RNA–Protein interactions for RNA: ENST00000540738.3

COLCA1-204, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,537 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-204ENST00000540738 HSF2BPO75031 334 aa15.63■□□□□ 0.09
COLCA1-204ENST00000540738 BRD1O95696 1058 aa15.63■□□□□ 0.09
COLCA1-204ENST00000540738 SYCE1Q8N0S2 351 aa15.63■□□□□ 0.09
COLCA1-204ENST00000540738 SHTN1A0MZ66 631 aa15.63■□□□□ 0.09
COLCA1-204ENST00000540738 PIK3CAP42336 1068 aa15.63■□□□□ 0.09
COLCA1-204ENST00000540738 ADCK5Q3MIX3 580 aa15.63■□□□□ 0.09
COLCA1-204ENST00000540738 SLIT1O75093 1534 aa15.63■□□□□ 0.09
COLCA1-204ENST00000540738 PPP6R2O75170 966 aa15.63■□□□□ 0.09
COLCA1-204ENST00000540738 CCDC26Q8TAB7 109 aa15.63■□□□□ 0.09
COLCA1-204ENST00000540738 PGBD1Q96JS3 809 aa15.63■□□□□ 0.09
COLCA1-204ENST00000540738 GCNAQ96QF7 691 aa15.63■□□□□ 0.09
COLCA1-204ENST00000540738 PCDHA6Q9UN73 950 aa15.63■□□□□ 0.09
COLCA1-204ENST00000540738 PCDHA8Q9Y5H6 950 aa15.63■□□□□ 0.09
COLCA1-204ENST00000540738 ORC4O43929 436 aa15.62■□□□□ 0.09
COLCA1-204ENST00000540738 RPN1P04843 607 aaKnown RBP15.62■□□□□ 0.09
COLCA1-204ENST00000540738 LRMPQ12912 555 aa15.62■□□□□ 0.09
COLCA1-204ENST00000540738 CTR9Q6PD62 1173 aa15.62■□□□□ 0.09
COLCA1-204ENST00000540738 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.62■□□□□ 0.09
COLCA1-204ENST00000540738 MICAL1Q8TDZ2 1067 aa15.62■□□□□ 0.09
COLCA1-204ENST00000540738 NSUN4Q96CB9 384 aaKnown RBP15.62■□□□□ 0.09
COLCA1-204ENST00000540738 PLSCR1O15162 318 aa15.62■□□□□ 0.09
COLCA1-204ENST00000540738 OATP04181 439 aa15.62■□□□□ 0.09
COLCA1-204ENST00000540738 MYO1EQ12965 1108 aa15.62■□□□□ 0.09
COLCA1-204ENST00000540738 NFX1Q12986 1120 aaKnown RBP15.62■□□□□ 0.09
COLCA1-204ENST00000540738 TMTC1Q8IUR5 882 aa15.62■□□□□ 0.09
COLCA1-204ENST00000540738 GPR161Q8N6U8 529 aaKnown RBP15.62■□□□□ 0.09
COLCA1-204ENST00000540738 NSUN7Q8NE18 718 aaKnown RBP15.62■□□□□ 0.09
COLCA1-204ENST00000540738 MCPH1Q8NEM0 835 aa15.62■□□□□ 0.09
COLCA1-204ENST00000540738 RGL2O15211 777 aa15.62■□□□□ 0.09
COLCA1-204ENST00000540738 SFNP31947 248 aa15.62■□□□□ 0.09
COLCA1-204ENST00000540738 KRBA2Q6ZNG9 492 aa15.62■□□□□ 0.09
COLCA1-204ENST00000540738 NEK9Q8TD19 979 aa15.62■□□□□ 0.09
COLCA1-204ENST00000540738 KBTBD13C9JR72 458 aa15.62■□□□□ 0.09
COLCA1-204ENST00000540738 SLFN12LQ6IEE8 588 aa15.62■□□□□ 0.09
COLCA1-204ENST00000540738 MAIP1Q8WWC4 291 aa15.62■□□□□ 0.09
COLCA1-204ENST00000540738 PPP1R9BQ96SB3 815 aa15.62■□□□□ 0.09
COLCA1-204ENST00000540738 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.62■□□□□ 0.09
COLCA1-204ENST00000540738 PDE6CP51160 858 aa15.61■□□□□ 0.09
COLCA1-204ENST00000540738 INTS5Q6P9B9 1019 aaKnown RBP15.61■□□□□ 0.09
COLCA1-204ENST00000540738 ZNF365Q70YC5 407 aa15.61■□□□□ 0.09
COLCA1-204ENST00000540738 GJA10Q969M2 543 aa15.61■□□□□ 0.09
COLCA1-204ENST00000540738 TEX13BQ9BXU2 312 aa15.61■□□□□ 0.09
COLCA1-204ENST00000540738 CCL15-CCL14A0A0B4J2E2 113 aa15.61■□□□□ 0.09
COLCA1-204ENST00000540738 GABPAQ06546 454 aa15.61■□□□□ 0.09
COLCA1-204ENST00000540738 SLC39A14Q15043 492 aa15.61■□□□□ 0.09
COLCA1-204ENST00000540738 CCL15Q16663 113 aa15.61■□□□□ 0.09
COLCA1-204ENST00000540738 MTMR6Q9Y217 621 aa15.61■□□□□ 0.09
COLCA1-204ENST00000540738 MTMR2Q13614 643 aa15.61■□□□□ 0.09
COLCA1-204ENST00000540738 USTQ9Y2C2 406 aa15.61■□□□□ 0.09
COLCA1-204ENST00000540738 UBN2Q6ZU65 1347 aa15.61■□□□□ 0.09
COLCA1-204ENST00000540738 PNOCQ13519 176 aa15.61■□□□□ 0.09
COLCA1-204ENST00000540738 HADHQ16836 314 aaKnown RBP15.61■□□□□ 0.09
COLCA1-204ENST00000540738 NT5C1BQ96P26 610 aa15.61■□□□□ 0.09
COLCA1-204ENST00000540738 LSM14BQ9BX40 385 aaKnown RBP15.61■□□□□ 0.09
COLCA1-204ENST00000540738 LZTFL1Q9NQ48 299 aa15.61■□□□□ 0.09
COLCA1-204ENST00000540738 CCDC66A2RUB6 948 aa15.6■□□□□ 0.09
COLCA1-204ENST00000540738 MAGEA1P43355 309 aa15.6■□□□□ 0.09
COLCA1-204ENST00000540738 PHKA2P46019 1235 aa15.6■□□□□ 0.09
COLCA1-204ENST00000540738 ZNF569Q5MCW4 686 aa15.6■□□□□ 0.09
COLCA1-204ENST00000540738 DEFB129Q9H1M3 183 aa15.6■□□□□ 0.09
COLCA1-204ENST00000540738 PARVGQ9HBI0 331 aa15.6■□□□□ 0.09
COLCA1-204ENST00000540738 ZBBXA8MT70 800 aa15.6■□□□□ 0.09
COLCA1-204ENST00000540738 SLC25A27O95847 323 aa15.6■□□□□ 0.09
COLCA1-204ENST00000540738 MARK3P27448 753 aa15.6■□□□□ 0.09
COLCA1-204ENST00000540738 GRM4Q14833 912 aa15.6■□□□□ 0.09
COLCA1-204ENST00000540738 KARSQ15046 597 aaKnown RBP15.6■□□□□ 0.09
COLCA1-204ENST00000540738 SLC44A5Q8NCS7 719 aa15.6■□□□□ 0.09
COLCA1-204ENST00000540738 SLC39A2Q9NP94 309 aa15.6■□□□□ 0.09
COLCA1-204ENST00000540738 TOPORSQ9NS56 1045 aaPredicted RBP15.6■□□□□ 0.09
COLCA1-204ENST00000540738 A0A1W2PQ27 194 aa15.6■□□□□ 0.09
COLCA1-204ENST00000540738 A0A1W2PQ64 194 aa15.6■□□□□ 0.09
COLCA1-204ENST00000540738 A0A1W2PQD8 194 aa15.6■□□□□ 0.09
COLCA1-204ENST00000540738 ZNF233A6NK53 670 aa15.6■□□□□ 0.09
COLCA1-204ENST00000540738 SNAP25P60880 206 aa15.6■□□□□ 0.09
COLCA1-204ENST00000540738 RSRC2Q7L4I2 434 aaKnown RBP15.6■□□□□ 0.09
COLCA1-204ENST00000540738 GOLGA6CA6NDK9 693 aa15.6■□□□□ 0.09
COLCA1-204ENST00000540738 GOLGA6BA6NDN3 693 aa15.6■□□□□ 0.09
COLCA1-204ENST00000540738 GOLGA6DP0CG33 693 aa15.6■□□□□ 0.09
COLCA1-204ENST00000540738 PPM1KQ8N3J5 372 aa15.6■□□□□ 0.09
COLCA1-204ENST00000540738 GSDMBQ8TAX9 411 aa15.6■□□□□ 0.09
COLCA1-204ENST00000540738 ZNF512BQ96KM6 892 aaPredicted RBP15.6■□□□□ 0.09
COLCA1-204ENST00000540738 GOLGA6AQ9NYA3 693 aa15.6■□□□□ 0.09
COLCA1-204ENST00000540738 KIAA1468Q9P260 1216 aa15.6■□□□□ 0.09
COLCA1-204ENST00000540738 K7ERI5 159 aa15.6■□□□□ 0.09
COLCA1-204ENST00000540738 PSMC2P35998 433 aaKnown RBP15.6■□□□□ 0.09
COLCA1-204ENST00000540738 IFRD2Q12894 506 aaPredicted RBP15.6■□□□□ 0.09
COLCA1-204ENST00000540738 C12orf60Q5U649 245 aa15.6■□□□□ 0.09
COLCA1-204ENST00000540738 PPP1R2P3Q6NXS1 205 aa15.6■□□□□ 0.09
COLCA1-204ENST00000540738 SIRT2Q8IXJ6 389 aa15.6■□□□□ 0.09
COLCA1-204ENST00000540738 FAM20AQ96MK3 541 aa15.6■□□□□ 0.09
COLCA1-204ENST00000540738 RIC8AQ9NPQ8 531 aa15.6■□□□□ 0.09
COLCA1-204ENST00000540738 TNS2Q63HR2 1409 aa15.59■□□□□ 0.09
COLCA1-204ENST00000540738 CTNND1O60716 968 aaKnown RBP15.59■□□□□ 0.09
COLCA1-204ENST00000540738 STAM2O75886 525 aa15.59■□□□□ 0.09
COLCA1-204ENST00000540738 EPHX2P34913 555 aa15.59■□□□□ 0.09
COLCA1-204ENST00000540738 GTF2A2P52657 109 aa15.59■□□□□ 0.09
COLCA1-204ENST00000540738 ARL6IP4Q66PJ3 421 aaKnown RBP15.59■□□□□ 0.09
COLCA1-204ENST00000540738 NLRP4Q96MN2 994 aa15.59■□□□□ 0.09
COLCA1-204ENST00000540738 GSDMAQ96QA5 445 aa15.59■□□□□ 0.09
COLCA1-204ENST00000540738 ORC2Q13416 577 aaPredicted RBP15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms