RNA–Protein interactions for RNA: ENST00000541242.1

AC005840.4-201, humanhuman

BASIC

Gene AC005840.4, Length 2,494 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005840.4-201ENST00000541242 MTMR8Q96EF0 704 aa16.43■□□□□ 0.22
AC005840.4-201ENST00000541242 CYFIP2Q96F07 1278 aa16.43■□□□□ 0.22
AC005840.4-201ENST00000541242 ATP6V1G3Q96LB4 118 aa16.43■□□□□ 0.22
AC005840.4-201ENST00000541242 NOC4LQ9BVI4 516 aaKnown RBP16.43■□□□□ 0.22
AC005840.4-201ENST00000541242 NACAP1Q9BZK3 213 aa16.43■□□□□ 0.22
AC005840.4-201ENST00000541242 VEZTQ9HBM0 779 aa16.43■□□□□ 0.22
AC005840.4-201ENST00000541242 FAM207AQ9NSI2 230 aaPredicted RBP16.43■□□□□ 0.22
AC005840.4-201ENST00000541242 AFF2P51816 1311 aa16.43■□□□□ 0.22
AC005840.4-201ENST00000541242 FAM107AO95990 144 aa16.43■□□□□ 0.22
AC005840.4-201ENST00000541242 PAX7P23759 505 aa16.43■□□□□ 0.22
AC005840.4-201ENST00000541242 ITGB3BPQ13352 177 aaPredicted RBP16.43■□□□□ 0.22
AC005840.4-201ENST00000541242 SLC10A5Q5PT55 438 aa16.43■□□□□ 0.22
AC005840.4-201ENST00000541242 RPAINQ86UA6 219 aa16.43■□□□□ 0.22
AC005840.4-201ENST00000541242 ENAHQ8N8S7 591 aaPredicted RBP16.43■□□□□ 0.22
AC005840.4-201ENST00000541242 LRRC15Q8TF66 581 aa16.43■□□□□ 0.22
AC005840.4-201ENST00000541242 CASKIN2Q8WXE0 1202 aa16.43■□□□□ 0.22
AC005840.4-201ENST00000541242 OSBPL7Q9BZF2 842 aa16.43■□□□□ 0.22
AC005840.4-201ENST00000541242 PSMA7O14818 248 aa16.42■□□□□ 0.22
AC005840.4-201ENST00000541242 PRPF3O43395 683 aaKnown RBP16.42■□□□□ 0.22
AC005840.4-201ENST00000541242 CDR1P51861 262 aa16.42■□□□□ 0.22
AC005840.4-201ENST00000541242 DYNLL1P63167 89 aaKnown RBP16.42■□□□□ 0.22
AC005840.4-201ENST00000541242 ANKRD40Q6AI12 368 aa16.42■□□□□ 0.22
AC005840.4-201ENST00000541242 IFT20Q8IY31 132 aa16.42■□□□□ 0.22
AC005840.4-201ENST00000541242 TMTC2Q8N394 836 aa16.42■□□□□ 0.22
AC005840.4-201ENST00000541242 NUP58Q9BVL2 599 aa16.42■□□□□ 0.22
AC005840.4-201ENST00000541242 GDF3Q9NR23 364 aa16.42■□□□□ 0.22
AC005840.4-201ENST00000541242 PLAAQ9Y263 795 aa16.42■□□□□ 0.22
AC005840.4-201ENST00000541242 BAZ2AQ9UIF9 1905 aaKnown RBP16.42■□□□□ 0.22
AC005840.4-201ENST00000541242 CYP2D7A0A087X1C5 515 aa16.42■□□□□ 0.22
AC005840.4-201ENST00000541242 AKR1B10O60218 316 aa16.42■□□□□ 0.22
AC005840.4-201ENST00000541242 PRLRP16471 622 aa16.42■□□□□ 0.22
AC005840.4-201ENST00000541242 TMOD1P28289 359 aa16.42■□□□□ 0.22
AC005840.4-201ENST00000541242 RASSF7Q02833 373 aa16.42■□□□□ 0.22
AC005840.4-201ENST00000541242 PPP2R5AQ15172 486 aa16.42■□□□□ 0.22
AC005840.4-201ENST00000541242 WLSQ5T9L3 541 aa16.42■□□□□ 0.22
AC005840.4-201ENST00000541242 CYB5D1Q6P9G0 228 aa16.42■□□□□ 0.22
AC005840.4-201ENST00000541242 CCDC121Q6ZUS5 278 aa16.42■□□□□ 0.22
AC005840.4-201ENST00000541242 DHX37Q8IY37 1157 aaKnown RBP16.42■□□□□ 0.22
AC005840.4-201ENST00000541242 PROCA1Q8NCQ7 364 aaPredicted RBP16.42■□□□□ 0.22
AC005840.4-201ENST00000541242 RUBCNQ92622 972 aa16.42■□□□□ 0.22
AC005840.4-201ENST00000541242 ALS2CR12Q96Q35 445 aa16.42■□□□□ 0.22
AC005840.4-201ENST00000541242 KRT12Q99456 494 aa16.42■□□□□ 0.22
AC005840.4-201ENST00000541242 RIOK1Q9BRS2 568 aaKnown RBP16.42■□□□□ 0.22
AC005840.4-201ENST00000541242 NARFQ9UHQ1 456 aa16.42■□□□□ 0.22
AC005840.4-201ENST00000541242 CACNA1SQ13698 1873 aa16.42■□□□□ 0.22
AC005840.4-201ENST00000541242 MAGEB6P1A0A0J9YX57 407 aa16.41■□□□□ 0.22
AC005840.4-201ENST00000541242 GNPATO15228 680 aa16.41■□□□□ 0.22
AC005840.4-201ENST00000541242 RPS6KA4O75676 772 aa16.41■□□□□ 0.22
AC005840.4-201ENST00000541242 TNFRSF8P28908 595 aa16.41■□□□□ 0.22
AC005840.4-201ENST00000541242 GFPT1Q06210 699 aaPredicted RBP16.41■□□□□ 0.22
AC005840.4-201ENST00000541242 SNCBQ16143 134 aa16.41■□□□□ 0.22
AC005840.4-201ENST00000541242 KLHDC7AQ5VTJ3 777 aa16.41■□□□□ 0.22
AC005840.4-201ENST00000541242 PARP9Q8IXQ6 854 aa16.41■□□□□ 0.22
AC005840.4-201ENST00000541242 FUKQ8N0W3 1084 aa16.41■□□□□ 0.22
AC005840.4-201ENST00000541242 HPS3Q969F9 1004 aa16.41■□□□□ 0.22
AC005840.4-201ENST00000541242 DISC1Q9NRI5 854 aa16.41■□□□□ 0.22
AC005840.4-201ENST00000541242 PACSIN2Q9UNF0 486 aaPredicted RBP16.41■□□□□ 0.22
AC005840.4-201ENST00000541242 NLRP5P59047 1200 aa16.41■□□□□ 0.22
AC005840.4-201ENST00000541242 SLC51AQ86UW1 340 aa16.41■□□□□ 0.22
AC005840.4-201ENST00000541242 RASGRP4Q8TDF6 673 aa16.41■□□□□ 0.22
AC005840.4-201ENST00000541242 TPX2Q9ULW0 747 aaKnown RBP16.41■□□□□ 0.22
AC005840.4-201ENST00000541242 SCN7AQ01118 1682 aa16.41■□□□□ 0.22
AC005840.4-201ENST00000541242 GOLGA6L7A0A1B0GV03 622 aa16.4■□□□□ 0.22
AC005840.4-201ENST00000541242 MAGEA1P43355 309 aa16.4■□□□□ 0.22
AC005840.4-201ENST00000541242 SF3A3Q12874 501 aaKnown RBP eCLIP16.4■□□□□ 0.22
AC005840.4-201ENST00000541242 PAK2Q13177 524 aa16.4■□□□□ 0.22
AC005840.4-201ENST00000541242 SETDB2Q96T68 719 aa16.4■□□□□ 0.22
AC005840.4-201ENST00000541242 SLC24A3Q9HC58 644 aa16.4■□□□□ 0.22
AC005840.4-201ENST00000541242 FTCDO95954 541 aa16.4■□□□□ 0.22
AC005840.4-201ENST00000541242 RPSAP08865 295 aaKnown RBP16.4■□□□□ 0.22
AC005840.4-201ENST00000541242 FCER1AP12319 257 aa16.4■□□□□ 0.22
AC005840.4-201ENST00000541242 RPS8P62241 208 aaKnown RBP16.4■□□□□ 0.22
AC005840.4-201ENST00000541242 CAVIN4Q5BKX8 364 aa16.4■□□□□ 0.22
AC005840.4-201ENST00000541242 RC3H1Q5TC82 1133 aaKnown RBP16.4■□□□□ 0.22
AC005840.4-201ENST00000541242 FBXO33Q7Z6M2 555 aa16.4■□□□□ 0.22
AC005840.4-201ENST00000541242 RETREG2Q8NC44 543 aa16.4■□□□□ 0.22
AC005840.4-201ENST00000541242 GIMAP8Q8ND71 665 aaPredicted RBP16.4■□□□□ 0.22
AC005840.4-201ENST00000541242 TFCP2L1Q9NZI6 479 aa16.4■□□□□ 0.22
AC005840.4-201ENST00000541242 BCCIPQ9P287 314 aaKnown RBP eCLIP16.4■□□□□ 0.22
AC005840.4-201ENST00000541242 PLAGL2Q9UPG8 496 aa16.4■□□□□ 0.22
AC005840.4-201ENST00000541242 BTAF1O14981 1849 aa16.4■□□□□ 0.22
AC005840.4-201ENST00000541242 SLC1A4P43007 532 aa16.39■□□□□ 0.21
AC005840.4-201ENST00000541242 EVX2Q03828 476 aa16.39■□□□□ 0.21
AC005840.4-201ENST00000541242 STK4Q13043 487 aa16.39■□□□□ 0.21
AC005840.4-201ENST00000541242 IFIT1BQ5T764 474 aaKnown RBP16.39■□□□□ 0.21
AC005840.4-201ENST00000541242 NBPF5PQ86XG9 351 aaPredicted RBP16.39■□□□□ 0.21
AC005840.4-201ENST00000541242 SRBD1Q8N5C6 995 aaKnown RBP16.39■□□□□ 0.21
AC005840.4-201ENST00000541242 FAXDC2Q96IV6 333 aa16.39■□□□□ 0.21
AC005840.4-201ENST00000541242 MMRN2Q9H8L6 949 aa16.39■□□□□ 0.21
AC005840.4-201ENST00000541242 MYH1P12882 1939 aa16.39■□□□□ 0.21
AC005840.4-201ENST00000541242 LRRC53A6NM62 1247 aa16.39■□□□□ 0.21
AC005840.4-201ENST00000541242 NEBLO76041 1014 aa16.39■□□□□ 0.21
AC005840.4-201ENST00000541242 PLCB4Q15147 1175 aa16.39■□□□□ 0.21
AC005840.4-201ENST00000541242 CFAP221Q4G0U5 840 aa16.39■□□□□ 0.21
AC005840.4-201ENST00000541242 CCDC178Q5BJE1 867 aa16.39■□□□□ 0.21
AC005840.4-201ENST00000541242 RRAGAQ7L523 313 aa16.39■□□□□ 0.21
AC005840.4-201ENST00000541242 C4orf32Q8N8J7 132 aa16.39■□□□□ 0.21
AC005840.4-201ENST00000541242 RHOBTB3O94955 611 aa16.38■□□□□ 0.21
AC005840.4-201ENST00000541242 GCFC2P16383 781 aaKnown RBP16.38■□□□□ 0.21
AC005840.4-201ENST00000541242 CDK17Q00537 523 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms