RNA–Protein interactions for RNA: ENST00000542714.5

CHFR-221, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 542 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-221ENST00000542714 PANK2Q9BZ23 570 aa15□□□□□ -0.01
CHFR-221ENST00000542714 CCSER1Q9C0I3 900 aa15□□□□□ -0.01
CHFR-221ENST00000542714 MAF1Q9H063 256 aa15□□□□□ -0.01
CHFR-221ENST00000542714 PXMP2Q9NR77 195 aa15□□□□□ -0.01
CHFR-221ENST00000542714 CYP39A1Q9NYL5 469 aa15□□□□□ -0.01
CHFR-221ENST00000542714 SERTAD1Q9UHV2 236 aa15□□□□□ -0.01
CHFR-221ENST00000542714 RABGAP1Q9Y3P9 1069 aa15□□□□□ -0.01
CHFR-221ENST00000542714 TLL2Q9Y6L7 1015 aa15□□□□□ -0.01
CHFR-221ENST00000542714 FSD2A1L4K1 749 aa14.99□□□□□ -0.01
CHFR-221ENST00000542714 MSH4O15457 936 aa14.99□□□□□ -0.01
CHFR-221ENST00000542714 Q3C1V9 767 aa14.99□□□□□ -0.01
CHFR-221ENST00000542714 PCNX4Q63HM2 1172 aa14.99□□□□□ -0.01
CHFR-221ENST00000542714 PDILTQ8N807 584 aa14.99□□□□□ -0.01
CHFR-221ENST00000542714 SMC1BQ8NDV3 1235 aa14.99□□□□□ -0.01
CHFR-221ENST00000542714 LRRC15Q8TF66 581 aa14.99□□□□□ -0.01
CHFR-221ENST00000542714 AK8Q96MA6 479 aa14.99□□□□□ -0.01
CHFR-221ENST00000542714 PNMA3Q9UL41 463 aa14.99□□□□□ -0.01
CHFR-221ENST00000542714 PLXNA1Q9UIW2 1896 aa14.99□□□□□ -0.01
CHFR-221ENST00000542714 POTEMA6NI47 508 aa14.98□□□□□ -0.01
CHFR-221ENST00000542714 MEIS1O00470 390 aa14.98□□□□□ -0.01
CHFR-221ENST00000542714 TBX3O15119 743 aa14.98□□□□□ -0.01
CHFR-221ENST00000542714 FOXN1O15353 648 aa14.98□□□□□ -0.01
CHFR-221ENST00000542714 SLC10A3P09131 477 aa14.98□□□□□ -0.01
CHFR-221ENST00000542714 EIF2AK2P19525 551 aaKnown RBP14.98□□□□□ -0.01
CHFR-221ENST00000542714 ZNF76P36508 570 aa14.98□□□□□ -0.01
CHFR-221ENST00000542714 ZNF157P51786 506 aaPredicted RBP14.98□□□□□ -0.01
CHFR-221ENST00000542714 MRPS9P82933 396 aaKnown RBP14.98□□□□□ -0.01
CHFR-221ENST00000542714 MDM2Q00987 491 aaPredicted RBP14.98□□□□□ -0.01
CHFR-221ENST00000542714 SPIRE1Q08AE8 756 aa14.98□□□□□ -0.01
CHFR-221ENST00000542714 KARSQ15046 597 aaKnown RBP14.98□□□□□ -0.01
CHFR-221ENST00000542714 PGM5Q15124 567 aa14.98□□□□□ -0.01
CHFR-221ENST00000542714 CEP55Q53EZ4 464 aa14.98□□□□□ -0.01
CHFR-221ENST00000542714 RGMBQ6NW40 437 aa14.98□□□□□ -0.01
CHFR-221ENST00000542714 PLA2G4DQ86XP0 818 aa14.98□□□□□ -0.01
CHFR-221ENST00000542714 ERCC4Q92889 916 aaPredicted RBP14.98□□□□□ -0.01
CHFR-221ENST00000542714 DHX58Q96C10 678 aa14.98□□□□□ -0.01
CHFR-221ENST00000542714 RMDN3Q96TC7 470 aa14.98□□□□□ -0.01
CHFR-221ENST00000542714 MXRA8Q9BRK3 442 aa14.98□□□□□ -0.01
CHFR-221ENST00000542714 PDCD2LQ9BRP1 358 aa14.98□□□□□ -0.01
CHFR-221ENST00000542714 TTC12Q9H892 705 aaPredicted RBP14.98□□□□□ -0.01
CHFR-221ENST00000542714 UBIAD1Q9Y5Z9 338 aa14.98□□□□□ -0.01
CHFR-221ENST00000542714 DOCK5Q9H7D0 1870 aa14.97□□□□□ -0.01
CHFR-221ENST00000542714 ASTN1O14525 1302 aa14.97□□□□□ -0.01
CHFR-221ENST00000542714 SLC25A27O95847 323 aa14.97□□□□□ -0.01
CHFR-221ENST00000542714 PRR29P0C7W0 189 aa14.97□□□□□ -0.01
CHFR-221ENST00000542714 ARP10275 920 aa14.97□□□□□ -0.01
CHFR-221ENST00000542714 ITGB5P18084 799 aa14.97□□□□□ -0.01
CHFR-221ENST00000542714 ERCC3P19447 782 aa14.97□□□□□ -0.01
CHFR-221ENST00000542714 ERVK-9P63128 1117 aa14.97□□□□□ -0.01
CHFR-221ENST00000542714 ERVK-24P63145 666 aa14.97□□□□□ -0.01
CHFR-221ENST00000542714 PDIA5Q14554 519 aa14.97□□□□□ -0.01
CHFR-221ENST00000542714 TMEM266Q2M3C6 531 aa14.97□□□□□ -0.01
CHFR-221ENST00000542714 PDXDC2PQ6P474 469 aa14.97□□□□□ -0.01
CHFR-221ENST00000542714 SH3RF1Q7Z6J0 888 aa14.97□□□□□ -0.01
CHFR-221ENST00000542714 CABP7Q86V35 215 aa14.97□□□□□ -0.01
CHFR-221ENST00000542714 NCAPG2Q86XI2 1143 aa14.97□□□□□ -0.01
CHFR-221ENST00000542714 ELOA2Q8IYF1 753 aaPredicted RBP14.97□□□□□ -0.01
CHFR-221ENST00000542714 SLFN12Q8IYM2 578 aa14.97□□□□□ -0.01
CHFR-221ENST00000542714 CNNM3Q8NE01 707 aa14.97□□□□□ -0.01
CHFR-221ENST00000542714 GTF3C2Q8WUA4 911 aaPredicted RBP14.97□□□□□ -0.01
CHFR-221ENST00000542714 SLC5A5Q92911 643 aa14.97□□□□□ -0.01
CHFR-221ENST00000542714 SDF4Q9BRK5 362 aa14.97□□□□□ -0.01
CHFR-221ENST00000542714 FBXO40Q9UH90 709 aa14.97□□□□□ -0.01
CHFR-221ENST00000542714 VAV3Q9UKW4 847 aa14.97□□□□□ -0.01
CHFR-221ENST00000542714 PFASO15067 1338 aa14.96□□□□□ -0.01
CHFR-221ENST00000542714 ADGRA2Q96PE1 1338 aa14.96□□□□□ -0.01
CHFR-221ENST00000542714 WDR81Q562E7 1941 aa14.96□□□□□ -0.01
CHFR-221ENST00000542714 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.96□□□□□ -0.01
CHFR-221ENST00000542714 FAM155AB1AL88 458 aaPredicted RBP14.96□□□□□ -0.01
CHFR-221ENST00000542714 COPB2P35606 906 aa14.96□□□□□ -0.01
CHFR-221ENST00000542714 UBA7P41226 1012 aa14.96□□□□□ -0.01
CHFR-221ENST00000542714 GRB10Q13322 594 aa14.96□□□□□ -0.01
CHFR-221ENST00000542714 PNOCQ13519 176 aa14.96□□□□□ -0.01
CHFR-221ENST00000542714 NAALADL2Q58DX5 795 aa14.96□□□□□ -0.01
CHFR-221ENST00000542714 ARHGEF16Q5VV41 709 aa14.96□□□□□ -0.01
CHFR-221ENST00000542714 NIPA1Q7RTP0 329 aa14.96□□□□□ -0.01
CHFR-221ENST00000542714 GRAMD1CQ8IYS0 662 aa14.96□□□□□ -0.01
CHFR-221ENST00000542714 FAM20AQ96MK3 541 aa14.96□□□□□ -0.01
CHFR-221ENST00000542714 PNMA5Q96PV4 448 aa14.96□□□□□ -0.01
CHFR-221ENST00000542714 NUDT12Q9BQG2 462 aa14.96□□□□□ -0.01
CHFR-221ENST00000542714 TSPY26PQ9H489 355 aa14.96□□□□□ -0.01
CHFR-221ENST00000542714 DISC1Q9NRI5 854 aa14.96□□□□□ -0.01
CHFR-221ENST00000542714 LRWD1Q9UFC0 647 aa14.96□□□□□ -0.01
CHFR-221ENST00000542714 USP25Q9UHP3 1055 aa14.96□□□□□ -0.01
CHFR-221ENST00000542714 PCDHA12Q9UN75 941 aa14.96□□□□□ -0.01
CHFR-221ENST00000542714 MCM3APO60318 1980 aa14.95□□□□□ -0.02
CHFR-221ENST00000542714 MANSC4A6NHS7 340 aaPredicted RBP14.95□□□□□ -0.02
CHFR-221ENST00000542714 IGF2BP3O00425 579 aaKnown RBP eCLIP14.95□□□□□ -0.02
CHFR-221ENST00000542714 MARCH6O60337 910 aa14.95□□□□□ -0.02
CHFR-221ENST00000542714 PSMD10O75832 226 aa14.95□□□□□ -0.02
CHFR-221ENST00000542714 SLFN14P0C7P3 912 aa14.95□□□□□ -0.02
CHFR-221ENST00000542714 BCRP11274 1271 aa14.95□□□□□ -0.02
CHFR-221ENST00000542714 MYCLP12524 364 aaPredicted RBP14.95□□□□□ -0.02
CHFR-221ENST00000542714 CCND2P30279 289 aa14.95□□□□□ -0.02
CHFR-221ENST00000542714 TXLNAP40222 546 aa14.95□□□□□ -0.02
CHFR-221ENST00000542714 SETQ01105 290 aaPredicted RBP14.95□□□□□ -0.02
CHFR-221ENST00000542714 CNTN2Q02246 1040 aa14.95□□□□□ -0.02
CHFR-221ENST00000542714 TYRO3Q06418 890 aa14.95□□□□□ -0.02
CHFR-221ENST00000542714 ANKRD35Q8N283 1001 aa14.95□□□□□ -0.02
CHFR-221ENST00000542714 SHCBP1Q8NEM2 672 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms