RNA–Protein interactions for RNA: ENST00000542680.1

CACNA1C-IT3-201, CACNA1C intronic transcript 3, humanhuman

TSL 3 BASIC

Gene CACNA1C-IT3, Length 622 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-IT3-201ENST00000542680 OGDHLQ9ULD0 1010 aa14.04□□□□□ -0.16
CACNA1C-IT3-201ENST00000542680 PCDHA6Q9UN73 950 aa14.04□□□□□ -0.16
CACNA1C-IT3-201ENST00000542680 PCDHA8Q9Y5H6 950 aa14.04□□□□□ -0.16
CACNA1C-IT3-201ENST00000542680 WDFY4Q6ZS81 3184 aa14.04□□□□□ -0.16
CACNA1C-IT3-201ENST00000542680 HERVK_113P62684 666 aa14.03□□□□□ -0.16
CACNA1C-IT3-201ENST00000542680 LRRC26Q2I0M4 334 aa14.03□□□□□ -0.16
CACNA1C-IT3-201ENST00000542680 USH1GQ495M9 461 aa14.03□□□□□ -0.16
CACNA1C-IT3-201ENST00000542680 PARK7Q99497 189 aaKnown RBP14.03□□□□□ -0.16
CACNA1C-IT3-201ENST00000542680 NAP1L4Q99733 375 aaKnown RBP14.03□□□□□ -0.16
CACNA1C-IT3-201ENST00000542680 FBXO40Q9UH90 709 aa14.03□□□□□ -0.16
CACNA1C-IT3-201ENST00000542680 RABGAP1Q9Y3P9 1069 aa14.03□□□□□ -0.16
CACNA1C-IT3-201ENST00000542680 ELP1O95163 1332 aa14.03□□□□□ -0.16
CACNA1C-IT3-201ENST00000542680 YEATS4O95619 227 aa14.02□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 GCLCP48506 637 aaPredicted RBP14.02□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 NASPP49321 788 aaPredicted RBP14.02□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 DNM1Q05193 864 aaKnown RBP14.02□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 TMEM132BQ14DG7 1078 aa14.02□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 NONOQ15233 471 aaKnown RBP eCLIP14.02□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 SHHQ15465 462 aa14.02□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.02□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 CHST13Q8NET6 341 aa14.02□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 LBHD1Q9BQE6 289 aaPredicted RBP14.02□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 EHMT1Q9H9B1 1298 aa14.02□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 RAVER2Q9HCJ3 691 aaKnown RBP14.02□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 RTEL1Q9NZ71 1219 aa14.02□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 THEGQ9P2T0 379 aa14.02□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 CEP131Q9UPN4 1083 aa14.02□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 MYO9BQ13459 2157 aa14.01□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 GCOM1H8Y6P7 765 aaPredicted RBP14.01□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 MEIS2O14770 477 aa14.01□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 OPLAHO14841 1288 aa14.01□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 SLC25A27O95847 323 aa14.01□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 POLR2MP0CAP2 368 aa14.01□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 MCM4P33991 863 aa14.01□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 STAT3P40763 770 aa14.01□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 HSD17B4P51659 736 aa14.01□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 SNAP25P60880 206 aa14.01□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 SNRNP48Q6IEG0 339 aaKnown RBP14.01□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 SAMD1Q6SPF0 538 aaPredicted RBP14.01□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 PIK3AP1Q6ZUJ8 805 aa14.01□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 RIOX2Q8IUF8 465 aa14.01□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 AGBL1Q96MI9 1066 aa14.01□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 SMCHD1A6NHR9 2005 aa14.01□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 FRMPD3Q5JV73 1810 aa14.01□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 SPDYE3A6NKU9 549 aa14□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 ALAS1P13196 640 aa14□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 MRE11P49959 708 aa14□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 MRPS5P82675 430 aaKnown RBP14□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 C9orf50Q5SZB4 431 aa14□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 ANO1Q5XXA6 986 aa14□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 MOXD1Q6UVY6 613 aa14□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 CPXCR1Q8N123 301 aa14□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 SHCBP1Q8NEM2 672 aa14□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 KCNG4Q8TDN1 519 aa14□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 SMCR8Q8TEV9 937 aaPredicted RBP14□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 CLEC4DQ8WXI8 215 aa14□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 TRERF1Q96PN7 1200 aa14□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 USP28Q96RU2 1077 aa14□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 SPATC1LQ9H0A9 340 aa14□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 ACAD9Q9H845 621 aa14□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 RNF146Q9NTX7 359 aa14□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 CFAP54Q96N23 3096 aa14□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 LAD1O00515 517 aa13.99□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 TNPO2O14787 897 aaKnown RBP13.99□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 HMGCRP04035 888 aa13.99□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 CYP2C8P10632 490 aa13.99□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 GCFC2P16383 781 aaKnown RBP13.99□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 NCLP19338 710 aaKnown RBP13.99□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 GRIN2CQ14957 1233 aa13.99□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 TTC38Q5R3I4 469 aa13.99□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 FAM173BQ6P4H8 233 aa13.99□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 NEK8Q86SG6 692 aa13.99□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 SPATA32Q96LK8 384 aa13.99□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 NECAB3Q96P71 396 aaPredicted RBP13.99□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 ANO3Q9BYT9 981 aa13.99□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.99□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 MORF4L1Q9UBU8 362 aa13.99□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 RCOR1Q9UKL0 485 aa13.99□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 CNPY2Q9Y2B0 182 aa13.99□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 MYH7BA7E2Y1 1941 aa13.99□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 PLXNB2O15031 1838 aa13.99□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 CHD7Q9P2D1 2997 aa13.98□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 FRMPD4Q14CM0 1322 aa13.98□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 PPP6R2O75170 966 aa13.98□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 CNMDO75829 334 aa13.98□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 CFBP00751 764 aa13.98□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 SREBF1P36956 1147 aa13.98□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 TOB1P50616 345 aaPredicted RBP13.98□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 USP11P51784 963 aa13.98□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 CCNA1P78396 465 aa13.98□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 SLC39A14Q15043 492 aa13.98□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 EARS2Q5JPH6 523 aaKnown RBP13.98□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 JAKMIP3Q5VZ66 844 aa13.98□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 USP17L6PQ6QN14 398 aa13.98□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 LINC00301Q8NCQ3 95 aa13.98□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 RASGRP4Q8TDF6 673 aa13.98□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 TBCKQ8TEA7 893 aa13.98□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 LEO1Q8WVC0 666 aaPredicted RBP13.98□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 MROH8Q9H579 483 aa13.98□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 EPHX3Q9H6B9 360 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms