RNA–Protein interactions for RNA: ENST00000541866.5

COPS7A-212, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-212ENST00000541866 PPM1EQ8WY54 764 aa16.59■□□□□ 0.25
COPS7A-212ENST00000541866 MAD2L2Q9UI95 211 aa16.59■□□□□ 0.25
COPS7A-212ENST00000541866 DDX41Q9UJV9 622 aaKnown RBP16.59■□□□□ 0.25
COPS7A-212ENST00000541866 LAMA4Q16363 1823 aa16.59■□□□□ 0.25
COPS7A-212ENST00000541866 PITPNM1O00562 1244 aa16.58■□□□□ 0.24
COPS7A-212ENST00000541866 MMP3P08254 477 aa16.58■□□□□ 0.24
COPS7A-212ENST00000541866 ATP2A2P16615 1042 aaKnown RBP16.58■□□□□ 0.24
COPS7A-212ENST00000541866 IGFBP4P22692 258 aa16.58■□□□□ 0.24
COPS7A-212ENST00000541866 HSD17B4P51659 736 aa16.58■□□□□ 0.24
COPS7A-212ENST00000541866 RABGGTBP53611 331 aa16.58■□□□□ 0.24
COPS7A-212ENST00000541866 LAMC2Q13753 1193 aa16.58■□□□□ 0.24
COPS7A-212ENST00000541866 PTGISQ16647 500 aa16.58■□□□□ 0.24
COPS7A-212ENST00000541866 DGKDQ16760 1214 aa16.58■□□□□ 0.24
COPS7A-212ENST00000541866 DHX37Q8IY37 1157 aaKnown RBP16.58■□□□□ 0.24
COPS7A-212ENST00000541866 SAMD3Q8N6K7 520 aa16.58■□□□□ 0.24
COPS7A-212ENST00000541866 CCDC155Q8N6L0 562 aa16.58■□□□□ 0.24
COPS7A-212ENST00000541866 IQCF3P0C7M6 154 aa16.57■□□□□ 0.24
COPS7A-212ENST00000541866 GRM4Q14833 912 aa16.57■□□□□ 0.24
COPS7A-212ENST00000541866 KCNV1Q6PIU1 500 aa16.57■□□□□ 0.24
COPS7A-212ENST00000541866 CATIPQ7Z7H3 387 aa16.57■□□□□ 0.24
COPS7A-212ENST00000541866 C7orf31Q8N865 590 aa16.57■□□□□ 0.24
COPS7A-212ENST00000541866 MTMR8Q96EF0 704 aa16.57■□□□□ 0.24
COPS7A-212ENST00000541866 YBX2Q9Y2T7 364 aaKnown RBP16.57■□□□□ 0.24
COPS7A-212ENST00000541866 PCDHA11Q9Y5I1 949 aa16.57■□□□□ 0.24
COPS7A-212ENST00000541866 PRUNE2Q8WUY3 3088 aa16.57■□□□□ 0.24
COPS7A-212ENST00000541866 E7EWF7 191 aa16.56■□□□□ 0.24
COPS7A-212ENST00000541866 GCOM1H8Y6P7 765 aaPredicted RBP16.56■□□□□ 0.24
COPS7A-212ENST00000541866 PPP1R11O60927 126 aaPredicted RBP16.56■□□□□ 0.24
COPS7A-212ENST00000541866 POLR2MP0CAP2 368 aa16.56■□□□□ 0.24
COPS7A-212ENST00000541866 HOXA13P31271 388 aaPredicted RBP16.56■□□□□ 0.24
COPS7A-212ENST00000541866 TMEM67Q5HYA8 995 aa16.56■□□□□ 0.24
COPS7A-212ENST00000541866 PPP2R2DQ66LE6 453 aa16.56■□□□□ 0.24
COPS7A-212ENST00000541866 STOX1Q6ZVD7 989 aa16.56■□□□□ 0.24
COPS7A-212ENST00000541866 SYMPKQ92797 1274 aaKnown RBP16.56■□□□□ 0.24
COPS7A-212ENST00000541866 PIGSQ96S52 555 aa16.56■□□□□ 0.24
COPS7A-212ENST00000541866 PDCD2LQ9BRP1 358 aa16.56■□□□□ 0.24
COPS7A-212ENST00000541866 ALG1Q9BT22 464 aa16.56■□□□□ 0.24
COPS7A-212ENST00000541866 KATNAL1Q9BW62 490 aa16.56■□□□□ 0.24
COPS7A-212ENST00000541866 RIOX1Q9H6W3 641 aa16.56■□□□□ 0.24
COPS7A-212ENST00000541866 MYO9BQ13459 2157 aa16.55■□□□□ 0.24
COPS7A-212ENST00000541866 TTC28Q96AY4 2481 aa16.55■□□□□ 0.24
COPS7A-212ENST00000541866 PNMA6FA0A0J9YX94 578 aa16.55■□□□□ 0.24
COPS7A-212ENST00000541866 OPLAHO14841 1288 aa16.55■□□□□ 0.24
COPS7A-212ENST00000541866 SGSM2O43147 1006 aa16.55■□□□□ 0.24
COPS7A-212ENST00000541866 MYOGP15173 224 aa16.55■□□□□ 0.24
COPS7A-212ENST00000541866 GHRHRQ02643 423 aa16.55■□□□□ 0.24
COPS7A-212ENST00000541866 GDF6Q6KF10 455 aaPredicted RBP16.55■□□□□ 0.24
COPS7A-212ENST00000541866 VSIG10LQ86VR7 867 aa16.55■□□□□ 0.24
COPS7A-212ENST00000541866 SESTD1Q86VW0 696 aa16.55■□□□□ 0.24
COPS7A-212ENST00000541866 FCHSD1Q86WN1 690 aa16.55■□□□□ 0.24
COPS7A-212ENST00000541866 USP38Q8NB14 1042 aa16.55■□□□□ 0.24
COPS7A-212ENST00000541866 CAGE1Q8TC20 777 aa16.55■□□□□ 0.24
COPS7A-212ENST00000541866 AFAP1L1Q8TED9 768 aa16.55■□□□□ 0.24
COPS7A-212ENST00000541866 KAT2BQ92831 832 aa16.55■□□□□ 0.24
COPS7A-212ENST00000541866 EMID1Q96A84 441 aaPredicted RBP16.55■□□□□ 0.24
COPS7A-212ENST00000541866 VWCEQ96DN2 955 aa16.55■□□□□ 0.24
COPS7A-212ENST00000541866 SCN10AQ9Y5Y9 1956 aa16.55■□□□□ 0.24
COPS7A-212ENST00000541866 KIF28PB7ZC32 967 aa16.54■□□□□ 0.24
COPS7A-212ENST00000541866 PPFIA4O75335 1185 aa16.54■□□□□ 0.24
COPS7A-212ENST00000541866 CCND2P30279 289 aa16.54■□□□□ 0.24
COPS7A-212ENST00000541866 PSEN2P49810 448 aa16.54■□□□□ 0.24
COPS7A-212ENST00000541866 TROAPQ12815 778 aa16.54■□□□□ 0.24
COPS7A-212ENST00000541866 PGM5Q15124 567 aa16.54■□□□□ 0.24
COPS7A-212ENST00000541866 CCDC85BQ15834 202 aaPredicted RBP16.54■□□□□ 0.24
COPS7A-212ENST00000541866 PPTC7Q8NI37 304 aa16.54■□□□□ 0.24
COPS7A-212ENST00000541866 PHOSPHO2Q8TCD6 241 aa16.54■□□□□ 0.24
COPS7A-212ENST00000541866 PIBF1Q8WXW3 757 aa16.54■□□□□ 0.24
COPS7A-212ENST00000541866 SENP2Q9HC62 589 aa16.54■□□□□ 0.24
COPS7A-212ENST00000541866 HDAC6Q9UBN7 1215 aa16.54■□□□□ 0.24
COPS7A-212ENST00000541866 MYH6P13533 1939 aa16.53■□□□□ 0.24
COPS7A-212ENST00000541866 SORBS3O60504 671 aa16.53■□□□□ 0.24
COPS7A-212ENST00000541866 TGFB3P10600 412 aa16.53■□□□□ 0.24
COPS7A-212ENST00000541866 SELPP16109 830 aa16.53■□□□□ 0.24
COPS7A-212ENST00000541866 ADGRE1Q14246 886 aa16.53■□□□□ 0.24
COPS7A-212ENST00000541866 MFSD10Q14728 455 aa16.53■□□□□ 0.24
COPS7A-212ENST00000541866 KIAA0753Q2KHM9 967 aa16.53■□□□□ 0.24
COPS7A-212ENST00000541866 CASC1Q6TDU7 716 aa16.53■□□□□ 0.24
COPS7A-212ENST00000541866 MAP4K1Q92918 833 aa16.53■□□□□ 0.24
COPS7A-212ENST00000541866 SPATA33Q96N06 139 aa16.53■□□□□ 0.24
COPS7A-212ENST00000541866 SLC9A7Q96T83 725 aa16.53■□□□□ 0.24
COPS7A-212ENST00000541866 MLXIPQ9HAP2 919 aa16.53■□□□□ 0.24
COPS7A-212ENST00000541866 GTF2IRD1Q9UHL9 959 aa16.53■□□□□ 0.24
COPS7A-212ENST00000541866 RBM8AQ9Y5S9 174 aaKnown RBP16.53■□□□□ 0.24
COPS7A-212ENST00000541866 CYTH3O43739 400 aa16.52■□□□□ 0.24
COPS7A-212ENST00000541866 PARNO95453 639 aaKnown RBP16.52■□□□□ 0.24
COPS7A-212ENST00000541866 GGPS1O95749 300 aa16.52■□□□□ 0.24
COPS7A-212ENST00000541866 ZNF286BP0CG31 522 aa16.52■□□□□ 0.24
COPS7A-212ENST00000541866 PLA2G5P39877 138 aa16.52■□□□□ 0.24
COPS7A-212ENST00000541866 KCNJ6P48051 423 aa16.52■□□□□ 0.24
COPS7A-212ENST00000541866 SLC35G1Q2M3R5 365 aa16.52■□□□□ 0.24
COPS7A-212ENST00000541866 GNPTABQ3T906 1256 aa16.52■□□□□ 0.24
COPS7A-212ENST00000541866 TJAP1Q5JTD0 557 aa16.52■□□□□ 0.24
COPS7A-212ENST00000541866 CELF3Q5SZQ8 465 aaKnown RBP16.52■□□□□ 0.24
COPS7A-212ENST00000541866 MYSM1Q5VVJ2 828 aa16.52■□□□□ 0.24
COPS7A-212ENST00000541866 LRRC8DQ7L1W4 858 aa16.52■□□□□ 0.24
COPS7A-212ENST00000541866 CTCFLQ8NI51 663 aaPredicted RBP16.52■□□□□ 0.24
COPS7A-212ENST00000541866 IGDCC4Q8TDY8 1250 aa16.52■□□□□ 0.24
COPS7A-212ENST00000541866 ZFP91Q96JP5 570 aaPredicted RBP16.52■□□□□ 0.24
COPS7A-212ENST00000541866 TAF6LQ9Y6J9 622 aa16.52■□□□□ 0.24
COPS7A-212ENST00000541866 RGS20O76081 388 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms