RNA–Protein interactions for RNA: ENST00000543187.5

C1S-220, Transcript of complement C1s, humanhuman

TSL 2

Gene C1S, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1S-220ENST00000543187 CYB5R4Q7L1T6 521 aa18.35■□□□□ 0.53
C1S-220ENST00000543187 DDX41Q9UJV9 622 aaKnown RBP18.35■□□□□ 0.53
C1S-220ENST00000543187 BAZ2BQ9UIF8 2168 aaKnown RBP18.34■□□□□ 0.53
C1S-220ENST00000543187 NR3C2P08235 984 aa18.34■□□□□ 0.53
C1S-220ENST00000543187 GSPT1P15170 499 aaKnown RBP18.34■□□□□ 0.53
C1S-220ENST00000543187 PDE4AP27815 886 aa18.34■□□□□ 0.53
C1S-220ENST00000543187 TRDNQ13061 729 aa18.34■□□□□ 0.53
C1S-220ENST00000543187 TMEM67Q5HYA8 995 aa18.34■□□□□ 0.53
C1S-220ENST00000543187 TTC22Q5TAA0 569 aa18.34■□□□□ 0.53
C1S-220ENST00000543187 FTOQ9C0B1 505 aaKnown RBP eCLIP18.34■□□□□ 0.53
C1S-220ENST00000543187 PXMP2Q9NR77 195 aa18.34■□□□□ 0.53
C1S-220ENST00000543187 MAD2L2Q9UI95 211 aa18.34■□□□□ 0.53
C1S-220ENST00000543187 MRVI1Q9Y6F6 885 aa18.34■□□□□ 0.53
C1S-220ENST00000543187 SPTBN5Q9NRC6 3674 aaKnown RBP18.34■□□□□ 0.53
C1S-220ENST00000543187 CHD7Q9P2D1 2997 aa18.33■□□□□ 0.53
C1S-220ENST00000543187 OPLAHO14841 1288 aa18.33■□□□□ 0.52
C1S-220ENST00000543187 ZBTB5O15062 677 aa18.33■□□□□ 0.52
C1S-220ENST00000543187 HSD17B4P51659 736 aa18.33■□□□□ 0.52
C1S-220ENST00000543187 DGKDQ16760 1214 aa18.33■□□□□ 0.52
C1S-220ENST00000543187 GDF6Q6KF10 455 aaPredicted RBP18.33■□□□□ 0.52
C1S-220ENST00000543187 SESTD1Q86VW0 696 aa18.33■□□□□ 0.52
C1S-220ENST00000543187 CCDC155Q8N6L0 562 aa18.33■□□□□ 0.52
C1S-220ENST00000543187 CAGE1Q8TC20 777 aa18.33■□□□□ 0.52
C1S-220ENST00000543187 KAT2BQ92831 832 aa18.33■□□□□ 0.52
C1S-220ENST00000543187 MTMR8Q96EF0 704 aa18.33■□□□□ 0.52
C1S-220ENST00000543187 SLC9A7Q96T83 725 aa18.33■□□□□ 0.52
C1S-220ENST00000543187 MAP3K20Q9NYL2 800 aaKnown RBP18.33■□□□□ 0.52
C1S-220ENST00000543187 PCDHA1Q9Y5I3 950 aa18.33■□□□□ 0.52
C1S-220ENST00000543187 PALM3A6NDB9 673 aaPredicted RBP18.32■□□□□ 0.52
C1S-220ENST00000543187 PPP1R11O60927 126 aaPredicted RBP18.32■□□□□ 0.52
C1S-220ENST00000543187 GHRHRQ02643 423 aa18.32■□□□□ 0.52
C1S-220ENST00000543187 PHOSPHO2Q8TCD6 241 aa18.32■□□□□ 0.52
C1S-220ENST00000543187 ATXN2LQ8WWM7 1075 aaKnown RBP18.32■□□□□ 0.52
C1S-220ENST00000543187 RUFY2Q8WXA3 655 aa18.32■□□□□ 0.52
C1S-220ENST00000543187 THEGQ9P2T0 379 aa18.32■□□□□ 0.52
C1S-220ENST00000543187 U3KPZ7 1027 aaPredicted RBP18.32■□□□□ 0.52
C1S-220ENST00000543187 CA3P07451 260 aa18.31■□□□□ 0.52
C1S-220ENST00000543187 CYP21A2P08686 494 aa18.31■□□□□ 0.52
C1S-220ENST00000543187 MYCLP12524 364 aaPredicted RBP18.31■□□□□ 0.52
C1S-220ENST00000543187 LAMC2Q13753 1193 aa18.31■□□□□ 0.52
C1S-220ENST00000543187 HOMER1Q86YM7 354 aa18.31■□□□□ 0.52
C1S-220ENST00000543187 DHX37Q8IY37 1157 aaKnown RBP18.31■□□□□ 0.52
C1S-220ENST00000543187 AFAP1L1Q8TED9 768 aa18.31■□□□□ 0.52
C1S-220ENST00000543187 EMID1Q96A84 441 aaPredicted RBP18.31■□□□□ 0.52
C1S-220ENST00000543187 PDCD2LQ9BRP1 358 aa18.31■□□□□ 0.52
C1S-220ENST00000543187 ALG1Q9BT22 464 aa18.31■□□□□ 0.52
C1S-220ENST00000543187 KATNAL1Q9BW62 490 aa18.31■□□□□ 0.52
C1S-220ENST00000543187 GTF2IRD1Q9UHL9 959 aa18.31■□□□□ 0.52
C1S-220ENST00000543187 TTC28Q96AY4 2481 aa18.31■□□□□ 0.52
C1S-220ENST00000543187 ERICH2A1L162 156 aa18.3■□□□□ 0.52
C1S-220ENST00000543187 KIF28PB7ZC32 967 aa18.3■□□□□ 0.52
C1S-220ENST00000543187 IFIT3O14879 490 aaKnown RBP18.3■□□□□ 0.52
C1S-220ENST00000543187 HOXA13P31271 388 aaPredicted RBP18.3■□□□□ 0.52
C1S-220ENST00000543187 PSEN2P49810 448 aa18.3■□□□□ 0.52
C1S-220ENST00000543187 PTH1RQ03431 593 aa18.3■□□□□ 0.52
C1S-220ENST00000543187 GRM4Q14833 912 aa18.3■□□□□ 0.52
C1S-220ENST00000543187 STOX1Q6ZVD7 989 aa18.3■□□□□ 0.52
C1S-220ENST00000543187 SAMD3Q8N6K7 520 aa18.3■□□□□ 0.52
C1S-220ENST00000543187 C7orf31Q8N865 590 aa18.3■□□□□ 0.52
C1S-220ENST00000543187 CTAGE1Q96RT6 745 aa18.3■□□□□ 0.52
C1S-220ENST00000543187 PIGSQ96S52 555 aa18.3■□□□□ 0.52
C1S-220ENST00000543187 HDAC6Q9UBN7 1215 aa18.3■□□□□ 0.52
C1S-220ENST00000543187 SUPT16HQ9Y5B9 1047 aaKnown RBP18.3■□□□□ 0.52
C1S-220ENST00000543187 PTPRSQ13332 1948 aa18.29■□□□□ 0.52
C1S-220ENST00000543187 RGS20O76081 388 aa18.29■□□□□ 0.52
C1S-220ENST00000543187 BAIAP3O94812 1187 aa18.29■□□□□ 0.52
C1S-220ENST00000543187 SELPP16109 830 aa18.29■□□□□ 0.52
C1S-220ENST00000543187 CHMLP26374 656 aa18.29■□□□□ 0.52
C1S-220ENST00000543187 TRAF1Q13077 416 aa18.29■□□□□ 0.52
C1S-220ENST00000543187 MFSD10Q14728 455 aa18.29■□□□□ 0.52
C1S-220ENST00000543187 PGM5Q15124 567 aa18.29■□□□□ 0.52
C1S-220ENST00000543187 KCNV1Q6PIU1 500 aa18.29■□□□□ 0.52
C1S-220ENST00000543187 RALYLQ86SE5 291 aaKnown RBP18.29■□□□□ 0.52
C1S-220ENST00000543187 VSIG10LQ86VR7 867 aa18.29■□□□□ 0.52
C1S-220ENST00000543187 HERC6Q8IVU3 1022 aa18.29■□□□□ 0.52
C1S-220ENST00000543187 MICALL1Q8N3F8 863 aa18.29■□□□□ 0.52
C1S-220ENST00000543187 PPTC7Q8NI37 304 aa18.29■□□□□ 0.52
C1S-220ENST00000543187 DHX38Q92620 1227 aaKnown RBP18.29■□□□□ 0.52
C1S-220ENST00000543187 RIOX1Q9H6W3 641 aa18.29■□□□□ 0.52
C1S-220ENST00000543187 CERS4Q9HA82 394 aa18.29■□□□□ 0.52
C1S-220ENST00000543187 GCOM1H8Y6P7 765 aaPredicted RBP18.28■□□□□ 0.52
C1S-220ENST00000543187 F2P00734 622 aa18.28■□□□□ 0.52
C1S-220ENST00000543187 POLR2MP0CAP2 368 aa18.28■□□□□ 0.52
C1S-220ENST00000543187 ZNF286BP0CG31 522 aa18.28■□□□□ 0.52
C1S-220ENST00000543187 KCNJ6P48051 423 aa18.28■□□□□ 0.52
C1S-220ENST00000543187 WTAPQ15007 396 aa18.28■□□□□ 0.52
C1S-220ENST00000543187 KIAA0753Q2KHM9 967 aa18.28■□□□□ 0.52
C1S-220ENST00000543187 SLC35G1Q2M3R5 365 aa18.28■□□□□ 0.52
C1S-220ENST00000543187 MYSM1Q5VVJ2 828 aa18.28■□□□□ 0.52
C1S-220ENST00000543187 LRRC8DQ7L1W4 858 aa18.28■□□□□ 0.52
C1S-220ENST00000543187 NCOA7Q8NI08 942 aa18.28■□□□□ 0.52
C1S-220ENST00000543187 ASB2Q96Q27 587 aa18.28■□□□□ 0.52
C1S-220ENST00000543187 TSPYL2Q9H2G4 693 aaPredicted RBP18.28■□□□□ 0.52
C1S-220ENST00000543187 SENP2Q9HC62 589 aa18.28■□□□□ 0.52
C1S-220ENST00000543187 PRRC2BQ5JSZ5 2229 aaKnown RBP18.27■□□□□ 0.52
C1S-220ENST00000543187 E7EWF7 191 aa18.27■□□□□ 0.52
C1S-220ENST00000543187 HAS3O00219 553 aa18.27■□□□□ 0.52
C1S-220ENST00000543187 RFXAPO00287 272 aa18.27■□□□□ 0.52
C1S-220ENST00000543187 CYTH3O43739 400 aa18.27■□□□□ 0.52
C1S-220ENST00000543187 SORBS3O60504 671 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms