RNA–Protein interactions for RNA: ENST00000541366.1

COPA-205, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-205ENST00000541366 DCAF4Q8WV16 495 aa13.93□□□□□ -0.18
COPA-205ENST00000541366 CRBNQ96SW2 442 aa13.93□□□□□ -0.18
COPA-205ENST00000541366 LOC102724159A0A0B4J2E5 919 aa13.92□□□□□ -0.18
COPA-205ENST00000541366 MMP3P08254 477 aa13.92□□□□□ -0.18
COPA-205ENST00000541366 ALADP13716 330 aa13.92□□□□□ -0.18
COPA-205ENST00000541366 ZNF200P98182 395 aaPredicted RBP13.92□□□□□ -0.18
COPA-205ENST00000541366 PWP2Q15269 919 aaKnown RBP13.92□□□□□ -0.18
COPA-205ENST00000541366 CCDC62Q6P9F0 684 aa13.92□□□□□ -0.18
COPA-205ENST00000541366 NEK9Q8TD19 979 aa13.92□□□□□ -0.18
COPA-205ENST00000541366 PHOX2BQ99453 314 aa13.92□□□□□ -0.18
COPA-205ENST00000541366 HDAC6Q9UBN7 1215 aa13.92□□□□□ -0.18
COPA-205ENST00000541366 ABHD14A-ACY1A0A1B0GW23 586 aa13.91□□□□□ -0.18
COPA-205ENST00000541366 POTEB3A0JP26 581 aa13.91□□□□□ -0.18
COPA-205ENST00000541366 DCXO43602 365 aa13.91□□□□□ -0.18
COPA-205ENST00000541366 NOVP48745 357 aa13.91□□□□□ -0.18
COPA-205ENST00000541366 ARHGAP1Q07960 439 aa13.91□□□□□ -0.18
COPA-205ENST00000541366 RBL2Q08999 1139 aa13.91□□□□□ -0.18
COPA-205ENST00000541366 IKBKEQ14164 716 aa13.91□□□□□ -0.18
COPA-205ENST00000541366 HIC1Q14526 733 aa13.91□□□□□ -0.18
COPA-205ENST00000541366 TRIM71Q2Q1W2 868 aaKnown RBP13.91□□□□□ -0.18
COPA-205ENST00000541366 ZMYM1Q5SVZ6 1142 aa13.91□□□□□ -0.18
COPA-205ENST00000541366 ZNF618Q5T7W0 954 aa13.91□□□□□ -0.18
COPA-205ENST00000541366 POTEBQ6S5H4 581 aa13.91□□□□□ -0.18
COPA-205ENST00000541366 EP400NLQ6ZTU2 488 aa13.91□□□□□ -0.18
COPA-205ENST00000541366 SEPT14Q6ZU15 432 aa13.91□□□□□ -0.18
COPA-205ENST00000541366 SESTD1Q86VW0 696 aa13.91□□□□□ -0.18
COPA-205ENST00000541366 TBC1D5Q92609 795 aa13.91□□□□□ -0.18
COPA-205ENST00000541366 TMEM47Q9BQJ4 181 aa13.91□□□□□ -0.18
COPA-205ENST00000541366 ALG1Q9BT22 464 aa13.91□□□□□ -0.18
COPA-205ENST00000541366 GTF2IRD1Q9UHL9 959 aa13.91□□□□□ -0.18
COPA-205ENST00000541366 MICAL3Q7RTP6 2002 aa13.9□□□□□ -0.18
COPA-205ENST00000541366 MS4A1P11836 297 aa13.9□□□□□ -0.18
COPA-205ENST00000541366 ZP2Q05996 745 aa13.9□□□□□ -0.18
COPA-205ENST00000541366 USH1GQ495M9 461 aa13.9□□□□□ -0.18
COPA-205ENST00000541366 TCEAL5Q5H9L2 206 aa13.9□□□□□ -0.18
COPA-205ENST00000541366 PPP4R3BQ5MIZ7 849 aa13.9□□□□□ -0.18
COPA-205ENST00000541366 VPS53Q5VIR6 699 aa13.9□□□□□ -0.18
COPA-205ENST00000541366 HFE2Q6ZVN8 426 aa13.9□□□□□ -0.18
COPA-205ENST00000541366 DNERQ8NFT8 737 aa13.9□□□□□ -0.18
COPA-205ENST00000541366 MRPL38Q96DV4 380 aaKnown RBP13.9□□□□□ -0.18
COPA-205ENST00000541366 CPVLQ9H3G5 476 aa13.9□□□□□ -0.18
COPA-205ENST00000541366 GH1P01241 217 aa13.89□□□□□ -0.19
COPA-205ENST00000541366 ZNF286BP0CG31 522 aa13.89□□□□□ -0.19
COPA-205ENST00000541366 PSEN2P49810 448 aa13.89□□□□□ -0.19
COPA-205ENST00000541366 EPC2Q52LR7 807 aa13.89□□□□□ -0.19
COPA-205ENST00000541366 C20orf194Q5TEA3 1177 aa13.89□□□□□ -0.19
COPA-205ENST00000541366 MYOCDQ8IZQ8 938 aa13.89□□□□□ -0.19
COPA-205ENST00000541366 C7orf31Q8N865 590 aa13.89□□□□□ -0.19
COPA-205ENST00000541366 DBF4BQ8NFT6 615 aa13.89□□□□□ -0.19
COPA-205ENST00000541366 OTUD7AQ8TE49 926 aaPredicted RBP13.89□□□□□ -0.19
COPA-205ENST00000541366 GPATCH3Q96I76 525 aa13.89□□□□□ -0.19
COPA-205ENST00000541366 SNX27Q96L92 541 aa13.89□□□□□ -0.19
COPA-205ENST00000541366 TAAR1Q96RJ0 339 aa13.89□□□□□ -0.19
COPA-205ENST00000541366 OSBPL7Q9BZF2 842 aa13.89□□□□□ -0.19
COPA-205ENST00000541366 TOMM22Q9NS69 142 aa13.89□□□□□ -0.19
COPA-205ENST00000541366 COL20A1Q9P218 1284 aa13.89□□□□□ -0.19
COPA-205ENST00000541366 INSL6Q9Y581 213 aa13.89□□□□□ -0.19
COPA-205ENST00000541366 CFAP54Q96N23 3096 aa13.89□□□□□ -0.19
COPA-205ENST00000541366 TECTAO75443 2155 aa13.88□□□□□ -0.19
COPA-205ENST00000541366 SORBS3O60504 671 aa13.88□□□□□ -0.19
COPA-205ENST00000541366 LGR5O75473 907 aa13.88□□□□□ -0.19
COPA-205ENST00000541366 PDHBP11177 359 aa13.88□□□□□ -0.19
COPA-205ENST00000541366 TOP1P11387 765 aaKnown RBP13.88□□□□□ -0.19
COPA-205ENST00000541366 CASTP20810 708 aaKnown RBP13.88□□□□□ -0.19
COPA-205ENST00000541366 HTRA4P83105 476 aaPredicted RBP13.88□□□□□ -0.19
COPA-205ENST00000541366 RRP12Q5JTH9 1297 aaKnown RBP13.88□□□□□ -0.19
COPA-205ENST00000541366 BANK1Q8NDB2 785 aa13.88□□□□□ -0.19
COPA-205ENST00000541366 MPHOSPH6Q99547 160 aaKnown RBP13.88□□□□□ -0.19
COPA-205ENST00000541366 FSD1Q9BTV5 496 aa13.88□□□□□ -0.19
COPA-205ENST00000541366 MYH7BA7E2Y1 1941 aa13.88□□□□□ -0.19
COPA-205ENST00000541366 C19orf67A6NJJ6 358 aa13.87□□□□□ -0.19
COPA-205ENST00000541366 ORC4O43929 436 aa13.87□□□□□ -0.19
COPA-205ENST00000541366 EFCAB14O75071 495 aa13.87□□□□□ -0.19
COPA-205ENST00000541366 PARNO95453 639 aaKnown RBP13.87□□□□□ -0.19
COPA-205ENST00000541366 GOLGA8HP0CJ92 632 aa13.87□□□□□ -0.19
COPA-205ENST00000541366 IRS1P35568 1242 aa13.87□□□□□ -0.19
COPA-205ENST00000541366 ZNF543Q08ER8 600 aa13.87□□□□□ -0.19
COPA-205ENST00000541366 PTK7Q13308 1070 aa13.87□□□□□ -0.19
COPA-205ENST00000541366 GPM6BQ13491 265 aa13.87□□□□□ -0.19
COPA-205ENST00000541366 MFSD10Q14728 455 aa13.87□□□□□ -0.19
COPA-205ENST00000541366 CLUL1Q15846 466 aa13.87□□□□□ -0.19
COPA-205ENST00000541366 KIAA0753Q2KHM9 967 aa13.87□□□□□ -0.19
COPA-205ENST00000541366 PI4K2BQ8TCG2 481 aa13.87□□□□□ -0.19
COPA-205ENST00000541366 SP7Q8TDD2 431 aaPredicted RBP13.87□□□□□ -0.19
COPA-205ENST00000541366 PABPC5Q96DU9 382 aaKnown RBP13.87□□□□□ -0.19
COPA-205ENST00000541366 CLDND1Q9NY35 253 aa13.87□□□□□ -0.19
COPA-205ENST00000541366 ANAPC4Q9UJX5 808 aa13.87□□□□□ -0.19
COPA-205ENST00000541366 KIAA1217Q5T5P2 1943 aa13.87□□□□□ -0.19
COPA-205ENST00000541366 WDR19Q8NEZ3 1342 aa13.87□□□□□ -0.19
COPA-205ENST00000541366 ATG2AQ2TAZ0 1938 aa13.86□□□□□ -0.19
COPA-205ENST00000541366 H3BNC9 293 aa13.86□□□□□ -0.19
COPA-205ENST00000541366 HAS3O00219 553 aa13.86□□□□□ -0.19
COPA-205ENST00000541366 UPP2O95045 317 aa13.86□□□□□ -0.19
COPA-205ENST00000541366 LTBRP36941 435 aa13.86□□□□□ -0.19
COPA-205ENST00000541366 DLX2Q07687 328 aaPredicted RBP13.86□□□□□ -0.19
COPA-205ENST00000541366 DGKDQ16760 1214 aa13.86□□□□□ -0.19
COPA-205ENST00000541366 PTPROQ16827 1216 aa13.86□□□□□ -0.19
COPA-205ENST00000541366 PUS10Q3MIT2 529 aaKnown RBP13.86□□□□□ -0.19
COPA-205ENST00000541366 SYTL5Q8TDW5 730 aaPredicted RBP13.86□□□□□ -0.19
COPA-205ENST00000541366 UBA5Q9GZZ9 404 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms