RNA–Protein interactions for RNA: ENST00000544432.5

VAMP1-208, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 3

Gene VAMP1, Length 759 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-208ENST00000544432 SOX1O00570 391 aaPredicted RBP16.06■□□□□ 0.16
VAMP1-208ENST00000544432 ZBTB43O43298 467 aa16.06■□□□□ 0.16
VAMP1-208ENST00000544432 STAM2O75886 525 aa16.06■□□□□ 0.16
VAMP1-208ENST00000544432 TGFB3P10600 412 aa16.06■□□□□ 0.16
VAMP1-208ENST00000544432 CCND2P30279 289 aa16.06■□□□□ 0.16
VAMP1-208ENST00000544432 ARHGAP1Q07960 439 aa16.06■□□□□ 0.16
VAMP1-208ENST00000544432 LY6KQ17RY6 165 aa16.06■□□□□ 0.16
VAMP1-208ENST00000544432 MICU3Q86XE3 530 aa16.06■□□□□ 0.16
VAMP1-208ENST00000544432 TEX2Q8IWB9 1127 aa16.06■□□□□ 0.16
VAMP1-208ENST00000544432 PIBF1Q8WXW3 757 aa16.06■□□□□ 0.16
VAMP1-208ENST00000544432 BRPF3Q9ULD4 1205 aa16.06■□□□□ 0.16
VAMP1-208ENST00000544432 RGS20O76081 388 aa16.05■□□□□ 0.16
VAMP1-208ENST00000544432 MYL3P08590 195 aa16.05■□□□□ 0.16
VAMP1-208ENST00000544432 MYCLP12524 364 aaPredicted RBP16.05■□□□□ 0.16
VAMP1-208ENST00000544432 LAMC2Q13753 1193 aa16.05■□□□□ 0.16
VAMP1-208ENST00000544432 MFSD5Q6N075 450 aa16.05■□□□□ 0.16
VAMP1-208ENST00000544432 XRRA1Q6P2D8 792 aa16.05■□□□□ 0.16
VAMP1-208ENST00000544432 FCHSD1Q86WN1 690 aa16.05■□□□□ 0.16
VAMP1-208ENST00000544432 CMTR1Q8N1G2 835 aaKnown RBP16.05■□□□□ 0.16
VAMP1-208ENST00000544432 CUL5Q93034 780 aa16.05■□□□□ 0.16
VAMP1-208ENST00000544432 TCEANC2Q96MN5 208 aa16.05■□□□□ 0.16
VAMP1-208ENST00000544432 LAMA2P24043 3122 aaKnown RBP16.04■□□□□ 0.16
VAMP1-208ENST00000544432 MEIS2O14770 477 aa16.04■□□□□ 0.16
VAMP1-208ENST00000544432 MMP3P08254 477 aa16.04■□□□□ 0.16
VAMP1-208ENST00000544432 SUPT20HL2P0C7V6 817 aa16.04■□□□□ 0.16
VAMP1-208ENST00000544432 PSMA5P28066 241 aa16.04■□□□□ 0.16
VAMP1-208ENST00000544432 PSMC6P62333 389 aa16.04■□□□□ 0.16
VAMP1-208ENST00000544432 FPGSQ05932 587 aa16.04■□□□□ 0.16
VAMP1-208ENST00000544432 PTPN11Q06124 597 aaPredicted RBP16.04■□□□□ 0.16
VAMP1-208ENST00000544432 FUT2Q10981 343 aa16.04■□□□□ 0.16
VAMP1-208ENST00000544432 RTN1Q16799 776 aa16.04■□□□□ 0.16
VAMP1-208ENST00000544432 NFRKBQ6P4R8 1299 aa16.04■□□□□ 0.16
VAMP1-208ENST00000544432 BLOC1S2Q6QNY1 142 aa16.04■□□□□ 0.16
VAMP1-208ENST00000544432 IL31RAQ8NI17 732 aa16.04■□□□□ 0.16
VAMP1-208ENST00000544432 AFG1LQ8WV93 481 aa16.04■□□□□ 0.16
VAMP1-208ENST00000544432 JAKMIP1Q96N16 626 aaKnown RBP16.04■□□□□ 0.16
VAMP1-208ENST00000544432 AGXT2Q9BYV1 514 aa16.04■□□□□ 0.16
VAMP1-208ENST00000544432 ALDH8A1Q9H2A2 487 aaPredicted RBP16.04■□□□□ 0.16
VAMP1-208ENST00000544432 PSTPIP2Q9H939 334 aa16.04■□□□□ 0.16
VAMP1-208ENST00000544432 MRVI1Q9Y6F6 885 aa16.04■□□□□ 0.16
VAMP1-208ENST00000544432 KLF18A0A0U1RQI7 1052 aa16.03■□□□□ 0.16
VAMP1-208ENST00000544432 HOXD8P13378 290 aaPredicted RBP16.03■□□□□ 0.16
VAMP1-208ENST00000544432 CASTP20810 708 aaKnown RBP16.03■□□□□ 0.16
VAMP1-208ENST00000544432 SHHQ15465 462 aa16.03■□□□□ 0.16
VAMP1-208ENST00000544432 RAB11FIP4Q86YS3 637 aa16.03■□□□□ 0.16
VAMP1-208ENST00000544432 PPTC7Q8NI37 304 aa16.03■□□□□ 0.16
VAMP1-208ENST00000544432 SMARCC2Q8TAQ2 1214 aa16.03■□□□□ 0.16
VAMP1-208ENST00000544432 LRCH3Q96II8 777 aa16.03■□□□□ 0.16
VAMP1-208ENST00000544432 FAM217BQ9NTX9 383 aaPredicted RBP16.03■□□□□ 0.16
VAMP1-208ENST00000544432 KIAA1217Q5T5P2 1943 aa16.03■□□□□ 0.16
VAMP1-208ENST00000544432 SCN10AQ9Y5Y9 1956 aa16.02■□□□□ 0.16
VAMP1-208ENST00000544432 CCDC196A0A1B0GTZ2 297 aa16.02■□□□□ 0.16
VAMP1-208ENST00000544432 GOLGA8AA7E2F4 631 aa16.02■□□□□ 0.16
VAMP1-208ENST00000544432 GOLGA8BA8MQT2 603 aa16.02■□□□□ 0.16
VAMP1-208ENST00000544432 B4GALT4O60513 344 aa16.02■□□□□ 0.16
VAMP1-208ENST00000544432 RPS6KB1P23443 525 aa16.02■□□□□ 0.16
VAMP1-208ENST00000544432 ICAM3P32942 547 aa16.02■□□□□ 0.16
VAMP1-208ENST00000544432 MRPS9P82933 396 aaKnown RBP16.02■□□□□ 0.16
VAMP1-208ENST00000544432 FGD1P98174 961 aa16.02■□□□□ 0.16
VAMP1-208ENST00000544432 PPIGQ13427 754 aaKnown RBP eCLIP16.02■□□□□ 0.168e-7■■■□□ 14.9
VAMP1-208ENST00000544432 DGKDQ16760 1214 aa16.02■□□□□ 0.16
VAMP1-208ENST00000544432 NBPF20Q3BBV1 942 aa16.02■□□□□ 0.16
VAMP1-208ENST00000544432 GNPTABQ3T906 1256 aa16.02■□□□□ 0.16
VAMP1-208ENST00000544432 C9orf50Q5SZB4 431 aa16.02■□□□□ 0.16
VAMP1-208ENST00000544432 CELF3Q5SZQ8 465 aaKnown RBP16.02■□□□□ 0.16
VAMP1-208ENST00000544432 MYSM1Q5VVJ2 828 aa16.02■□□□□ 0.16
VAMP1-208ENST00000544432 PCNX4Q63HM2 1172 aa16.02■□□□□ 0.16
VAMP1-208ENST00000544432 USP17L6PQ6QN14 398 aa16.02■□□□□ 0.16
VAMP1-208ENST00000544432 Q6ZUG5 572 aa16.02■□□□□ 0.16
VAMP1-208ENST00000544432 DHX37Q8IY37 1157 aaKnown RBP16.02■□□□□ 0.16
VAMP1-208ENST00000544432 CCDC82Q8N4S0 544 aa16.02■□□□□ 0.16
VAMP1-208ENST00000544432 TMEM199Q8N511 208 aa16.02■□□□□ 0.16
VAMP1-208ENST00000544432 INPP4AQ96PE3 977 aaPredicted RBP16.02■□□□□ 0.16
VAMP1-208ENST00000544432 USP26Q9BXU7 913 aa16.02■□□□□ 0.16
VAMP1-208ENST00000544432 TRPV6Q9H1D0 765 aa16.02■□□□□ 0.16
VAMP1-208ENST00000544432 CNTNAP5Q8WYK1 1306 aa16.01■□□□□ 0.15
VAMP1-208ENST00000544432 hCG_1984214I3L0E3 225 aa16.01■□□□□ 0.15
VAMP1-208ENST00000544432 PPFIA4O75335 1185 aa16.01■□□□□ 0.15
VAMP1-208ENST00000544432 EPHB4P54760 987 aa16.01■□□□□ 0.15
VAMP1-208ENST00000544432 EVCP57679 992 aa16.01■□□□□ 0.15
VAMP1-208ENST00000544432 PPP1R18Q6NYC8 613 aa16.01■□□□□ 0.15
VAMP1-208ENST00000544432 SESTD1Q86VW0 696 aa16.01■□□□□ 0.15
VAMP1-208ENST00000544432 ZNF713Q8N859 430 aaPredicted RBP16.01■□□□□ 0.15
VAMP1-208ENST00000544432 NOC4LQ9BVI4 516 aaKnown RBP16.01■□□□□ 0.15
VAMP1-208ENST00000544432 HIPK3Q9H422 1215 aa16.01■□□□□ 0.15
VAMP1-208ENST00000544432 V9GY48 417 aaPredicted RBP16.01■□□□□ 0.15
VAMP1-208ENST00000544432 NID2Q14112 1375 aa16■□□□□ 0.15
VAMP1-208ENST00000544432 hCG_1642624A0A1W2PR95 340 aa16■□□□□ 0.15
VAMP1-208ENST00000544432 SPATA31C2B4DYI2 1134 aa16■□□□□ 0.15
VAMP1-208ENST00000544432 CPA1P15085 419 aa16■□□□□ 0.15
VAMP1-208ENST00000544432 CDC27P30260 824 aa16■□□□□ 0.15
VAMP1-208ENST00000544432 METAP2P50579 478 aaKnown RBP eCLIP16■□□□□ 0.15
VAMP1-208ENST00000544432 SP2Q02086 613 aa16■□□□□ 0.15
VAMP1-208ENST00000544432 FAM109BQ6ICB4 259 aaPredicted RBP16■□□□□ 0.15
VAMP1-208ENST00000544432 HEATR3Q7Z4Q2 680 aa16■□□□□ 0.15
VAMP1-208ENST00000544432 KAT2BQ92831 832 aa16■□□□□ 0.15
VAMP1-208ENST00000544432 BRF1Q92994 677 aa16■□□□□ 0.15
VAMP1-208ENST00000544432 TM6SF1Q9BZW5 370 aa16■□□□□ 0.15
VAMP1-208ENST00000544432 GLT8D2Q9H1C3 349 aa16■□□□□ 0.15
VAMP1-208ENST00000544432 ZSWIM6Q9HCJ5 1215 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms