RNA–Protein interactions for RNA: ENST00000540452.1

C2CD3-215, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 430 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-215ENST00000540452 ERCC4Q92889 916 aaPredicted RBP9.31□□□□□ -0.92
C2CD3-215ENST00000540452 LENG9Q96B70 501 aa9.31□□□□□ -0.92
C2CD3-215ENST00000540452 NUP88Q99567 741 aaPredicted RBP9.31□□□□□ -0.92
C2CD3-215ENST00000540452 POLR3CQ9BUI4 534 aaPredicted RBP9.31□□□□□ -0.92
C2CD3-215ENST00000540452 BMP2KQ9NSY1 1161 aaPredicted RBP9.31□□□□□ -0.92
C2CD3-215ENST00000540452 SPTLC3Q9NUV7 552 aa9.31□□□□□ -0.92
C2CD3-215ENST00000540452 EXOC1Q9NV70 894 aa9.31□□□□□ -0.92
C2CD3-215ENST00000540452 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.31□□□□□ -0.92
C2CD3-215ENST00000540452 KCND2Q9NZV8 630 aa9.31□□□□□ -0.92
C2CD3-215ENST00000540452 ADAMTS5Q9UNA0 930 aa9.31□□□□□ -0.92
C2CD3-215ENST00000540452 GJA3Q9Y6H8 435 aa9.31□□□□□ -0.92
C2CD3-215ENST00000540452 A0A0G2JMZ2 1700 aa9.31□□□□□ -0.92
C2CD3-215ENST00000540452 WDR90Q96KV7 1748 aa9.31□□□□□ -0.92
C2CD3-215ENST00000540452 ITIH6Q6UXX5 1313 aa9.31□□□□□ -0.92
C2CD3-215ENST00000540452 RPTORQ8N122 1335 aa9.31□□□□□ -0.92
C2CD3-215ENST00000540452 IGLV3-22A0A075B6J6 115 aa9.3□□□□□ -0.92
C2CD3-215ENST00000540452 A0A1B0GTH6 734 aa9.3□□□□□ -0.92
C2CD3-215ENST00000540452 USP17L15C9J2P7 530 aa9.3□□□□□ -0.92
C2CD3-215ENST00000540452 USP17L13C9JLJ4 530 aa9.3□□□□□ -0.92
C2CD3-215ENST00000540452 USP17L11C9JVI0 530 aa9.3□□□□□ -0.92
C2CD3-215ENST00000540452 USP17L18D6R9N7 530 aa9.3□□□□□ -0.92
C2CD3-215ENST00000540452 USP17L22D6RA61 530 aa9.3□□□□□ -0.92
C2CD3-215ENST00000540452 USP17L17D6RBQ6 530 aa9.3□□□□□ -0.92
C2CD3-215ENST00000540452 USP17L19D6RCP7 530 aa9.3□□□□□ -0.92
C2CD3-215ENST00000540452 USP17L20D6RJB6 530 aa9.3□□□□□ -0.92
C2CD3-215ENST00000540452 MAFGO15525 162 aa9.3□□□□□ -0.92
C2CD3-215ENST00000540452 CCP110O43303 1012 aa9.3□□□□□ -0.92
C2CD3-215ENST00000540452 RAD21O60216 631 aa9.3□□□□□ -0.92
C2CD3-215ENST00000540452 ZBED4O75132 1171 aa9.3□□□□□ -0.92
C2CD3-215ENST00000540452 STAM2O75886 525 aa9.3□□□□□ -0.92
C2CD3-215ENST00000540452 FGFR1OPO95684 399 aaKnown RBP9.3□□□□□ -0.92
C2CD3-215ENST00000540452 SERPINC1P01008 464 aa9.3□□□□□ -0.92
C2CD3-215ENST00000540452 EEF1GP26641 437 aaKnown RBP9.3□□□□□ -0.92
C2CD3-215ENST00000540452 EHHADHQ08426 723 aa9.3□□□□□ -0.92
C2CD3-215ENST00000540452 SPIRE1Q08AE8 756 aa9.3□□□□□ -0.92
C2CD3-215ENST00000540452 USP17L24Q0WX57 530 aa9.3□□□□□ -0.92
C2CD3-215ENST00000540452 PPP2R5CQ13362 524 aa9.3□□□□□ -0.92
C2CD3-215ENST00000540452 TRIM14Q14142 442 aa9.3□□□□□ -0.92
C2CD3-215ENST00000540452 FILIP1LQ4L180 1135 aa9.3□□□□□ -0.92
C2CD3-215ENST00000540452 KIAA1755Q5JYT7 1200 aa9.3□□□□□ -0.92
C2CD3-215ENST00000540452 USP17L6PQ6QN14 398 aa9.3□□□□□ -0.92
C2CD3-215ENST00000540452 USP50Q70EL3 339 aaPredicted RBP9.3□□□□□ -0.92
C2CD3-215ENST00000540452 MIGA2Q7L4E1 593 aa9.3□□□□□ -0.92
C2CD3-215ENST00000540452 SAMD7Q7Z3H4 446 aa9.3□□□□□ -0.92
C2CD3-215ENST00000540452 FAM114A1Q8IWE2 563 aa9.3□□□□□ -0.92
C2CD3-215ENST00000540452 LRRC8AQ8IWT6 810 aa9.3□□□□□ -0.92
C2CD3-215ENST00000540452 SPICE1Q8N0Z3 855 aa9.3□□□□□ -0.92
C2CD3-215ENST00000540452 GUF1Q8N442 669 aaKnown RBP9.3□□□□□ -0.92
C2CD3-215ENST00000540452 KIFC2Q96AC6 838 aa9.3□□□□□ -0.92
C2CD3-215ENST00000540452 KLRG1Q96E93 195 aa9.3□□□□□ -0.92
C2CD3-215ENST00000540452 RIT2Q99578 217 aa9.3□□□□□ -0.92
C2CD3-215ENST00000540452 THAP9Q9H5L6 903 aa9.3□□□□□ -0.92
C2CD3-215ENST00000540452 TUFT1Q9NNX1 390 aa9.3□□□□□ -0.92
C2CD3-215ENST00000540452 BLOC1S4Q9NUP1 217 aa9.3□□□□□ -0.92
C2CD3-215ENST00000540452 FANCLQ9NW38 375 aa9.3□□□□□ -0.92
C2CD3-215ENST00000540452 IFNKQ9P0W0 207 aa9.3□□□□□ -0.92
C2CD3-215ENST00000540452 ZNF536O15090 1300 aa9.3□□□□□ -0.92
C2CD3-215ENST00000540452 EGFRP00533 1210 aa9.29□□□□□ -0.92
C2CD3-215ENST00000540452 SLURP2P0DP57 97 aa9.29□□□□□ -0.92
C2CD3-215ENST00000540452 VCAM1P19320 739 aa9.29□□□□□ -0.92
C2CD3-215ENST00000540452 LRRC63Q05C16 580 aa9.29□□□□□ -0.92
C2CD3-215ENST00000540452 TPD52L1Q16890 204 aaPredicted RBP9.29□□□□□ -0.92
C2CD3-215ENST00000540452 USH1GQ495M9 461 aa9.29□□□□□ -0.92
C2CD3-215ENST00000540452 KMT5BQ4FZB7 885 aa9.29□□□□□ -0.92
C2CD3-215ENST00000540452 CEP55Q53EZ4 464 aa9.29□□□□□ -0.92
C2CD3-215ENST00000540452 NBPF12Q5TAG4 269 aaPredicted RBP9.29□□□□□ -0.92
C2CD3-215ENST00000540452 ANGEL2Q5VTE6 544 aaKnown RBP9.29□□□□□ -0.92
C2CD3-215ENST00000540452 PCNX4Q63HM2 1172 aa9.29□□□□□ -0.92
C2CD3-215ENST00000540452 DPY19L2Q6NUT2 758 aa9.29□□□□□ -0.92
C2CD3-215ENST00000540452 ARHGAP27Q6ZUM4 889 aa9.29□□□□□ -0.92
C2CD3-215ENST00000540452 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.29□□□□□ -0.92
C2CD3-215ENST00000540452 CCDC186Q7Z3E2 898 aa9.29□□□□□ -0.92
C2CD3-215ENST00000540452 FCHSD1Q86WN1 690 aa9.29□□□□□ -0.92
C2CD3-215ENST00000540452 VSTM4Q8IW00 320 aa9.29□□□□□ -0.92
C2CD3-215ENST00000540452 GRAMD1CQ8IYS0 662 aa9.29□□□□□ -0.92
C2CD3-215ENST00000540452 MB21D1Q8N884 522 aa9.29□□□□□ -0.92
C2CD3-215ENST00000540452 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.29□□□□□ -0.92
C2CD3-215ENST00000540452 WRNIP1Q96S55 665 aa9.29□□□□□ -0.92
C2CD3-215ENST00000540452 XPO4Q9C0E2 1151 aaKnown RBP9.29□□□□□ -0.92
C2CD3-215ENST00000540452 RRAGDQ9NQL2 400 aaPredicted RBP9.29□□□□□ -0.92
C2CD3-215ENST00000540452 GGA3Q9NZ52 723 aa9.29□□□□□ -0.92
C2CD3-215ENST00000540452 LIMA1Q9UHB6 759 aaKnown RBP9.29□□□□□ -0.92
C2CD3-215ENST00000540452 CCPG1Q9ULG6 757 aa9.29□□□□□ -0.92
C2CD3-215ENST00000540452 SSC5DA1L4H1 1573 aa9.29□□□□□ -0.92
C2CD3-215ENST00000540452 OTOFQ9HC10 1997 aa9.28□□□□□ -0.92
C2CD3-215ENST00000540452 SHTN1A0MZ66 631 aa9.28□□□□□ -0.92
C2CD3-215ENST00000540452 FRMD3A2A2Y4 597 aa9.28□□□□□ -0.92
C2CD3-215ENST00000540452 KIF2AO00139 706 aaPredicted RBP9.28□□□□□ -0.92
C2CD3-215ENST00000540452 MEIS1O00470 390 aa9.28□□□□□ -0.92
C2CD3-215ENST00000540452 OFD1O75665 1012 aa9.28□□□□□ -0.92
C2CD3-215ENST00000540452 PSMD10O75832 226 aa9.28□□□□□ -0.92
C2CD3-215ENST00000540452 CDK11BP21127 795 aaKnown RBP9.28□□□□□ -0.92
C2CD3-215ENST00000540452 SFPQP23246 707 aaKnown RBP eCLIP9.28□□□□□ -0.92
C2CD3-215ENST00000540452 CCNE1P24864 410 aa9.28□□□□□ -0.92
C2CD3-215ENST00000540452 COPB2P35606 906 aa9.28□□□□□ -0.92
C2CD3-215ENST00000540452 PRCPP42785 496 aa9.28□□□□□ -0.92
C2CD3-215ENST00000540452 FMR1Q06787 632 aaKnown RBP eCLIP9.28□□□□□ -0.92
C2CD3-215ENST00000540452 NR1I3Q14994 352 aa9.28□□□□□ -0.92
C2CD3-215ENST00000540452 SPECC1LQ69YQ0 1117 aa9.28□□□□□ -0.92
C2CD3-215ENST00000540452 CENPPQ6IPU0 288 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms