RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 TEX2Q8IWB9 1127 aa7.65□□□□□ -1.18
XRCC4-206ENST00000542685 PLEKHO2Q8TD55 490 aa7.65□□□□□ -1.18
XRCC4-206ENST00000542685 MICAL1Q8TDZ2 1067 aa7.65□□□□□ -1.18
XRCC4-206ENST00000542685 ARAP1Q96P48 1450 aa7.65□□□□□ -1.18
XRCC4-206ENST00000542685 CENPJQ9HC77 1338 aaPredicted RBP7.65□□□□□ -1.18
XRCC4-206ENST00000542685 LUC7LQ9NQ29 371 aaKnown RBP7.65□□□□□ -1.18
XRCC4-206ENST00000542685 RAPGEF2Q9Y4G8 1499 aa7.65□□□□□ -1.18
XRCC4-206ENST00000542685 A0A1B0GTL3 188 aa7.64□□□□□ -1.19
XRCC4-206ENST00000542685 SUSD5O60279 629 aa7.64□□□□□ -1.19
XRCC4-206ENST00000542685 FOXD2O60548 495 aaPredicted RBP7.64□□□□□ -1.19
XRCC4-206ENST00000542685 ZBTB7AO95365 584 aa7.64□□□□□ -1.19
XRCC4-206ENST00000542685 ECI1P42126 302 aa7.64□□□□□ -1.19
XRCC4-206ENST00000542685 CYP4F3Q08477 520 aa7.64□□□□□ -1.19
XRCC4-206ENST00000542685 FXNQ16595 210 aa7.64□□□□□ -1.19
XRCC4-206ENST00000542685 VWA3BQ502W6 1294 aa7.64□□□□□ -1.19
XRCC4-206ENST00000542685 B3GNT8Q7Z7M8 397 aa7.64□□□□□ -1.19
XRCC4-206ENST00000542685 ZNF227Q86WZ6 799 aa7.64□□□□□ -1.19
XRCC4-206ENST00000542685 ZNF526Q8TF50 670 aaPredicted RBP7.64□□□□□ -1.19
XRCC4-206ENST00000542685 RTEL1Q9NZ71 1219 aa7.64□□□□□ -1.19
XRCC4-206ENST00000542685 C22orf46C9J442 243 aa7.63□□□□□ -1.19
XRCC4-206ENST00000542685 SNRPB2P08579 225 aaKnown RBP7.63□□□□□ -1.19
XRCC4-206ENST00000542685 BUD31P41223 144 aaPredicted RBP7.63□□□□□ -1.19
XRCC4-206ENST00000542685 SLURP1P55000 103 aa7.63□□□□□ -1.19
XRCC4-206ENST00000542685 CAP1Q01518 475 aa7.63□□□□□ -1.19
XRCC4-206ENST00000542685 ARID5AQ03989 594 aa7.63□□□□□ -1.19
XRCC4-206ENST00000542685 MRM1Q6IN84 353 aaKnown RBP7.63□□□□□ -1.19
XRCC4-206ENST00000542685 SMARCC2Q8TAQ2 1214 aa7.63□□□□□ -1.19
XRCC4-206ENST00000542685 NPLOC4Q8TAT6 608 aa7.63□□□□□ -1.19
XRCC4-206ENST00000542685 ZNF408Q9H9D4 720 aa7.63□□□□□ -1.19
XRCC4-206ENST00000542685 CFAP43Q8NDM7 1665 aa7.63□□□□□ -1.19
XRCC4-206ENST00000542685 FGRP09769 529 aa7.62□□□□□ -1.19
XRCC4-206ENST00000542685 KCNJ6P48051 423 aa7.62□□□□□ -1.19
XRCC4-206ENST00000542685 KCNC1P48547 511 aa7.62□□□□□ -1.19
XRCC4-206ENST00000542685 HTRA3P83110 453 aa7.62□□□□□ -1.19
XRCC4-206ENST00000542685 SF1Q15637 639 aaKnown RBP7.62□□□□□ -1.19
XRCC4-206ENST00000542685 PRSS53Q2L4Q9 553 aa7.62□□□□□ -1.19
XRCC4-206ENST00000542685 IQCEQ6IPM2 695 aa7.62□□□□□ -1.19
XRCC4-206ENST00000542685 CCDC103Q8IW40 242 aa7.62□□□□□ -1.19
XRCC4-206ENST00000542685 ADAM7Q9H2U9 754 aa7.62□□□□□ -1.19
XRCC4-206ENST00000542685 TMEFF2Q9UIK5 374 aaPredicted RBP7.62□□□□□ -1.19
XRCC4-206ENST00000542685 HMGXB3Q12766 1538 aa7.62□□□□□ -1.19
XRCC4-206ENST00000542685 PPM1GO15355 546 aaPredicted RBP7.61□□□□□ -1.19
XRCC4-206ENST00000542685 FPR2P25090 351 aa7.61□□□□□ -1.19
XRCC4-206ENST00000542685 HOXC12P31275 282 aa7.61□□□□□ -1.19
XRCC4-206ENST00000542685 DNAJA1P31689 397 aaKnown RBP7.61□□□□□ -1.19
XRCC4-206ENST00000542685 RPL11P62913 178 aaKnown RBP7.61□□□□□ -1.19
XRCC4-206ENST00000542685 RBM10P98175 930 aaKnown RBP7.61□□□□□ -1.19
XRCC4-206ENST00000542685 CACNB2Q08289 660 aaPredicted RBP7.61□□□□□ -1.19
XRCC4-206ENST00000542685 LIPIQ6XZB0 460 aa7.61□□□□□ -1.19
XRCC4-206ENST00000542685 SAPCD2Q86UD0 394 aa7.61□□□□□ -1.19
XRCC4-206ENST00000542685 DCP2Q8IU60 420 aaKnown RBP7.61□□□□□ -1.19
XRCC4-206ENST00000542685 CPA5Q8WXQ8 436 aa7.61□□□□□ -1.19
XRCC4-206ENST00000542685 DIO2Q92813 273 aa7.61□□□□□ -1.19
XRCC4-206ENST00000542685 NOX5Q96PH1 765 aa7.61□□□□□ -1.19
XRCC4-206ENST00000542685 TINF2Q9BSI4 451 aa7.61□□□□□ -1.19
XRCC4-206ENST00000542685 AP5M1Q9H0R1 490 aa7.61□□□□□ -1.19
XRCC4-206ENST00000542685 TIMM13Q9Y5L4 95 aaPredicted RBP7.61□□□□□ -1.19
XRCC4-206ENST00000542685 ATAD2BQ9ULI0 1458 aa7.61□□□□□ -1.19
XRCC4-206ENST00000542685 ARNTLO00327 626 aa7.6□□□□□ -1.19
XRCC4-206ENST00000542685 MEFVO15553 781 aaPredicted RBP7.6□□□□□ -1.19
XRCC4-206ENST00000542685 GJB6O95452 261 aa7.6□□□□□ -1.19
XRCC4-206ENST00000542685 SYN1P17600 705 aa7.6□□□□□ -1.19
XRCC4-206ENST00000542685 ANP32AP39687 249 aaKnown RBP7.6□□□□□ -1.19
XRCC4-206ENST00000542685 RBM25P49756 843 aaKnown RBP7.6□□□□□ -1.19
XRCC4-206ENST00000542685 E4F1Q66K89 784 aaPredicted RBP7.6□□□□□ -1.19
XRCC4-206ENST00000542685 CEP68Q76N32 757 aa7.6□□□□□ -1.19
XRCC4-206ENST00000542685 MCF2L2Q86YR7 1114 aa7.6□□□□□ -1.19
XRCC4-206ENST00000542685 DDX11Q96FC9 970 aa7.6□□□□□ -1.19
XRCC4-206ENST00000542685 SPATA25Q9BR10 227 aa7.6□□□□□ -1.19
XRCC4-206ENST00000542685 R3HCC1Q9Y3T6 440 aaKnown RBP7.6□□□□□ -1.19
XRCC4-206ENST00000542685 MAPKBP1O60336 1514 aa7.6□□□□□ -1.19
XRCC4-206ENST00000542685 CCER2I3L3R5 266 aa7.59□□□□□ -1.19
XRCC4-206ENST00000542685 SGSM2O43147 1006 aa7.59□□□□□ -1.19
XRCC4-206ENST00000542685 NCLP19338 710 aaKnown RBP7.59□□□□□ -1.19
XRCC4-206ENST00000542685 BCL6P41182 706 aa7.59□□□□□ -1.19
XRCC4-206ENST00000542685 EEPD1Q7L9B9 569 aa7.59□□□□□ -1.19
XRCC4-206ENST00000542685 PPIL6Q8IXY8 311 aa7.59□□□□□ -1.19
XRCC4-206ENST00000542685 ZBTB8AQ96BR9 441 aa7.59□□□□□ -1.19
XRCC4-206ENST00000542685 IPO9Q96P70 1041 aaKnown RBP7.59□□□□□ -1.19
XRCC4-206ENST00000542685 ST7Q9NRC1 585 aa7.59□□□□□ -1.19
XRCC4-206ENST00000542685 MYO1BO43795 1136 aa7.58□□□□□ -1.2
XRCC4-206ENST00000542685 CPP00450 1065 aa7.58□□□□□ -1.2
XRCC4-206ENST00000542685 SCG5P05408 212 aa7.58□□□□□ -1.2
XRCC4-206ENST00000542685 CALD1Q05682 793 aaKnown RBP7.58□□□□□ -1.2
XRCC4-206ENST00000542685 DLX2Q07687 328 aaPredicted RBP7.58□□□□□ -1.2
XRCC4-206ENST00000542685 KCNAB2Q13303 367 aa7.58□□□□□ -1.2
XRCC4-206ENST00000542685 SMAD4Q13485 552 aaKnown RBP7.58□□□□□ -1.2
XRCC4-206ENST00000542685 KREMEN2Q8NCW0 462 aa7.58□□□□□ -1.2
XRCC4-206ENST00000542685 HNRNPLLQ8WVV9 542 aaKnown RBP7.58□□□□□ -1.2
XRCC4-206ENST00000542685 TRMT2BQ96GJ1 504 aaKnown RBP7.58□□□□□ -1.2
XRCC4-206ENST00000542685 TMEM169Q96HH4 297 aa7.58□□□□□ -1.2
XRCC4-206ENST00000542685 SYT3Q9BQG1 590 aa7.58□□□□□ -1.2
XRCC4-206ENST00000542685 PALD1Q9ULE6 856 aa7.58□□□□□ -1.2
XRCC4-206ENST00000542685 TIAM1Q13009 1591 aa7.58□□□□□ -1.2
XRCC4-206ENST00000542685 SH3D21A4FU49 640 aa7.57□□□□□ -1.2
XRCC4-206ENST00000542685 C8BP07358 591 aa7.57□□□□□ -1.2
XRCC4-206ENST00000542685 CYP2C8P10632 490 aa7.57□□□□□ -1.2
XRCC4-206ENST00000542685 GFRA1P56159 465 aa7.57□□□□□ -1.2
XRCC4-206ENST00000542685 HSP90AA2PQ14568 343 aaPredicted RBP7.57□□□□□ -1.2
XRCC4-206ENST00000542685 NT5DC1Q5TFE4 455 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms