RNA–Protein interactions for RNA: ENST00000539559.6

TMEM260-203, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 2,680 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-203ENST00000539559 NLRC4Q9NPP4 1024 aa22.5■■□□□ 1.19
TMEM260-203ENST00000539559 ARPP21Q9UBL0 812 aaPredicted RBP22.5■■□□□ 1.19
TMEM260-203ENST00000539559 FAM153AQ9UHL3 310 aa22.5■■□□□ 1.19
TMEM260-203ENST00000539559 TXKP42681 527 aa22.5■■□□□ 1.19
TMEM260-203ENST00000539559 GRM4Q14833 912 aa22.5■■□□□ 1.19
TMEM260-203ENST00000539559 ENOX2Q16206 610 aaKnown RBP22.5■■□□□ 1.19
TMEM260-203ENST00000539559 FAM196AQ6ZSG2 479 aa22.5■■□□□ 1.19
TMEM260-203ENST00000539559 TLR10Q9BXR5 811 aa22.5■■□□□ 1.19
TMEM260-203ENST00000539559 KANSL2Q9H9L4 492 aa22.5■■□□□ 1.19
TMEM260-203ENST00000539559 SH3GLB2Q9NR46 395 aa22.5■■□□□ 1.19
TMEM260-203ENST00000539559 ATP8A2Q9NTI2 1148 aa22.5■■□□□ 1.19
TMEM260-203ENST00000539559 BARHL2Q9NY43 387 aa22.5■■□□□ 1.19
TMEM260-203ENST00000539559 STIM2Q9P246 746 aa22.5■■□□□ 1.19
TMEM260-203ENST00000539559 HYOU1Q9Y4L1 999 aa22.5■■□□□ 1.19
TMEM260-203ENST00000539559 EBAG9O00559 213 aa22.49■■□□□ 1.19
TMEM260-203ENST00000539559 NAPAP54920 295 aa22.49■■□□□ 1.19
TMEM260-203ENST00000539559 TRADDQ15628 312 aa22.49■■□□□ 1.19
TMEM260-203ENST00000539559 IFT81Q8WYA0 676 aa22.49■■□□□ 1.19
TMEM260-203ENST00000539559 CCDC47Q96A33 483 aaKnown RBP22.49■■□□□ 1.19
TMEM260-203ENST00000539559 ZIM3Q96PE6 472 aa22.49■■□□□ 1.19
TMEM260-203ENST00000539559 PACSIN2Q9UNF0 486 aaPredicted RBP22.49■■□□□ 1.19
TMEM260-203ENST00000539559 EIF3HO15372 352 aaKnown RBP eCLIP22.49■■□□□ 1.19
TMEM260-203ENST00000539559 GLI1P08151 1106 aa22.49■■□□□ 1.19
TMEM260-203ENST00000539559 CARSP49589 748 aaKnown RBP22.49■■□□□ 1.19
TMEM260-203ENST00000539559 C8orf74Q6P047 294 aa22.49■■□□□ 1.19
TMEM260-203ENST00000539559 POTEDQ86YR6 584 aa22.49■■□□□ 1.19
TMEM260-203ENST00000539559 C7orf25Q9BPX7 421 aa22.49■■□□□ 1.19
TMEM260-203ENST00000539559 TMEM260Q9NX78 707 aa22.49■■□□□ 1.19
TMEM260-203ENST00000539559 SAP30BPQ9UHR5 308 aaKnown RBP22.49■■□□□ 1.19
TMEM260-203ENST00000539559 TAF1LQ8IZX4 1826 aa22.49■■□□□ 1.19
TMEM260-203ENST00000539559 A0A1W2PQJ5 194 aa22.48■■□□□ 1.19
TMEM260-203ENST00000539559 MYMKA6NI61 221 aa22.48■■□□□ 1.19
TMEM260-203ENST00000539559 MYL1P05976 194 aa22.48■■□□□ 1.19
TMEM260-203ENST00000539559 FBXW10Q5XX13 1052 aa22.48■■□□□ 1.19
TMEM260-203ENST00000539559 FBXO33Q7Z6M2 555 aa22.48■■□□□ 1.19
TMEM260-203ENST00000539559 UIMC1Q96RL1 719 aa22.48■■□□□ 1.19
TMEM260-203ENST00000539559 BIN2Q9UBW5 565 aaPredicted RBP22.48■■□□□ 1.19
TMEM260-203ENST00000539559 NFU1Q9UMS0 254 aa22.48■■□□□ 1.19
TMEM260-203ENST00000539559 A0A087WUV0 522 aaPredicted RBP22.48■■□□□ 1.19
TMEM260-203ENST00000539559 ZEB2O60315 1214 aa22.48■■□□□ 1.19
TMEM260-203ENST00000539559 TSPY3P0CV98 308 aa22.48■■□□□ 1.19
TMEM260-203ENST00000539559 TSPY8P0CW00 308 aa22.48■■□□□ 1.19
TMEM260-203ENST00000539559 GUCY2FP51841 1108 aa22.48■■□□□ 1.19
TMEM260-203ENST00000539559 RPS8P62241 208 aaKnown RBP22.48■■□□□ 1.19
TMEM260-203ENST00000539559 CDK17Q00537 523 aa22.48■■□□□ 1.19
TMEM260-203ENST00000539559 TDRD12Q587J7 1177 aaKnown RBP22.48■■□□□ 1.19
TMEM260-203ENST00000539559 RUFY1Q96T51 708 aa22.48■■□□□ 1.19
TMEM260-203ENST00000539559 SH3GL2Q99962 352 aa22.48■■□□□ 1.19
TMEM260-203ENST00000539559 TANGO6Q9C0B7 1094 aa22.48■■□□□ 1.19
TMEM260-203ENST00000539559 ALS2CR12Q96Q35 445 aa22.47■■□□□ 1.19
TMEM260-203ENST00000539559 LRRC4BQ9NT99 713 aa22.47■■□□□ 1.19
TMEM260-203ENST00000539559 COL24A1Q17RW2 1714 aa22.47■■□□□ 1.19
TMEM260-203ENST00000539559 FTCDO95954 541 aa22.47■■□□□ 1.19
TMEM260-203ENST00000539559 EPHB4P54760 987 aa22.47■■□□□ 1.19
TMEM260-203ENST00000539559 KLHDC7AQ5VTJ3 777 aa22.47■■□□□ 1.19
TMEM260-203ENST00000539559 SH3RF3Q8TEJ3 882 aaPredicted RBP22.47■■□□□ 1.19
TMEM260-203ENST00000539559 TMEM47Q9BQJ4 181 aa22.47■■□□□ 1.19
TMEM260-203ENST00000539559 MYH1P12882 1939 aa22.47■■□□□ 1.19
TMEM260-203ENST00000539559 SMCO2A6NFE2 343 aa22.46■■□□□ 1.19
TMEM260-203ENST00000539559 KLRF2D3W0D1 207 aa22.46■■□□□ 1.19
TMEM260-203ENST00000539559 HIBADHP31937 336 aaKnown RBP22.46■■□□□ 1.19
TMEM260-203ENST00000539559 DIXDC1Q155Q3 683 aa22.46■■□□□ 1.19
TMEM260-203ENST00000539559 FIGNQ5HY92 759 aa22.46■■□□□ 1.19
TMEM260-203ENST00000539559 USP17L2Q6R6M4 530 aa22.46■■□□□ 1.19
TMEM260-203ENST00000539559 DGKHQ86XP1 1220 aa22.46■■□□□ 1.19
TMEM260-203ENST00000539559 DZIP1Q86YF9 867 aaKnown RBP22.46■■□□□ 1.19
TMEM260-203ENST00000539559 CCDC43Q96MW1 224 aaKnown RBP22.46■■□□□ 1.19
TMEM260-203ENST00000539559 HSF2BPO75031 334 aa22.46■■□□□ 1.19
TMEM260-203ENST00000539559 ERLIN2O94905 339 aa22.46■■□□□ 1.19
TMEM260-203ENST00000539559 PAFAH1B1P43034 410 aa22.46■■□□□ 1.19
TMEM260-203ENST00000539559 ARID5AQ03989 594 aa22.46■■□□□ 1.19
TMEM260-203ENST00000539559 PTPROQ16827 1216 aa22.46■■□□□ 1.19
TMEM260-203ENST00000539559 CENPPQ6IPU0 288 aa22.46■■□□□ 1.19
TMEM260-203ENST00000539559 CNNM4Q6P4Q7 775 aa22.46■■□□□ 1.19
TMEM260-203ENST00000539559 TMED8Q6PL24 325 aaPredicted RBP22.46■■□□□ 1.19
TMEM260-203ENST00000539559 TBCKQ8TEA7 893 aa22.46■■□□□ 1.19
TMEM260-203ENST00000539559 BAP1Q92560 729 aa22.46■■□□□ 1.19
TMEM260-203ENST00000539559 NUDT12Q9BQG2 462 aa22.46■■□□□ 1.19
TMEM260-203ENST00000539559 GOLGA8KD6RF30 607 aa22.45■■□□□ 1.19
TMEM260-203ENST00000539559 TCP1P17987 556 aaKnown RBP22.45■■□□□ 1.19
TMEM260-203ENST00000539559 ADRA2BP18089 450 aa22.45■■□□□ 1.19
TMEM260-203ENST00000539559 GUCY2DQ02846 1103 aa22.45■■□□□ 1.19
TMEM260-203ENST00000539559 PDE4CQ08493 712 aa22.45■■□□□ 1.19
TMEM260-203ENST00000539559 GRIK5Q16478 980 aa22.45■■□□□ 1.19
TMEM260-203ENST00000539559 SBK1Q52WX2 424 aa22.45■■□□□ 1.19
TMEM260-203ENST00000539559 C12orf60Q5U649 245 aa22.45■■□□□ 1.19
TMEM260-203ENST00000539559 CACNA2D4Q7Z3S7 1137 aa22.45■■□□□ 1.19
TMEM260-203ENST00000539559 GJA10Q969M2 543 aa22.45■■□□□ 1.19
TMEM260-203ENST00000539559 EPB41L5Q9HCM4 733 aa22.45■■□□□ 1.19
TMEM260-203ENST00000539559 HNRNPH3P31942 346 aaKnown RBP22.45■■□□□ 1.18
TMEM260-203ENST00000539559 PRPHP41219 470 aa22.45■■□□□ 1.18
TMEM260-203ENST00000539559 GRB10Q13322 594 aa22.45■■□□□ 1.18
TMEM260-203ENST00000539559 NONOQ15233 471 aaKnown RBP eCLIP22.45■■□□□ 1.18
TMEM260-203ENST00000539559 PROCA1Q8NCQ7 364 aaPredicted RBP22.45■■□□□ 1.18
TMEM260-203ENST00000539559 BLOC1S4Q9NUP1 217 aa22.45■■□□□ 1.18
TMEM260-203ENST00000539559 SHTN1A0MZ66 631 aa22.44■■□□□ 1.18
TMEM260-203ENST00000539559 POTEMA6NI47 508 aa22.44■■□□□ 1.18
TMEM260-203ENST00000539559 OPA1O60313 960 aa22.44■■□□□ 1.18
TMEM260-203ENST00000539559 GUCY1A3Q02108 690 aa22.44■■□□□ 1.18
TMEM260-203ENST00000539559 NNTQ13423 1086 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms