RNA–Protein interactions for RNA: ENST00000543818.5

LRTM2-208, Transcript of leucine rich repeats and transmembrane domains 2, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LRTM2, Length 3,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM2-208ENST00000543818 TBC1D7Q9P0N9 293 aa13.64□□□□□ -0.23
LRTM2-208ENST00000543818 HDAC9Q9UKV0 1011 aa13.64□□□□□ -0.23
LRTM2-208ENST00000543818 STK38LQ9Y2H1 464 aa13.64□□□□□ -0.23
LRTM2-208ENST00000543818 COG1Q8WTW3 980 aa13.63□□□□□ -0.23
LRTM2-208ENST00000543818 KIFC2Q96AC6 838 aa13.63□□□□□ -0.23
LRTM2-208ENST00000543818 THOC1Q96FV9 657 aaKnown RBP13.63□□□□□ -0.23
LRTM2-208ENST00000543818 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.63□□□□□ -0.23
LRTM2-208ENST00000543818 EPN1Q9Y6I3 576 aaPredicted RBP13.63□□□□□ -0.23
LRTM2-208ENST00000543818 LACTBP83111 547 aaPredicted RBP13.63□□□□□ -0.23
LRTM2-208ENST00000543818 TROAPQ12815 778 aa13.63□□□□□ -0.23
LRTM2-208ENST00000543818 NTRK3Q16288 839 aa13.63□□□□□ -0.23
LRTM2-208ENST00000543818 IFT20Q8IY31 132 aa13.63□□□□□ -0.23
LRTM2-208ENST00000543818 NIM1KQ8IY84 436 aa13.63□□□□□ -0.23
LRTM2-208ENST00000543818 RPUSD2Q8IZ73 545 aaKnown RBP13.63□□□□□ -0.23
LRTM2-208ENST00000543818 CCDC43Q96MW1 224 aaKnown RBP13.63□□□□□ -0.23
LRTM2-208ENST00000543818 SYNRGQ9UMZ2 1314 aa13.63□□□□□ -0.23
LRTM2-208ENST00000543818 CHMP2AO43633 222 aa13.63□□□□□ -0.23
LRTM2-208ENST00000543818 TAL1P17542 331 aaPredicted RBP13.63□□□□□ -0.23
LRTM2-208ENST00000543818 SP4Q02446 784 aa13.63□□□□□ -0.23
LRTM2-208ENST00000543818 MYO1EQ12965 1108 aa13.63□□□□□ -0.23
LRTM2-208ENST00000543818 SEPT2Q15019 361 aa13.63□□□□□ -0.23
LRTM2-208ENST00000543818 CCDC6Q16204 474 aa13.63□□□□□ -0.23
LRTM2-208ENST00000543818 SLC15A2Q16348 729 aa13.63□□□□□ -0.23
LRTM2-208ENST00000543818 PRAMEF18Q5VWM3 479 aa13.63□□□□□ -0.23
LRTM2-208ENST00000543818 IQUBQ8NA54 791 aa13.63□□□□□ -0.23
LRTM2-208ENST00000543818 NOA1Q8NC60 698 aaKnown RBP13.63□□□□□ -0.23
LRTM2-208ENST00000543818 GCOM1H8Y6P7 765 aaPredicted RBP13.62□□□□□ -0.23
LRTM2-208ENST00000543818 CFBP00751 764 aa13.62□□□□□ -0.23
LRTM2-208ENST00000543818 MYZAPP0CAP1 466 aa13.62□□□□□ -0.23
LRTM2-208ENST00000543818 GCFC2P16383 781 aaKnown RBP13.62□□□□□ -0.23
LRTM2-208ENST00000543818 SLC7A5Q01650 507 aa13.62□□□□□ -0.23
LRTM2-208ENST00000543818 ZFPM1Q8IX07 1006 aa13.62□□□□□ -0.23
LRTM2-208ENST00000543818 AGXT2Q9BYV1 514 aa13.62□□□□□ -0.23
LRTM2-208ENST00000543818 MRPL44Q9H9J2 332 aaKnown RBP13.62□□□□□ -0.23
LRTM2-208ENST00000543818 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.62□□□□□ -0.23
LRTM2-208ENST00000543818 ZBTB21Q9ULJ3 1066 aa13.62□□□□□ -0.23
LRTM2-208ENST00000543818 CTNND2Q9UQB3 1225 aa13.62□□□□□ -0.23
LRTM2-208ENST00000543818 SLIT2O94813 1529 aa13.62□□□□□ -0.23
LRTM2-208ENST00000543818 DDAH1O94760 285 aa13.62□□□□□ -0.23
LRTM2-208ENST00000543818 GNA11P29992 359 aa13.62□□□□□ -0.23
LRTM2-208ENST00000543818 ICA1Q05084 483 aa13.62□□□□□ -0.23
LRTM2-208ENST00000543818 GKAP1Q5VSY0 366 aaPredicted RBP13.62□□□□□ -0.23
LRTM2-208ENST00000543818 TRIM65Q6PJ69 517 aa13.62□□□□□ -0.23
LRTM2-208ENST00000543818 ADGRG1Q9Y653 693 aa13.62□□□□□ -0.23
LRTM2-208ENST00000543818 LRRIQ3A6PVS8 624 aaPredicted RBP13.62□□□□□ -0.23
LRTM2-208ENST00000543818 RASA1P20936 1047 aa13.62□□□□□ -0.23
LRTM2-208ENST00000543818 C2orf54Q08AI8 447 aa13.62□□□□□ -0.23
LRTM2-208ENST00000543818 EAPPQ56P03 285 aaPredicted RBP13.62□□□□□ -0.23
LRTM2-208ENST00000543818 SWT1Q5T5J6 900 aaKnown RBP13.62□□□□□ -0.23
LRTM2-208ENST00000543818 REXO1Q8N1G1 1221 aaKnown RBP13.62□□□□□ -0.23
LRTM2-208ENST00000543818 HNRNPLLQ8WVV9 542 aaKnown RBP13.62□□□□□ -0.23
LRTM2-208ENST00000543818 SH3GL3Q99963 347 aa13.62□□□□□ -0.23
LRTM2-208ENST00000543818 PRPF3O43395 683 aaKnown RBP13.61□□□□□ -0.23
LRTM2-208ENST00000543818 SHROOM1Q2M3G4 852 aaPredicted RBP13.61□□□□□ -0.23
LRTM2-208ENST00000543818 TTLL6Q8N841 843 aa13.61□□□□□ -0.23
LRTM2-208ENST00000543818 GH2P01242 217 aa13.61□□□□□ -0.23
LRTM2-208ENST00000543818 MXRA7P84157 204 aa13.61□□□□□ -0.23
LRTM2-208ENST00000543818 CDC42EP5Q6NZY7 148 aa13.61□□□□□ -0.23
LRTM2-208ENST00000543818 CCDC63Q8NA47 563 aa13.61□□□□□ -0.23
LRTM2-208ENST00000543818 FOXP1Q9H334 677 aaPredicted RBP13.61□□□□□ -0.23
LRTM2-208ENST00000543818 HAUS4Q9H6D7 363 aa13.61□□□□□ -0.23
LRTM2-208ENST00000543818 SORBS3O60504 671 aa13.61□□□□□ -0.23
LRTM2-208ENST00000543818 CHRM1P11229 460 aaPredicted RBP13.61□□□□□ -0.23
LRTM2-208ENST00000543818 NONOQ15233 471 aaKnown RBP eCLIP13.61□□□□□ -0.23
LRTM2-208ENST00000543818 SLFN13Q68D06 897 aa13.61□□□□□ -0.23
LRTM2-208ENST00000543818 LMNTD2Q8IXW0 634 aa13.61□□□□□ -0.23
LRTM2-208ENST00000543818 NUCKS1Q9H1E3 243 aaKnown RBP13.61□□□□□ -0.23
LRTM2-208ENST00000543818 BMP2KQ9NSY1 1161 aaPredicted RBP13.61□□□□□ -0.23
LRTM2-208ENST00000543818 HMGB2P26583 209 aaKnown RBP13.6□□□□□ -0.23
LRTM2-208ENST00000543818 PAK2Q13177 524 aa13.6□□□□□ -0.23
LRTM2-208ENST00000543818 PRPF4BQ13523 1007 aaKnown RBP13.6□□□□□ -0.23
LRTM2-208ENST00000543818 CALML4Q96GE6 196 aa13.6□□□□□ -0.23
LRTM2-208ENST00000543818 CRAMP1Q96RY5 1269 aa13.6□□□□□ -0.23
LRTM2-208ENST00000543818 HDAC6Q9UBN7 1215 aa13.6□□□□□ -0.23
LRTM2-208ENST00000543818 FAM184BQ9ULE4 1060 aa13.6□□□□□ -0.23
LRTM2-208ENST00000543818 TPX2Q9ULW0 747 aaKnown RBP13.6□□□□□ -0.23
LRTM2-208ENST00000543818 COL14A1Q05707 1796 aaKnown RBP13.6□□□□□ -0.23
LRTM2-208ENST00000543818 ARFGEF2Q9Y6D5 1785 aa13.6□□□□□ -0.23
LRTM2-208ENST00000543818 DDX39AO00148 427 aaKnown RBP13.6□□□□□ -0.23
LRTM2-208ENST00000543818 TMEM266Q2M3C6 531 aa13.6□□□□□ -0.23
LRTM2-208ENST00000543818 GNPTABQ3T906 1256 aa13.6□□□□□ -0.23
LRTM2-208ENST00000543818 RBM43Q6ZSC3 357 aaKnown RBP13.6□□□□□ -0.23
LRTM2-208ENST00000543818 RSRC2Q7L4I2 434 aaKnown RBP13.6□□□□□ -0.23
LRTM2-208ENST00000543818 PARP9Q8IXQ6 854 aa13.6□□□□□ -0.23
LRTM2-208ENST00000543818 TBCKQ8TEA7 893 aa13.6□□□□□ -0.23
LRTM2-208ENST00000543818 DDX4Q9NQI0 724 aaKnown RBP13.6□□□□□ -0.23
LRTM2-208ENST00000543818 IL17RBQ9NRM6 502 aa13.6□□□□□ -0.23
LRTM2-208ENST00000543818 USP17L15C9J2P7 530 aa13.6□□□□□ -0.23
LRTM2-208ENST00000543818 USP17L13C9JLJ4 530 aa13.6□□□□□ -0.23
LRTM2-208ENST00000543818 USP17L11C9JVI0 530 aa13.6□□□□□ -0.23
LRTM2-208ENST00000543818 USP17L18D6R9N7 530 aa13.6□□□□□ -0.23
LRTM2-208ENST00000543818 USP17L22D6RA61 530 aa13.6□□□□□ -0.23
LRTM2-208ENST00000543818 USP17L17D6RBQ6 530 aa13.6□□□□□ -0.23
LRTM2-208ENST00000543818 USP17L19D6RCP7 530 aa13.6□□□□□ -0.23
LRTM2-208ENST00000543818 USP17L20D6RJB6 530 aa13.6□□□□□ -0.23
LRTM2-208ENST00000543818 EIF3HO15372 352 aaKnown RBP eCLIP13.6□□□□□ -0.23
LRTM2-208ENST00000543818 ATP11AP98196 1134 aa13.6□□□□□ -0.23
LRTM2-208ENST00000543818 CACNB1Q02641 598 aaPredicted RBP13.6□□□□□ -0.23
LRTM2-208ENST00000543818 USP17L24Q0WX57 530 aa13.6□□□□□ -0.23
LRTM2-208ENST00000543818 SEC23AQ15436 765 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms