RNA–Protein interactions for RNA: ENST00000539484.1

CCDC144NL-203, Transcript of coiled-coil domain containing 144 family, N-terminal like, humanhuman

TSL 3

Gene CCDC144NL, Length 751 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NL-203ENST00000539484 TIMP1P01033 207 aa10.69□□□□□ -0.7
CCDC144NL-203ENST00000539484 CST5P28325 142 aaPredicted RBP10.69□□□□□ -0.7
CCDC144NL-203ENST00000539484 SLC1A4P43007 532 aa10.69□□□□□ -0.7
CCDC144NL-203ENST00000539484 FAAP100Q0VG06 881 aa10.69□□□□□ -0.7
CCDC144NL-203ENST00000539484 PPIGQ13427 754 aaKnown RBP eCLIP10.69□□□□□ -0.74e-7■□□□□ 10.6
CCDC144NL-203ENST00000539484 ARID5BQ14865 1188 aa10.69□□□□□ -0.7
CCDC144NL-203ENST00000539484 CCDC144BQ3MJ40 725 aa10.69□□□□□ -0.7
CCDC144NL-203ENST00000539484 GNASQ5JWF2 1037 aa10.69□□□□□ -0.7
CCDC144NL-203ENST00000539484 C20orf194Q5TEA3 1177 aa10.69□□□□□ -0.7
CCDC144NL-203ENST00000539484 CCDC129Q6ZRS4 1044 aa10.69□□□□□ -0.7
CCDC144NL-203ENST00000539484 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.69□□□□□ -0.7
CCDC144NL-203ENST00000539484 ARMCX2Q7L311 632 aa10.69□□□□□ -0.7
CCDC144NL-203ENST00000539484 SVOPQ8N4V2 548 aa10.69□□□□□ -0.7
CCDC144NL-203ENST00000539484 TMEM199Q8N511 208 aa10.69□□□□□ -0.7
CCDC144NL-203ENST00000539484 KLHDC9Q8NEP7 349 aa10.69□□□□□ -0.7
CCDC144NL-203ENST00000539484 NEDD1Q8NHV4 660 aa10.69□□□□□ -0.7
CCDC144NL-203ENST00000539484 COL25A1Q9BXS0 654 aaPredicted RBP10.69□□□□□ -0.7
CCDC144NL-203ENST00000539484 GBF1Q92538 1859 aa10.68□□□□□ -0.7
CCDC144NL-203ENST00000539484 ASB14A6NK59 587 aa10.68□□□□□ -0.7
CCDC144NL-203ENST00000539484 ZEB2O60315 1214 aa10.68□□□□□ -0.7
CCDC144NL-203ENST00000539484 ASGR1P07306 291 aa10.68□□□□□ -0.7
CCDC144NL-203ENST00000539484 ITGB8P26012 769 aa10.68□□□□□ -0.7
CCDC144NL-203ENST00000539484 GJA9P57773 515 aa10.68□□□□□ -0.7
CCDC144NL-203ENST00000539484 TFAP4Q01664 338 aa10.68□□□□□ -0.7
CCDC144NL-203ENST00000539484 PPARAQ07869 468 aa10.68□□□□□ -0.7
CCDC144NL-203ENST00000539484 TKFCQ3LXA3 575 aa10.68□□□□□ -0.7
CCDC144NL-203ENST00000539484 CCDC144CPQ8IYA2 1237 aa10.68□□□□□ -0.7
CCDC144NL-203ENST00000539484 CDK15Q96Q40 435 aa10.68□□□□□ -0.7
CCDC144NL-203ENST00000539484 AP5M1Q9H0R1 490 aa10.68□□□□□ -0.7
CCDC144NL-203ENST00000539484 RNF146Q9NTX7 359 aa10.68□□□□□ -0.7
CCDC144NL-203ENST00000539484 PCDHGC3Q9UN70 934 aa10.68□□□□□ -0.7
CCDC144NL-203ENST00000539484 STX8Q9UNK0 236 aa10.68□□□□□ -0.7
CCDC144NL-203ENST00000539484 PLIN4Q96Q06 1357 aa10.67□□□□□ -0.7
CCDC144NL-203ENST00000539484 MYADML2A6NDP7 307 aa10.67□□□□□ -0.7
CCDC144NL-203ENST00000539484 ARVCFO00192 962 aa10.67□□□□□ -0.7
CCDC144NL-203ENST00000539484 ALAS1P13196 640 aa10.67□□□□□ -0.7
CCDC144NL-203ENST00000539484 TNFAIP2Q03169 654 aa10.67□□□□□ -0.7
CCDC144NL-203ENST00000539484 XP32Q5T750 250 aa10.67□□□□□ -0.7
CCDC144NL-203ENST00000539484 ZNF385CQ66K41 422 aaPredicted RBP10.67□□□□□ -0.7
CCDC144NL-203ENST00000539484 MFSD5Q6N075 450 aa10.67□□□□□ -0.7
CCDC144NL-203ENST00000539484 STAG1Q8WVM7 1258 aa10.67□□□□□ -0.7
CCDC144NL-203ENST00000539484 CHMP4CQ96CF2 233 aa10.67□□□□□ -0.7
CCDC144NL-203ENST00000539484 TRERF1Q96PN7 1200 aa10.67□□□□□ -0.7
CCDC144NL-203ENST00000539484 GAS2L1Q99501 681 aaPredicted RBP10.67□□□□□ -0.7
CCDC144NL-203ENST00000539484 UPF3AQ9H1J1 476 aaKnown RBP10.67□□□□□ -0.7
CCDC144NL-203ENST00000539484 MTIF3Q9H2K0 278 aaKnown RBP10.67□□□□□ -0.7
CCDC144NL-203ENST00000539484 TTYH1Q9H313 450 aaPredicted RBP10.67□□□□□ -0.7
CCDC144NL-203ENST00000539484 MTMR7Q9Y216 660 aa10.67□□□□□ -0.7
CCDC144NL-203ENST00000539484 CABYRO75952 493 aa10.66□□□□□ -0.7
CCDC144NL-203ENST00000539484 MCCP23508 829 aa10.66□□□□□ -0.7
CCDC144NL-203ENST00000539484 EPHB4P54760 987 aa10.66□□□□□ -0.7
CCDC144NL-203ENST00000539484 FOXK2Q01167 660 aa10.66□□□□□ -0.7
CCDC144NL-203ENST00000539484 CNTN2Q02246 1040 aa10.66□□□□□ -0.7
CCDC144NL-203ENST00000539484 CCDC96Q2M329 555 aa10.66□□□□□ -0.7
CCDC144NL-203ENST00000539484 CCSAPQ6IQ19 270 aaPredicted RBP10.66□□□□□ -0.7
CCDC144NL-203ENST00000539484 RCSD1Q6JBY9 416 aa10.66□□□□□ -0.7
CCDC144NL-203ENST00000539484 PSRC1Q6PGN9 363 aaPredicted RBP10.66□□□□□ -0.7
CCDC144NL-203ENST00000539484 TIFAQ96CG3 184 aa10.66□□□□□ -0.7
CCDC144NL-203ENST00000539484 GMCL1Q96IK5 515 aa10.66□□□□□ -0.7
CCDC144NL-203ENST00000539484 SEC62Q99442 399 aaKnown RBP10.66□□□□□ -0.7
CCDC144NL-203ENST00000539484 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.66□□□□□ -0.76e-7■□□□□ 11.1
CCDC144NL-203ENST00000539484 PPP1R12CQ9BZL4 782 aa10.66□□□□□ -0.7
CCDC144NL-203ENST00000539484 ZNF576Q9H609 170 aa10.66□□□□□ -0.7
CCDC144NL-203ENST00000539484 TOMM22Q9NS69 142 aa10.66□□□□□ -0.7
CCDC144NL-203ENST00000539484 DNMT3LQ9UJW3 386 aa10.66□□□□□ -0.7
CCDC144NL-203ENST00000539484 TBX21Q9UL17 535 aa10.66□□□□□ -0.7
CCDC144NL-203ENST00000539484 TRIP12Q14669 1992 aaPredicted RBP10.65□□□□□ -0.7
CCDC144NL-203ENST00000539484 RANBP6O60518 1105 aaKnown RBP10.65□□□□□ -0.7
CCDC144NL-203ENST00000539484 PLA2G6O60733 806 aa10.65□□□□□ -0.7
CCDC144NL-203ENST00000539484 CDK7P50613 346 aa10.65□□□□□ -0.7
CCDC144NL-203ENST00000539484 BEX3Q00994 111 aa10.65□□□□□ -0.7
CCDC144NL-203ENST00000539484 CTDSPL2Q05D32 466 aa10.65□□□□□ -0.7
CCDC144NL-203ENST00000539484 NR5A1Q13285 461 aa10.65□□□□□ -0.7
CCDC144NL-203ENST00000539484 ZMYM1Q5SVZ6 1142 aa10.65□□□□□ -0.7
CCDC144NL-203ENST00000539484 NSMFQ6X4W1 530 aa10.65□□□□□ -0.7
CCDC144NL-203ENST00000539484 KCTD1Q719H9 257 aa10.65□□□□□ -0.7
CCDC144NL-203ENST00000539484 TLK2Q86UE8 772 aa10.65□□□□□ -0.7
CCDC144NL-203ENST00000539484 LINC00528Q8N1L1 170 aa10.65□□□□□ -0.7
CCDC144NL-203ENST00000539484 FAM133AQ8N9E0 248 aa10.65□□□□□ -0.7
CCDC144NL-203ENST00000539484 AGBL1Q96MI9 1066 aa10.65□□□□□ -0.7
CCDC144NL-203ENST00000539484 SEZ6LQ9BYH1 1024 aa10.65□□□□□ -0.7
CCDC144NL-203ENST00000539484 A1CFQ9NQ94 594 aaKnown RBP10.65□□□□□ -0.7
CCDC144NL-203ENST00000539484 MSRAQ9UJ68 235 aa10.65□□□□□ -0.7
CCDC144NL-203ENST00000539484 CCPG1Q9ULG6 757 aa10.65□□□□□ -0.7
CCDC144NL-203ENST00000539484 CUL9Q8IWT3 2517 aa10.64□□□□□ -0.71
CCDC144NL-203ENST00000539484 LCTP09848 1927 aa10.64□□□□□ -0.71
CCDC144NL-203ENST00000539484 LRRC37A2A6NM11 1700 aa10.64□□□□□ -0.71
CCDC144NL-203ENST00000539484 DYNC1LI2O43237 492 aaPredicted RBP10.64□□□□□ -0.71
CCDC144NL-203ENST00000539484 CSF2RAP15509 400 aa10.64□□□□□ -0.71
CCDC144NL-203ENST00000539484 MX1P20591 662 aa10.64□□□□□ -0.71
CCDC144NL-203ENST00000539484 TMEM240Q5SV17 173 aa10.64□□□□□ -0.71
CCDC144NL-203ENST00000539484 IQSEC1Q6DN90 963 aa10.64□□□□□ -0.71
CCDC144NL-203ENST00000539484 KANK3Q6NY19 840 aa10.64□□□□□ -0.71
CCDC144NL-203ENST00000539484 EEPD1Q7L9B9 569 aa10.64□□□□□ -0.71
CCDC144NL-203ENST00000539484 FAM126BQ8IXS8 530 aa10.64□□□□□ -0.71
CCDC144NL-203ENST00000539484 PI4K2BQ8TCG2 481 aa10.64□□□□□ -0.71
CCDC144NL-203ENST00000539484 FGD4Q96M96 766 aa10.64□□□□□ -0.71
CCDC144NL-203ENST00000539484 MPHOSPH6Q99547 160 aaKnown RBP10.64□□□□□ -0.71
CCDC144NL-203ENST00000539484 HIPK3Q9H422 1215 aa10.64□□□□□ -0.71
CCDC144NL-203ENST00000539484 FAM217BQ9NTX9 383 aaPredicted RBP10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms