RNA–Protein interactions for RNA: ENST00000541841.1

CIT-211, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-211ENST00000541841 CCDC103Q8IW40 242 aa7.37□□□□□ -1.23
CIT-211ENST00000541841 SP8Q8IXZ3 490 aa7.37□□□□□ -1.23
CIT-211ENST00000541841 PEX11GQ96HA9 241 aa7.37□□□□□ -1.23
CIT-211ENST00000541841 RNF38Q9H0F5 515 aa7.37□□□□□ -1.23
CIT-211ENST00000541841 NKX2-4Q9H2Z4 354 aa7.37□□□□□ -1.23
CIT-211ENST00000541841 LUC7LQ9NQ29 371 aaKnown RBP7.37□□□□□ -1.23
CIT-211ENST00000541841 TRBV23OR9-2A0A075B6M9 112 aa7.36□□□□□ -1.23
CIT-211ENST00000541841 DDAH1O94760 285 aa7.36□□□□□ -1.23
CIT-211ENST00000541841 STK10O94804 968 aaKnown RBP7.36□□□□□ -1.23
CIT-211ENST00000541841 HTRA3P83110 453 aa7.36□□□□□ -1.23
CIT-211ENST00000541841 ZNF227Q86WZ6 799 aa7.36□□□□□ -1.23
CIT-211ENST00000541841 CRACR2BQ8N4Y2 399 aaPredicted RBP7.36□□□□□ -1.23
CIT-211ENST00000541841 NPLOC4Q8TAT6 608 aa7.36□□□□□ -1.23
CIT-211ENST00000541841 DDX11Q96FC9 970 aa7.36□□□□□ -1.23
CIT-211ENST00000541841 MMP19Q99542 508 aa7.36□□□□□ -1.23
CIT-211ENST00000541841 CYP26B1Q9NR63 512 aa7.36□□□□□ -1.23
CIT-211ENST00000541841 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.36□□□□□ -1.23
CIT-211ENST00000541841 LRP2BPQ9P2M1 347 aa7.36□□□□□ -1.23
CIT-211ENST00000541841 FBXL7Q9UJT9 491 aa7.36□□□□□ -1.23
CIT-211ENST00000541841 NUDT5Q9UKK9 219 aa7.36□□□□□ -1.23
CIT-211ENST00000541841 SUSD5O60279 629 aa7.35□□□□□ -1.23
CIT-211ENST00000541841 MARCH6O60337 910 aa7.35□□□□□ -1.23
CIT-211ENST00000541841 RAB11FIP3O75154 756 aa7.35□□□□□ -1.23
CIT-211ENST00000541841 SNRPB2P08579 225 aaKnown RBP7.35□□□□□ -1.23
CIT-211ENST00000541841 NAT2P11245 290 aa7.35□□□□□ -1.23
CIT-211ENST00000541841 ZNF143P52747 638 aaPredicted RBP7.35□□□□□ -1.23
CIT-211ENST00000541841 LIPIQ6XZB0 460 aa7.35□□□□□ -1.23
CIT-211ENST00000541841 B3GNT8Q7Z7M8 397 aa7.35□□□□□ -1.23
CIT-211ENST00000541841 FAM26EQ8N5C1 309 aa7.35□□□□□ -1.23
CIT-211ENST00000541841 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.35□□□□□ -1.23
CIT-211ENST00000541841 PRKAG3Q9UGI9 489 aa7.35□□□□□ -1.23
CIT-211ENST00000541841 C22orf46C9J442 243 aa7.34□□□□□ -1.23
CIT-211ENST00000541841 C8BP07358 591 aa7.34□□□□□ -1.23
CIT-211ENST00000541841 KCNC1P48547 511 aa7.34□□□□□ -1.23
CIT-211ENST00000541841 SMAD4Q13485 552 aaKnown RBP7.34□□□□□ -1.23
CIT-211ENST00000541841 SAPCD2Q86UD0 394 aa7.34□□□□□ -1.23
CIT-211ENST00000541841 STK32CQ86UX6 486 aa7.34□□□□□ -1.23
CIT-211ENST00000541841 NLRP10Q86W26 655 aa7.34□□□□□ -1.23
CIT-211ENST00000541841 VPS37DQ86XT2 251 aa7.34□□□□□ -1.23
CIT-211ENST00000541841 KRTAP4-2Q9BYR5 136 aa7.34□□□□□ -1.23
CIT-211ENST00000541841 ZNF408Q9H9D4 720 aa7.34□□□□□ -1.23
CIT-211ENST00000541841 MRPL42Q9Y6G3 142 aaKnown RBP7.34□□□□□ -1.23
CIT-211ENST00000541841 SGSM2O43147 1006 aa7.33□□□□□ -1.24
CIT-211ENST00000541841 PRICKLE3O43900 615 aaPredicted RBP7.33□□□□□ -1.24
CIT-211ENST00000541841 LCP1P13796 627 aa7.33□□□□□ -1.24
CIT-211ENST00000541841 SYN1P17600 705 aa7.33□□□□□ -1.24
CIT-211ENST00000541841 CACNB2Q08289 660 aaPredicted RBP7.33□□□□□ -1.24
CIT-211ENST00000541841 SKOR2Q2VWA4 1001 aaPredicted RBP7.33□□□□□ -1.24
CIT-211ENST00000541841 TNNI3KQ59H18 835 aa7.33□□□□□ -1.24
CIT-211ENST00000541841 SOGA3Q5TF21 947 aa7.33□□□□□ -1.24
CIT-211ENST00000541841 NT5DC1Q5TFE4 455 aa7.33□□□□□ -1.24
CIT-211ENST00000541841 ZBTB8AQ96BR9 441 aa7.33□□□□□ -1.24
CIT-211ENST00000541841 ST7Q9NRC1 585 aa7.33□□□□□ -1.24
CIT-211ENST00000541841 GJB6O95452 261 aa7.32□□□□□ -1.24
CIT-211ENST00000541841 BCL6P41182 706 aa7.32□□□□□ -1.24
CIT-211ENST00000541841 GRIA2P42262 883 aa7.32□□□□□ -1.24
CIT-211ENST00000541841 KCNJ6P48051 423 aa7.32□□□□□ -1.24
CIT-211ENST00000541841 PTPROQ16827 1216 aa7.32□□□□□ -1.24
CIT-211ENST00000541841 DENND5AQ6IQ26 1287 aa7.32□□□□□ -1.24
CIT-211ENST00000541841 NOL8Q76FK4 1167 aaKnown RBP7.32□□□□□ -1.24
CIT-211ENST00000541841 CEP68Q76N32 757 aa7.32□□□□□ -1.24
CIT-211ENST00000541841 HNRNPLLQ8WVV9 542 aaKnown RBP7.32□□□□□ -1.24
CIT-211ENST00000541841 KRTAP9-3Q9BYQ3 159 aa7.32□□□□□ -1.24
CIT-211ENST00000541841 SPATA6Q9NWH7 488 aaPredicted RBP7.32□□□□□ -1.24
CIT-211ENST00000541841 SLC9A5Q14940 896 aa7.31□□□□□ -1.24
CIT-211ENST00000541841 FERMT3Q86UX7 667 aa7.31□□□□□ -1.24
CIT-211ENST00000541841 DCP2Q8IU60 420 aaKnown RBP7.31□□□□□ -1.24
CIT-211ENST00000541841 CELF2-AS1Q8N7Q2 184 aa7.31□□□□□ -1.24
CIT-211ENST00000541841 TMEM145Q8NBT3 493 aa7.31□□□□□ -1.24
CIT-211ENST00000541841 KREMEN2Q8NCW0 462 aa7.31□□□□□ -1.24
CIT-211ENST00000541841 CXorf38Q8TB03 319 aa7.31□□□□□ -1.24
CIT-211ENST00000541841 DIO2Q92813 273 aa7.31□□□□□ -1.24
CIT-211ENST00000541841 GORASP1Q9BQQ3 440 aa7.31□□□□□ -1.24
CIT-211ENST00000541841 PALD1Q9ULE6 856 aa7.31□□□□□ -1.24
CIT-211ENST00000541841 ZBTB7AO95365 584 aa7.3□□□□□ -1.24
CIT-211ENST00000541841 RPL11P62913 178 aaKnown RBP7.3□□□□□ -1.24
CIT-211ENST00000541841 CAP1Q01518 475 aa7.3□□□□□ -1.24
CIT-211ENST00000541841 RTP5Q14D33 572 aa7.3□□□□□ -1.24
CIT-211ENST00000541841 FXNQ16595 210 aa7.3□□□□□ -1.24
CIT-211ENST00000541841 DHX37Q8IY37 1157 aaKnown RBP7.3□□□□□ -1.24
CIT-211ENST00000541841 CARFQ8N187 725 aa7.3□□□□□ -1.24
CIT-211ENST00000541841 RCBTB1Q8NDN9 531 aa7.3□□□□□ -1.24
CIT-211ENST00000541841 CPA5Q8WXQ8 436 aa7.3□□□□□ -1.24
CIT-211ENST00000541841 DDX1Q92499 740 aaKnown RBP7.3□□□□□ -1.24
CIT-211ENST00000541841 TIMM13Q9Y5L4 95 aaPredicted RBP7.3□□□□□ -1.24
CIT-211ENST00000541841 hCG_2014768A0A024R1R8 64 aa7.29□□□□□ -1.24
CIT-211ENST00000541841 SH3D21A4FU49 640 aa7.29□□□□□ -1.24
CIT-211ENST00000541841 MEFVO15553 781 aaPredicted RBP7.29□□□□□ -1.24
CIT-211ENST00000541841 HOXC12P31275 282 aa7.29□□□□□ -1.24
CIT-211ENST00000541841 STAT5AP42229 794 aa7.29□□□□□ -1.24
CIT-211ENST00000541841 IGBP1P78318 339 aa7.29□□□□□ -1.24
CIT-211ENST00000541841 CD300LDQ6UXZ3 194 aa7.29□□□□□ -1.24
CIT-211ENST00000541841 ETV3LQ6ZN32 361 aa7.29□□□□□ -1.24
CIT-211ENST00000541841 FRMD5Q7Z6J6 570 aa7.29□□□□□ -1.24
CIT-211ENST00000541841 PPIL6Q8IXY8 311 aa7.29□□□□□ -1.24
CIT-211ENST00000541841 TRMT2BQ96GJ1 504 aaKnown RBP7.29□□□□□ -1.24
CIT-211ENST00000541841 MRFAP1L1Q96HT8 127 aa7.29□□□□□ -1.24
CIT-211ENST00000541841 BDH2Q9BUT1 245 aa7.29□□□□□ -1.24
CIT-211ENST00000541841 AP5M1Q9H0R1 490 aa7.29□□□□□ -1.24
CIT-211ENST00000541841 USP40Q9NVE5 1235 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms