RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 EIF4A3P38919 411 aaKnown RBP15.65■□□□□ 0.1
UBE3B-210ENST00000539599 TNNT3P45378 269 aaPredicted RBP15.65■□□□□ 0.1
UBE3B-210ENST00000539599 ZBED6P86452 979 aa15.65■□□□□ 0.1
UBE3B-210ENST00000539599 CRY2Q49AN0 593 aa15.65■□□□□ 0.1
UBE3B-210ENST00000539599 USP40Q9NVE5 1235 aa15.65■□□□□ 0.1
UBE3B-210ENST00000539599 BICDL2A1A5D9 508 aa15.64■□□□□ 0.09
UBE3B-210ENST00000539599 ARID5AQ03989 594 aa15.64■□□□□ 0.09
UBE3B-210ENST00000539599 GFPT1Q06210 699 aaPredicted RBP15.64■□□□□ 0.09
UBE3B-210ENST00000539599 VWA3BQ502W6 1294 aa15.64■□□□□ 0.09
UBE3B-210ENST00000539599 CENPPQ6IPU0 288 aa15.64■□□□□ 0.09
UBE3B-210ENST00000539599 CNNM4Q6P4Q7 775 aa15.64■□□□□ 0.09
UBE3B-210ENST00000539599 RAD54LQ92698 747 aa15.64■□□□□ 0.09
UBE3B-210ENST00000539599 CCDC42Q96M95 316 aa15.64■□□□□ 0.09
UBE3B-210ENST00000539599 ZHX3Q9H4I2 956 aa15.64■□□□□ 0.09
UBE3B-210ENST00000539599 ZNHIT6Q9NWK9 470 aaKnown RBP15.64■□□□□ 0.09
UBE3B-210ENST00000539599 GAKO14976 1311 aa15.64■□□□□ 0.09
UBE3B-210ENST00000539599 BUB1O43683 1085 aa15.64■□□□□ 0.09
UBE3B-210ENST00000539599 MARCH6O60337 910 aa15.64■□□□□ 0.09
UBE3B-210ENST00000539599 PTPROQ16827 1216 aa15.64■□□□□ 0.09
UBE3B-210ENST00000539599 RBM17Q96I25 401 aaKnown RBP15.64■□□□□ 0.09
UBE3B-210ENST00000539599 DDX25Q9UHL0 483 aaKnown RBP15.64■□□□□ 0.09
UBE3B-210ENST00000539599 SIK3Q9Y2K2 1263 aa15.64■□□□□ 0.09
UBE3B-210ENST00000539599 POTEB3A0JP26 581 aa15.64■□□□□ 0.09
UBE3B-210ENST00000539599 POTECB2RU33 542 aa15.64■□□□□ 0.09
UBE3B-210ENST00000539599 SHMT1P34896 483 aa15.64■□□□□ 0.09
UBE3B-210ENST00000539599 CYLC1P35663 651 aaPredicted RBP15.64■□□□□ 0.09
UBE3B-210ENST00000539599 FAM193AP78312 1265 aa15.64■□□□□ 0.09
UBE3B-210ENST00000539599 GABPAQ06546 454 aa15.64■□□□□ 0.09
UBE3B-210ENST00000539599 SKIDA1Q1XH10 827 aa15.64■□□□□ 0.09
UBE3B-210ENST00000539599 NFRKBQ6P4R8 1299 aa15.64■□□□□ 0.09
UBE3B-210ENST00000539599 POTEBQ6S5H4 581 aa15.64■□□□□ 0.09
UBE3B-210ENST00000539599 HDXQ7Z353 690 aa15.64■□□□□ 0.09
UBE3B-210ENST00000539599 CCDC47Q96A33 483 aaKnown RBP15.64■□□□□ 0.09
UBE3B-210ENST00000539599 P2RX7Q99572 595 aaKnown RBP15.64■□□□□ 0.09
UBE3B-210ENST00000539599 SLC7A5Q01650 507 aa15.63■□□□□ 0.09
UBE3B-210ENST00000539599 UNC13DQ70J99 1090 aa15.63■□□□□ 0.09
UBE3B-210ENST00000539599 ATP8B1O43520 1251 aa15.63■□□□□ 0.09
UBE3B-210ENST00000539599 KRT86O43790 486 aa15.63■□□□□ 0.09
UBE3B-210ENST00000539599 MYL1P05976 194 aa15.63■□□□□ 0.09
UBE3B-210ENST00000539599 KIF11P52732 1056 aa15.63■□□□□ 0.09
UBE3B-210ENST00000539599 ZNF543Q08ER8 600 aa15.63■□□□□ 0.09
UBE3B-210ENST00000539599 LRRC55Q6ZSA7 311 aa15.63■□□□□ 0.09
UBE3B-210ENST00000539599 ZSCAN29Q8IWY8 852 aaPredicted RBP15.63■□□□□ 0.09
UBE3B-210ENST00000539599 CUEDC2Q9H467 287 aa15.63■□□□□ 0.09
UBE3B-210ENST00000539599 DBNDD1Q9H9R9 158 aa15.63■□□□□ 0.09
UBE3B-210ENST00000539599 MYO1AQ9UBC5 1043 aa15.63■□□□□ 0.09
UBE3B-210ENST00000539599 ZNF831Q5JPB2 1677 aa15.62■□□□□ 0.09
UBE3B-210ENST00000539599 MEIS1O00470 390 aa15.62■□□□□ 0.09
UBE3B-210ENST00000539599 KRT83P78385 493 aa15.62■□□□□ 0.09
UBE3B-210ENST00000539599 AMPD3Q01432 767 aa15.62■□□□□ 0.09
UBE3B-210ENST00000539599 KRT79Q5XKE5 535 aa15.62■□□□□ 0.09
UBE3B-210ENST00000539599 FOXR1Q6PIV2 292 aa15.62■□□□□ 0.09
UBE3B-210ENST00000539599 IFIH1Q9BYX4 1025 aaKnown RBP15.62■□□□□ 0.09
UBE3B-210ENST00000539599 DEF6Q9H4E7 631 aa15.62■□□□□ 0.09
UBE3B-210ENST00000539599 DNAJC18Q9H819 358 aa15.62■□□□□ 0.09
UBE3B-210ENST00000539599 SERPINB13Q9UIV8 391 aa15.62■□□□□ 0.09
UBE3B-210ENST00000539599 KIAA1024Q9UPX6 916 aa15.62■□□□□ 0.09
UBE3B-210ENST00000539599 MYH7BA7E2Y1 1941 aa15.62■□□□□ 0.09
UBE3B-210ENST00000539599 EIF3CLB5ME19 914 aaKnown RBP15.62■□□□□ 0.09
UBE3B-210ENST00000539599 TOM1O60784 492 aa15.62■□□□□ 0.09
UBE3B-210ENST00000539599 USP14P54578 494 aa15.62■□□□□ 0.09
UBE3B-210ENST00000539599 KCNMA1Q12791 1236 aa15.62■□□□□ 0.09
UBE3B-210ENST00000539599 COASYQ13057 564 aa15.62■□□□□ 0.09
UBE3B-210ENST00000539599 TMEM266Q2M3C6 531 aa15.62■□□□□ 0.09
UBE3B-210ENST00000539599 CDC42EP5Q6NZY7 148 aa15.62■□□□□ 0.09
UBE3B-210ENST00000539599 FNBP4Q8N3X1 1017 aaPredicted RBP15.62■□□□□ 0.09
UBE3B-210ENST00000539599 SECISBP2LQ93073 1101 aaKnown RBP15.62■□□□□ 0.09
UBE3B-210ENST00000539599 ERGIC2Q96RQ1 377 aa15.62■□□□□ 0.09
UBE3B-210ENST00000539599 EIF3CQ99613 913 aaKnown RBP15.62■□□□□ 0.09
UBE3B-210ENST00000539599 PCDHA13Q9Y5I0 950 aa15.62■□□□□ 0.09
UBE3B-210ENST00000539599 IPO7O95373 1038 aaKnown RBP15.61■□□□□ 0.09
UBE3B-210ENST00000539599 RASSF7Q02833 373 aa15.61■□□□□ 0.09
UBE3B-210ENST00000539599 KIF5AQ12840 1032 aa15.61■□□□□ 0.09
UBE3B-210ENST00000539599 PAPD7Q5XG87 772 aaKnown RBP15.61■□□□□ 0.09
UBE3B-210ENST00000539599 HNRNPLLQ8WVV9 542 aaKnown RBP15.61■□□□□ 0.09
UBE3B-210ENST00000539599 DNAJC19Q96DA6 116 aa15.61■□□□□ 0.09
UBE3B-210ENST00000539599 IKZF4Q9H2S9 585 aa15.61■□□□□ 0.09
UBE3B-210ENST00000539599 TRAF5O00463 557 aa15.61■□□□□ 0.09
UBE3B-210ENST00000539599 PPEF1O14829 653 aaPredicted RBP15.61■□□□□ 0.09
UBE3B-210ENST00000539599 AKR1B10O60218 316 aa15.61■□□□□ 0.09
UBE3B-210ENST00000539599 TTLL1O95922 423 aa15.61■□□□□ 0.09
UBE3B-210ENST00000539599 PLCG2P16885 1265 aa15.61■□□□□ 0.09
UBE3B-210ENST00000539599 SLC1A4P43007 532 aa15.61■□□□□ 0.09
UBE3B-210ENST00000539599 FXR2P51116 673 aaKnown RBP eCLIP15.61■□□□□ 0.09
UBE3B-210ENST00000539599 VAV2P52735 878 aa15.61■□□□□ 0.09
UBE3B-210ENST00000539599 C15orf52Q6ZUT6 534 aaKnown RBP15.61■□□□□ 0.09
UBE3B-210ENST00000539599 KIAA0825Q8IV33 1275 aa15.61■□□□□ 0.09
UBE3B-210ENST00000539599 SEPT12Q8IYM1 358 aa15.61■□□□□ 0.09
UBE3B-210ENST00000539599 CERKQ8TCT0 537 aa15.61■□□□□ 0.09
UBE3B-210ENST00000539599 NOC3LQ8WTT2 800 aaKnown RBP15.61■□□□□ 0.09
UBE3B-210ENST00000539599 MS4A14Q96JA4 679 aa15.61■□□□□ 0.09
UBE3B-210ENST00000539599 TRIM34Q9BYJ4 488 aa15.61■□□□□ 0.09
UBE3B-210ENST00000539599 POTEFA5A3E0 1075 aa15.6■□□□□ 0.09
UBE3B-210ENST00000539599 POLRMTO00411 1230 aaKnown RBP15.6■□□□□ 0.09
UBE3B-210ENST00000539599 ERLIN1O75477 346 aa15.6■□□□□ 0.09
UBE3B-210ENST00000539599 TRIM37O94972 964 aa15.6■□□□□ 0.09
UBE3B-210ENST00000539599 POTEIP0CG38 1075 aa15.6■□□□□ 0.09
UBE3B-210ENST00000539599 RNASE9P60153 205 aaKnown RBP15.6■□□□□ 0.09
UBE3B-210ENST00000539599 PSMC6P62333 389 aa15.6■□□□□ 0.09
UBE3B-210ENST00000539599 USH1GQ495M9 461 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms