RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 RESP18Q5W5W9 173 aa31.52■■■□□ 2.64
CCM2-218ENST00000541586 SLC30A10Q6XR72 485 aa31.52■■■□□ 2.64
CCM2-218ENST00000541586 FMR1NBQ8N0W7 255 aaPredicted RBP31.52■■■□□ 2.64
CCM2-218ENST00000541586 NUDT12Q9BQG2 462 aa31.52■■■□□ 2.64
CCM2-218ENST00000541586 CLSTN2Q9H4D0 955 aa31.52■■■□□ 2.64
CCM2-218ENST00000541586 ZSWIM8A7E2V4 1837 aa31.52■■■□□ 2.64
CCM2-218ENST00000541586 SLC15A5A6NIM6 579 aa31.52■■■□□ 2.64
CCM2-218ENST00000541586 GCOM1H8Y6P7 765 aaPredicted RBP31.52■■■□□ 2.64
CCM2-218ENST00000541586 POLR2MP0CAP2 368 aa31.52■■■□□ 2.64
CCM2-218ENST00000541586 GRB14Q14449 540 aa31.52■■■□□ 2.64
CCM2-218ENST00000541586 ARHGEF6Q15052 776 aa31.52■■■□□ 2.64
CCM2-218ENST00000541586 PURBQ96QR8 312 aaKnown RBP31.52■■■□□ 2.64
CCM2-218ENST00000541586 GABRQQ9UN88 632 aa31.52■■■□□ 2.64
CCM2-218ENST00000541586 CASP8AP2Q9UKL3 1982 aa31.51■■■□□ 2.64
CCM2-218ENST00000541586 MEIS2O14770 477 aa31.51■■■□□ 2.63
CCM2-218ENST00000541586 LETM1O95202 739 aaPredicted RBP31.51■■■□□ 2.63
CCM2-218ENST00000541586 PFKFB1P16118 471 aa31.51■■■□□ 2.63
CCM2-218ENST00000541586 LETM2Q2VYF4 491 aa31.51■■■□□ 2.63
CCM2-218ENST00000541586 C4orf32Q8N8J7 132 aa31.51■■■□□ 2.63
CCM2-218ENST00000541586 ZNF579Q8NAF0 562 aaKnown RBP31.51■■■□□ 2.63
CCM2-218ENST00000541586 FERMT2Q96AC1 680 aa31.51■■■□□ 2.63
CCM2-218ENST00000541586 GJD2Q9UKL4 321 aa31.51■■■□□ 2.63
CCM2-218ENST00000541586 TRIM17Q9Y577 477 aa31.51■■■□□ 2.63
CCM2-218ENST00000541586 CYP2B6P20813 491 aa31.5■■■□□ 2.63
CCM2-218ENST00000541586 HOXD10P28358 340 aa31.5■■■□□ 2.63
CCM2-218ENST00000541586 CAMK4Q16566 473 aa31.5■■■□□ 2.63
CCM2-218ENST00000541586 MORN1Q5T089 497 aa31.5■■■□□ 2.63
CCM2-218ENST00000541586 FCHSD1Q86WN1 690 aa31.5■■■□□ 2.63
CCM2-218ENST00000541586 GAS2L3Q86XJ1 694 aa31.5■■■□□ 2.63
CCM2-218ENST00000541586 ABRAQ8N0Z2 381 aa31.5■■■□□ 2.63
CCM2-218ENST00000541586 PFASO15067 1338 aa31.5■■■□□ 2.63
CCM2-218ENST00000541586 POTEB2H3BUK9 544 aa31.49■■■□□ 2.63
CCM2-218ENST00000541586 COBLO75128 1261 aa31.49■■■□□ 2.63
CCM2-218ENST00000541586 CNTN2Q02246 1040 aa31.49■■■□□ 2.63
CCM2-218ENST00000541586 PRKCZQ05513 592 aa31.49■■■□□ 2.63
CCM2-218ENST00000541586 HPSEQ9Y251 543 aa31.49■■■□□ 2.63
CCM2-218ENST00000541586 FAM237AA0A1B0GTK4 181 aa31.49■■■□□ 2.63
CCM2-218ENST00000541586 CCNT1O60563 726 aaKnown RBP31.49■■■□□ 2.63
CCM2-218ENST00000541586 FLT3LGP49771 235 aa31.49■■■□□ 2.63
CCM2-218ENST00000541586 LRSAM1Q6UWE0 723 aa31.49■■■□□ 2.63
CCM2-218ENST00000541586 CSRNP2Q9H175 543 aa31.49■■■□□ 2.63
CCM2-218ENST00000541586 KINO60870 393 aaKnown RBP31.48■■■□□ 2.63
CCM2-218ENST00000541586 MAP2K5Q13163 448 aa31.48■■■□□ 2.63
CCM2-218ENST00000541586 SPECC1Q5M775 1068 aa31.48■■■□□ 2.63
CCM2-218ENST00000541586 TNMDQ9H2S6 317 aa31.48■■■□□ 2.63
CCM2-218ENST00000541586 MGAMO43451 1857 aa31.48■■■□□ 2.63
CCM2-218ENST00000541586 HSD17B4P51659 736 aa31.47■■■□□ 2.63
CCM2-218ENST00000541586 DHX30Q7L2E3 1194 aaKnown RBP eCLIP31.47■■■□□ 2.63
CCM2-218ENST00000541586 SYTL5Q8TDW5 730 aaPredicted RBP31.47■■■□□ 2.63
CCM2-218ENST00000541586 SOCS4Q8WXH5 440 aa31.47■■■□□ 2.63
CCM2-218ENST00000541586 SRRDQ9UH36 339 aa31.47■■■□□ 2.63
CCM2-218ENST00000541586 EDIL3O43854 480 aa31.46■■■□□ 2.63
CCM2-218ENST00000541586 AP3B2Q13367 1082 aa31.46■■■□□ 2.63
CCM2-218ENST00000541586 ARL6IP4Q66PJ3 421 aaKnown RBP31.46■■■□□ 2.63
CCM2-218ENST00000541586 OTOP1Q7RTM1 612 aa31.46■■■□□ 2.63
CCM2-218ENST00000541586 TMEM60Q9H2L4 133 aa31.46■■■□□ 2.63
CCM2-218ENST00000541586 COL20A1Q9P218 1284 aa31.46■■■□□ 2.63
CCM2-218ENST00000541586 PLXNB2O15031 1838 aa31.46■■■□□ 2.63
CCM2-218ENST00000541586 FSD2A1L4K1 749 aa31.46■■■□□ 2.63
CCM2-218ENST00000541586 TAAR1Q96RJ0 339 aa31.46■■■□□ 2.63
CCM2-218ENST00000541586 ZNFX1Q9P2E3 1918 aaKnown RBP31.45■■■□□ 2.63
CCM2-218ENST00000541586 VWA3AA6NCI4 1184 aa31.45■■■□□ 2.63
CCM2-218ENST00000541586 ZNF202O95125 648 aa31.45■■■□□ 2.63
CCM2-218ENST00000541586 GNRH1P01148 92 aa31.45■■■□□ 2.63
CCM2-218ENST00000541586 RGS2P41220 211 aa31.45■■■□□ 2.63
CCM2-218ENST00000541586 ORC2Q13416 577 aaPredicted RBP31.45■■■□□ 2.63
CCM2-218ENST00000541586 MCTP2Q6DN12 878 aa31.45■■■□□ 2.63
CCM2-218ENST00000541586 NPLOC4Q8TAT6 608 aa31.45■■■□□ 2.63
CCM2-218ENST00000541586 ANO3Q9BYT9 981 aa31.45■■■□□ 2.63
CCM2-218ENST00000541586 SLC5A4Q9NY91 659 aa31.45■■■□□ 2.63
CCM2-218ENST00000541586 MAP3K20Q9NYL2 800 aaKnown RBP31.45■■■□□ 2.63
CCM2-218ENST00000541586 DNAJC25-GNG10A0A024R161 153 aa31.44■■■□□ 2.62
CCM2-218ENST00000541586 GOLGA6L3A6NEY3 463 aa31.44■■■□□ 2.62
CCM2-218ENST00000541586 PIK3CDO00329 1044 aa31.44■■■□□ 2.62
CCM2-218ENST00000541586 SYKP43405 635 aa31.44■■■□□ 2.62
CCM2-218ENST00000541586 IL17AQ16552 155 aa31.44■■■□□ 2.62
CCM2-218ENST00000541586 USP6NLQ92738 828 aa31.44■■■□□ 2.62
CCM2-218ENST00000541586 FAM13BQ9NYF5 915 aa31.44■■■□□ 2.62
CCM2-218ENST00000541586 LAD1O00515 517 aa31.44■■■□□ 2.62
CCM2-218ENST00000541586 NEMFO60524 1076 aa31.44■■■□□ 2.62
CCM2-218ENST00000541586 TEX2Q8IWB9 1127 aa31.44■■■□□ 2.62
CCM2-218ENST00000541586 SAMD3Q8N6K7 520 aa31.44■■■□□ 2.62
CCM2-218ENST00000541586 FAM133AQ8N9E0 248 aa31.44■■■□□ 2.62
CCM2-218ENST00000541586 KCNH3Q9ULD8 1083 aa31.44■■■□□ 2.62
CCM2-218ENST00000541586 ZNF792Q3KQV3 632 aa31.43■■■□□ 2.62
CCM2-218ENST00000541586 RBM43Q6ZSC3 357 aaKnown RBP31.43■■■□□ 2.62
CCM2-218ENST00000541586 RAET1EQ8TD07 263 aa31.43■■■□□ 2.62
CCM2-218ENST00000541586 RMDN3Q96TC7 470 aa31.43■■■□□ 2.62
CCM2-218ENST00000541586 SPDYE3A6NKU9 549 aa31.42■■■□□ 2.62
CCM2-218ENST00000541586 FOSP01100 380 aaPredicted RBP31.42■■■□□ 2.62
CCM2-218ENST00000541586 USP49Q70CQ1 688 aa31.42■■■□□ 2.62
CCM2-218ENST00000541586 SOWAHBA6NEL2 793 aa31.41■■■□□ 2.62
CCM2-218ENST00000541586 TDP2O95551 362 aa31.41■■■□□ 2.62
CCM2-218ENST00000541586 UBXN2AP68543 259 aa31.41■■■□□ 2.62
CCM2-218ENST00000541586 GHRHRQ02643 423 aa31.41■■■□□ 2.62
CCM2-218ENST00000541586 ARHGEF16Q5VV41 709 aa31.41■■■□□ 2.62
CCM2-218ENST00000541586 CKAP2LQ8IYA6 745 aa31.41■■■□□ 2.62
CCM2-218ENST00000541586 MYH7BA7E2Y1 1941 aa31.41■■■□□ 2.62
CCM2-218ENST00000541586 CTAGE5O15320 804 aa31.41■■■□□ 2.62
CCM2-218ENST00000541586 PRPHP41219 470 aa31.41■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms