ENST00000544588 LAMC2Q13753 1193 aa15.17■□□□□ 0.02
CIT-214ENST00000544588 RTN1Q16799 776 aa15.17■□□□□ 0.02
CIT-214ENST00000544588 TSGA10IPQ3SY00 556 aa15.17■□□□□ 0.02
CIT-214ENST00000544588 TMTC3Q6ZXV5 915 aa15.17■□□□□ 0.02
CIT-214ENST00000544588 HEATR3Q7Z4Q2 680 aa15.17■□□□□ 0.02
CIT-214ENST00000544588 FAM161BQ96MY7 647 aa15.17■□□□□ 0.02
CIT-214ENST00000544588 PSTPIP2Q9H939 334 aa15.17■□□□□ 0.02
CIT-214ENST00000544588 MLXIPQ9HAP2 919 aa15.17■□□□□ 0.02
CIT-214ENST00000544588 KLF18A0A0U1RQI7 1052 aa15.16■□□□□ 0.02
CIT-214ENST00000544588 GOLGA8AA7E2F4 631 aa15.16■□□□□ 0.02
CIT-214ENST00000544588 GOLGA8BA8MQT2 603 aa15.16■□□□□ 0.02
CIT-214ENST00000544588 CPA1P15085 419 aa15.16■□□□□ 0.02
CIT-214ENST00000544588 DGKDQ16760 1214 aa15.16■□□□□ 0.02
CIT-214ENST00000544588 GNPTABQ3T906 1256 aa15.16■□□□□ 0.02
CIT-214ENST00000544588 GPR153Q6NV75 609 aa15.16■□□□□ 0.02
CIT-214ENST00000544588 KCNV1Q6PIU1 500 aa15.16■□□□□ 0.02
CIT-214ENST00000544588 APOA5Q6Q788 366 aa15.16■□□□□ 0.02
CIT-214ENST00000544588 BLOC1S2Q6QNY1 142 aa15.16■□□□□ 0.02
CIT-214ENST00000544588 SPATA33Q96N06 139 aa15.16■□□□□ 0.02
CIT-214ENST00000544588 ALG1Q9BT22 464 aa15.16■□□□□ 0.02
CIT-214ENST00000544588 RBM28Q9NW13 759 aaKnown RBP15.16■□□□□ 0.02
CIT-214ENST00000544588 PPP4R2Q9NY27 417 aa15.16■□□□□ 0.02
CIT-214ENST00000544588 BRPF3Q9ULD4 1205 aa15.16■□□□□ 0.02
CIT-214ENST00000544588 PLXNA1Q9UIW2 1896 aa15.16■□□□□ 0.02
CIT-214ENST00000544588 UMODL1Q5DID0 1318 aa15.16■□□□□ 0.02
CIT-214ENST00000544588 ALPK3Q96L96 1907 aa15.15■□□□□ 0.02
CIT-214ENST00000544588 GGPS1O95749 300 aa15.15■□□□□ 0.02
CIT-214ENST00000544588 CENPBP07199 599 aaPredicted RBP15.15■□□□□ 0.02
CIT-214ENST00000544588 HSPA4P34932 840 aa15.15■□□□□ 0.02
CIT-214ENST00000544588 Q6ZUG5 572 aa15.15■□□□□ 0.02
CIT-214ENST00000544588 GPKOWQ92917 476 aaPredicted RBP eCLIP15.15■□□□□ 0.02
CIT-214ENST00000544588 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.15■□□□□ 0.02
CIT-214ENST00000544588 SNX14Q9Y5W7 946 aa15.15■□□□□ 0.02
CIT-214ENST00000544588 V9GY48 417 aaPredicted RBP15.15■□□□□ 0.02
CIT-214ENST00000544588 LAMA4Q16363 1823 aa15.15■□□□□ 0.02
CIT-214ENST00000544588 RGS20O76081 388 aa15.14■□□□□ 0.01
CIT-214ENST00000544588 TGFB3P10600 412 aa15.14■□□□□ 0.01
CIT-214ENST00000544588 PSMA5P28066 241 aa15.14■□□□□ 0.01
CIT-214ENST00000544588 CELF3Q5SZQ8 465 aaKnown RBP15.14■□□□□ 0.01
CIT-214ENST00000544588 ZNF697Q5TEC3 545 aa15.14■□□□□ 0.01
CIT-214ENST00000544588 NFRKBQ6P4R8 1299 aa15.14■□□□□ 0.01
CIT-214ENST00000544588 ZNF365Q70YC5 407 aa15.14■□□□□ 0.01
CIT-214ENST00000544588 RETREG2Q8NC44 543 aa15.14■□□□□ 0.01
CIT-214ENST00000544588 SCLYQ96I15 445 aa15.14■□□□□ 0.01
CIT-214ENST00000544588 NOC4LQ9BVI4 516 aaKnown RBP15.14■□□□□ 0.01
CIT-214ENST00000544588 IL23AQ9NPF7 189 aa15.14■□□□□ 0.01
CIT-214ENST00000544588 SPDYE3A6NKU9 549 aa15.13■□□□□ 0.01
CIT-214ENST00000544588 NOP56O00567 594 aaKnown RBP15.13■□□□□ 0.01
CIT-214ENST00000544588 MEIS2O14770 477 aa15.13■□□□□ 0.01
CIT-214ENST00000544588 FGBP02675 491 aa15.13■□□□□ 0.01
CIT-214ENST00000544588 ZNF286BP0CG31 522 aa15.13■□□□□ 0.01
CIT-214ENST00000544588 UBA1P22314 1058 aaKnown RBP15.13■□□□□ 0.01
CIT-214ENST00000544588 METAP2P50579 478 aaKnown RBP eCLIP15.13■□□□□ 0.01
CIT-214ENST00000544588 NAPAP54920 295 aa15.13■□□□□ 0.01
CIT-214ENST00000544588 MRPS9P82933 396 aaKnown RBP15.13■□□□□ 0.01
CIT-214ENST00000544588 SP2Q02086 613 aa15.13■□□□□ 0.01
CIT-214ENST00000544588 APOBRQ0VD83 1088 aa15.13■□□□□ 0.01
CIT-214ENST00000544588 PTGISQ16647 500 aa15.13■□□□□ 0.01
CIT-214ENST00000544588 UBE2SQ16763 222 aa15.13■□□□□ 0.01
CIT-214ENST00000544588 TMEM240Q5SV17 173 aa15.13■□□□□ 0.01
CIT-214ENST00000544588 MYSM1Q5VVJ2 828 aa15.13■□□□□ 0.01
CIT-214ENST00000544588 PSRC1Q6PGN9 363 aaPredicted RBP15.13■□□□□ 0.01
CIT-214ENST00000544588 C16orf59Q7L2K0 433 aa15.13■□□□□ 0.01
CIT-214ENST00000544588 NLRX1Q86UT6 975 aa15.13■□□□□ 0.01
CIT-214ENST00000544588 RPUSD2Q8IZ73 545 aaKnown RBP15.13■□□□□ 0.01
CIT-214ENST00000544588 C7orf31Q8N865 590 aa15.13■□□□□ 0.01
CIT-214ENST00000544588 PPTC7Q8NI37 304 aa15.13■□□□□ 0.01
CIT-214ENST00000544588 BRF1Q92994 677 aa15.13■□□□□ 0.01
CIT-214ENST00000544588 EMID1Q96A84 441 aaPredicted RBP15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms