RNA–Protein interactions for RNA: ENST00000543789.6

CDKN3-207, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-207ENST00000543789 VAT1LQ9HCJ6 419 aa26.41■■□□□ 1.82
CDKN3-207ENST00000543789 ZSWIM5Q9P217 1185 aa26.41■■□□□ 1.82
CDKN3-207ENST00000543789 SCN10AQ9Y5Y9 1956 aa26.4■■□□□ 1.82
CDKN3-207ENST00000543789 EPOPA6NHQ4 379 aa26.4■■□□□ 1.82
CDKN3-207ENST00000543789 DHX16O60231 1041 aaKnown RBP26.4■■□□□ 1.82
CDKN3-207ENST00000543789 AAMPQ13685 434 aa26.4■■□□□ 1.82
CDKN3-207ENST00000543789 DGKDQ16760 1214 aa26.4■■□□□ 1.82
CDKN3-207ENST00000543789 PLEKHM2Q8IWE5 1019 aa26.4■■□□□ 1.82
CDKN3-207ENST00000543789 ENAHQ8N8S7 591 aaPredicted RBP26.4■■□□□ 1.82
CDKN3-207ENST00000543789 CTAGE1Q96RT6 745 aa26.4■■□□□ 1.82
CDKN3-207ENST00000543789 OSBPL3Q9H4L5 887 aa26.4■■□□□ 1.82
CDKN3-207ENST00000543789 DIAPH3Q9NSV4 1193 aa26.4■■□□□ 1.82
CDKN3-207ENST00000543789 DDX41Q9UJV9 622 aaKnown RBP26.4■■□□□ 1.82
CDKN3-207ENST00000543789 EIF3JO75822 258 aaKnown RBP26.39■■□□□ 1.82
CDKN3-207ENST00000543789 SELPP16109 830 aa26.39■■□□□ 1.82
CDKN3-207ENST00000543789 KCNJ6P48051 423 aa26.39■■□□□ 1.82
CDKN3-207ENST00000543789 CHD1LQ86WJ1 897 aa26.39■■□□□ 1.82
CDKN3-207ENST00000543789 JMJD4Q9H9V9 463 aa26.39■■□□□ 1.82
CDKN3-207ENST00000543789 TLL1O43897 1013 aa26.38■■□□□ 1.81
CDKN3-207ENST00000543789 ARHGEF15O94989 841 aa26.38■■□□□ 1.81
CDKN3-207ENST00000543789 PARNO95453 639 aaKnown RBP26.38■■□□□ 1.81
CDKN3-207ENST00000543789 GPNMBQ14956 572 aa26.38■■□□□ 1.81
CDKN3-207ENST00000543789 IMMTQ16891 758 aaKnown RBP26.38■■□□□ 1.81
CDKN3-207ENST00000543789 C7orf31Q8N865 590 aa26.38■■□□□ 1.81
CDKN3-207ENST00000543789 EMID1Q96A84 441 aaPredicted RBP26.38■■□□□ 1.81
CDKN3-207ENST00000543789 HIP1O00291 1037 aa26.37■■□□□ 1.81
CDKN3-207ENST00000543789 NR3C2P08235 984 aa26.37■■□□□ 1.81
CDKN3-207ENST00000543789 EIF2AK2P19525 551 aaKnown RBP26.37■■□□□ 1.81
CDKN3-207ENST00000543789 LAMC2Q13753 1193 aa26.37■■□□□ 1.81
CDKN3-207ENST00000543789 KRT40Q6A162 431 aa26.37■■□□□ 1.81
CDKN3-207ENST00000543789 LRRC8DQ7L1W4 858 aa26.37■■□□□ 1.81
CDKN3-207ENST00000543789 NECAB3Q96P71 396 aaPredicted RBP26.37■■□□□ 1.81
CDKN3-207ENST00000543789 DSCC1Q9BVC3 393 aa26.37■■□□□ 1.81
CDKN3-207ENST00000543789 KRT23Q9C075 422 aa26.37■■□□□ 1.81
CDKN3-207ENST00000543789 PXMP2Q9NR77 195 aa26.37■■□□□ 1.81
CDKN3-207ENST00000543789 GTF2IRD1Q9UHL9 959 aa26.37■■□□□ 1.81
CDKN3-207ENST00000543789 CTNNA3Q9UI47 895 aa26.37■■□□□ 1.81
CDKN3-207ENST00000543789 MRVI1Q9Y6F6 885 aa26.37■■□□□ 1.81
CDKN3-207ENST00000543789 CFBP00751 764 aa26.36■■□□□ 1.81
CDKN3-207ENST00000543789 WDR5P61964 334 aaKnown RBP26.36■■□□□ 1.81
CDKN3-207ENST00000543789 DHX38Q92620 1227 aaKnown RBP26.36■■□□□ 1.81
CDKN3-207ENST00000543789 UBAC1Q9BSL1 405 aa26.36■■□□□ 1.81
CDKN3-207ENST00000543789 KATNAL1Q9BW62 490 aa26.36■■□□□ 1.81
CDKN3-207ENST00000543789 HDAC6Q9UBN7 1215 aa26.36■■□□□ 1.81
CDKN3-207ENST00000543789 COG5Q9UP83 839 aa26.36■■□□□ 1.81
CDKN3-207ENST00000543789 CKBP12277 381 aa26.35■■□□□ 1.81
CDKN3-207ENST00000543789 PSEN2P49810 448 aa26.35■■□□□ 1.81
CDKN3-207ENST00000543789 KCNQ1P51787 676 aa26.35■■□□□ 1.81
CDKN3-207ENST00000543789 NUCB1Q02818 461 aa26.35■■□□□ 1.81
CDKN3-207ENST00000543789 RBL2Q08999 1139 aa26.35■■□□□ 1.81
CDKN3-207ENST00000543789 CNKSR3Q6P9H4 555 aa26.35■■□□□ 1.81
CDKN3-207ENST00000543789 DHX37Q8IY37 1157 aaKnown RBP26.35■■□□□ 1.81
CDKN3-207ENST00000543789 PPTC7Q8NI37 304 aa26.35■■□□□ 1.81
CDKN3-207ENST00000543789 ALG1Q9BT22 464 aa26.35■■□□□ 1.81
CDKN3-207ENST00000543789 ZBED2Q9BTP6 218 aa26.35■■□□□ 1.81
CDKN3-207ENST00000543789 AMNQ9BXJ7 453 aa26.35■■□□□ 1.81
CDKN3-207ENST00000543789 CNNM2Q9H8M5 875 aa26.35■■□□□ 1.81
CDKN3-207ENST00000543789 GBF1Q92538 1859 aa26.34■■□□□ 1.81
CDKN3-207ENST00000543789 CXCL10P02778 98 aa26.34■■□□□ 1.81
CDKN3-207ENST00000543789 GRB10Q13322 594 aa26.34■■□□□ 1.81
CDKN3-207ENST00000543789 MFSD10Q14728 455 aa26.34■■□□□ 1.81
CDKN3-207ENST00000543789 XIRP2A4UGR9 3374 aa26.33■■□□□ 1.81
CDKN3-207ENST00000543789 NBNO60934 754 aa26.33■■□□□ 1.81
CDKN3-207ENST00000543789 IGHDP01880 384 aa26.33■■□□□ 1.81
CDKN3-207ENST00000543789 HSD17B4P51659 736 aa26.33■■□□□ 1.81
CDKN3-207ENST00000543789 KIAA0753Q2KHM9 967 aa26.33■■□□□ 1.81
CDKN3-207ENST00000543789 IFIT1BQ5T764 474 aaKnown RBP26.33■■□□□ 1.81
CDKN3-207ENST00000543789 STAG2Q8N3U4 1231 aa26.33■■□□□ 1.81
CDKN3-207ENST00000543789 ABHD14A-ACY1A0A1B0GW23 586 aa26.32■■□□□ 1.8
CDKN3-207ENST00000543789 HAS3O00219 553 aa26.32■■□□□ 1.8
CDKN3-207ENST00000543789 F2P00734 622 aa26.32■■□□□ 1.8
CDKN3-207ENST00000543789 PTK7Q13308 1070 aa26.32■■□□□ 1.8
CDKN3-207ENST00000543789 TMCO2Q7Z6W1 182 aaPredicted RBP26.32■■□□□ 1.8
CDKN3-207ENST00000543789 MAP3K20Q9NYL2 800 aaKnown RBP26.32■■□□□ 1.8
CDKN3-207ENST00000543789 SCN5AQ14524 2016 aa26.32■■□□□ 1.8
CDKN3-207ENST00000543789 LCHNA4D1U4 455 aa26.31■■□□□ 1.8
CDKN3-207ENST00000543789 OPLAHO14841 1288 aa26.31■■□□□ 1.8
CDKN3-207ENST00000543789 LPXNO60711 386 aa26.31■■□□□ 1.8
CDKN3-207ENST00000543789 PPFIA4O75335 1185 aa26.31■■□□□ 1.8
CDKN3-207ENST00000543789 ZNF286BP0CG31 522 aa26.31■■□□□ 1.8
CDKN3-207ENST00000543789 MYCLP12524 364 aaPredicted RBP26.31■■□□□ 1.8
CDKN3-207ENST00000543789 DEFB103AP81534 67 aa26.31■■□□□ 1.8
CDKN3-207ENST00000543789 GHRHRQ02643 423 aa26.31■■□□□ 1.8
CDKN3-207ENST00000543789 KCNV1Q6PIU1 500 aa26.31■■□□□ 1.8
CDKN3-207ENST00000543789 STOX1Q6ZVD7 989 aa26.31■■□□□ 1.8
CDKN3-207ENST00000543789 SPRED2Q7Z698 418 aa26.31■■□□□ 1.8
CDKN3-207ENST00000543789 HLA-CQ95604 372 aa26.31■■□□□ 1.8
CDKN3-207ENST00000543789 PDCD2LQ9BRP1 358 aa26.31■■□□□ 1.8
CDKN3-207ENST00000543789 KLRF2D3W0D1 207 aa26.3■■□□□ 1.8
CDKN3-207ENST00000543789 EFCAB14O75071 495 aa26.3■■□□□ 1.8
CDKN3-207ENST00000543789 MYSM1Q5VVJ2 828 aa26.3■■□□□ 1.8
CDKN3-207ENST00000543789 SAMD3Q8N6K7 520 aa26.3■■□□□ 1.8
CDKN3-207ENST00000543789 MTMR8Q96EF0 704 aa26.3■■□□□ 1.8
CDKN3-207ENST00000543789 RAD9AQ99638 391 aa26.3■■□□□ 1.8
CDKN3-207ENST00000543789 RAPGEFL1Q9UHV5 662 aa26.3■■□□□ 1.8
CDKN3-207ENST00000543789 PCDHA1Q9Y5I3 950 aa26.3■■□□□ 1.8
CDKN3-207ENST00000543789 PRRC2BQ5JSZ5 2229 aaKnown RBP26.29■■□□□ 1.8
CDKN3-207ENST00000543789 ZBTB5O15062 677 aa26.29■■□□□ 1.8
CDKN3-207ENST00000543789 GJB5O95377 273 aa26.29■■□□□ 1.8
CDKN3-207ENST00000543789 HOXD8P13378 290 aaPredicted RBP26.29■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms