RNA–Protein interactions for RNA: ENST00000538596.6

CPNE8-203, Transcript of copine 8, humanhuman

TSL 1 (best) BASIC

Gene CPNE8, Length 2,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-203ENST00000538596 C15orf52Q6ZUT6 534 aaKnown RBP13.3□□□□□ -0.28
CPNE8-203ENST00000538596 TBC1D16Q8TBP0 767 aa13.3□□□□□ -0.28
CPNE8-203ENST00000538596 COG1Q8WTW3 980 aa13.3□□□□□ -0.28
CPNE8-203ENST00000538596 RAD54LQ92698 747 aa13.3□□□□□ -0.28
CPNE8-203ENST00000538596 ZFP91Q96JP5 570 aaPredicted RBP13.3□□□□□ -0.28
CPNE8-203ENST00000538596 GBP3Q9H0R5 595 aa13.3□□□□□ -0.28
CPNE8-203ENST00000538596 QTRT2Q9H974 415 aaKnown RBP13.3□□□□□ -0.28
CPNE8-203ENST00000538596 EHD2Q9NZN4 543 aa13.3□□□□□ -0.28
CPNE8-203ENST00000538596 PLAGL2Q9UPG8 496 aa13.3□□□□□ -0.28
CPNE8-203ENST00000538596 PCDHA13Q9Y5I0 950 aa13.3□□□□□ -0.28
CPNE8-203ENST00000538596 FXR2P51116 673 aaKnown RBP eCLIP13.29□□□□□ -0.28
CPNE8-203ENST00000538596 KIF11P52732 1056 aa13.29□□□□□ -0.28
CPNE8-203ENST00000538596 APBA1Q02410 837 aa13.29□□□□□ -0.28
CPNE8-203ENST00000538596 CACNB1Q02641 598 aaPredicted RBP13.29□□□□□ -0.28
CPNE8-203ENST00000538596 SEMA3FQ13275 785 aa13.29□□□□□ -0.28
CPNE8-203ENST00000538596 SPA17Q15506 151 aa13.29□□□□□ -0.28
CPNE8-203ENST00000538596 ZNF662Q6ZS27 426 aa13.29□□□□□ -0.28
CPNE8-203ENST00000538596 EHBP1Q8NDI1 1231 aa13.29□□□□□ -0.28
CPNE8-203ENST00000538596 JMJD4Q9H9V9 463 aa13.29□□□□□ -0.28
CPNE8-203ENST00000538596 SALL4Q9UJQ4 1053 aa13.29□□□□□ -0.28
CPNE8-203ENST00000538596 A0A1W2PQJ5 194 aa13.29□□□□□ -0.28
CPNE8-203ENST00000538596 ESYT2A0FGR8 921 aa13.29□□□□□ -0.28
CPNE8-203ENST00000538596 SSBP05455 408 aaKnown RBP eCLIP13.29□□□□□ -0.28
CPNE8-203ENST00000538596 PLCG2P16885 1265 aa13.29□□□□□ -0.28
CPNE8-203ENST00000538596 ATP2B4P23634 1241 aa13.29□□□□□ -0.28
CPNE8-203ENST00000538596 NOVP48745 357 aa13.29□□□□□ -0.28
CPNE8-203ENST00000538596 TMEM266Q2M3C6 531 aa13.29□□□□□ -0.28
CPNE8-203ENST00000538596 FIGNQ5HY92 759 aa13.29□□□□□ -0.28
CPNE8-203ENST00000538596 LRRC55Q6ZSA7 311 aa13.29□□□□□ -0.28
CPNE8-203ENST00000538596 ADGRF4Q8IZF3 695 aa13.29□□□□□ -0.28
CPNE8-203ENST00000538596 HDAC7Q8WUI4 952 aa13.29□□□□□ -0.28
CPNE8-203ENST00000538596 GAKO14976 1311 aa13.28□□□□□ -0.28
CPNE8-203ENST00000538596 RAD51AP2Q09MP3 1159 aa13.28□□□□□ -0.28
CPNE8-203ENST00000538596 KCTD1Q719H9 257 aa13.28□□□□□ -0.28
CPNE8-203ENST00000538596 HAS1Q92839 578 aa13.28□□□□□ -0.28
CPNE8-203ENST00000538596 TANGO6Q9C0B7 1094 aa13.28□□□□□ -0.28
CPNE8-203ENST00000538596 DEF6Q9H4E7 631 aa13.28□□□□□ -0.28
CPNE8-203ENST00000538596 TAF1LQ8IZX4 1826 aa13.28□□□□□ -0.28
CPNE8-203ENST00000538596 NPHP3-ACAD11A0A0J9YXS1 232 aa13.28□□□□□ -0.28
CPNE8-203ENST00000538596 NCK2O43639 380 aa13.28□□□□□ -0.28
CPNE8-203ENST00000538596 AKR1B10O60218 316 aa13.28□□□□□ -0.28
CPNE8-203ENST00000538596 SMARCA1P28370 1054 aa13.28□□□□□ -0.28
CPNE8-203ENST00000538596 MATR3P43243 847 aaKnown RBP eCLIP13.28□□□□□ -0.28
CPNE8-203ENST00000538596 GFPT1Q06210 699 aaPredicted RBP13.28□□□□□ -0.28
CPNE8-203ENST00000538596 MAN2A1Q16706 1144 aa13.28□□□□□ -0.28
CPNE8-203ENST00000538596 KRT79Q5XKE5 535 aa13.28□□□□□ -0.28
CPNE8-203ENST00000538596 NFRKBQ6P4R8 1299 aa13.28□□□□□ -0.28
CPNE8-203ENST00000538596 CREG2Q8IUH2 290 aa13.28□□□□□ -0.28
CPNE8-203ENST00000538596 GUF1Q8N442 669 aaKnown RBP13.28□□□□□ -0.28
CPNE8-203ENST00000538596 NLRC4Q9NPP4 1024 aa13.28□□□□□ -0.28
CPNE8-203ENST00000538596 STK17AQ9UEE5 414 aa13.28□□□□□ -0.28
CPNE8-203ENST00000538596 THSD7AQ9UPZ6 1657 aa13.27□□□□□ -0.28
CPNE8-203ENST00000538596 PVALEFA0A1B0GWK0 134 aa13.27□□□□□ -0.28
CPNE8-203ENST00000538596 RAD21O60216 631 aa13.27□□□□□ -0.28
CPNE8-203ENST00000538596 SYF2O95926 243 aaKnown RBP13.27□□□□□ -0.28
CPNE8-203ENST00000538596 SERPINB2P05120 415 aa13.27□□□□□ -0.28
CPNE8-203ENST00000538596 CAPN2P17655 700 aa13.27□□□□□ -0.28
CPNE8-203ENST00000538596 CDK17Q00537 523 aa13.27□□□□□ -0.28
CPNE8-203ENST00000538596 SHROOM1Q2M3G4 852 aaPredicted RBP13.27□□□□□ -0.28
CPNE8-203ENST00000538596 CRY2Q49AN0 593 aa13.27□□□□□ -0.28
CPNE8-203ENST00000538596 COBLL1Q53SF7 1204 aa13.27□□□□□ -0.28
CPNE8-203ENST00000538596 HSP90B2PQ58FF3 399 aa13.27□□□□□ -0.28
CPNE8-203ENST00000538596 TMC4Q7Z404 712 aa13.27□□□□□ -0.28
CPNE8-203ENST00000538596 FAM163AQ96GL9 167 aaPredicted RBP13.27□□□□□ -0.28
CPNE8-203ENST00000538596 SH2D4AQ9H788 454 aa13.27□□□□□ -0.28
CPNE8-203ENST00000538596 DDX25Q9UHL0 483 aaKnown RBP13.27□□□□□ -0.28
CPNE8-203ENST00000538596 USP17L10C9JJH3 530 aa13.27□□□□□ -0.29
CPNE8-203ENST00000538596 SCNN1DP51172 638 aa13.27□□□□□ -0.29
CPNE8-203ENST00000538596 GABPAQ06546 454 aa13.27□□□□□ -0.29
CPNE8-203ENST00000538596 KCNMA1Q12791 1236 aa13.27□□□□□ -0.29
CPNE8-203ENST00000538596 FOXR1Q6PIV2 292 aa13.27□□□□□ -0.29
CPNE8-203ENST00000538596 BAP1Q92560 729 aa13.27□□□□□ -0.29
CPNE8-203ENST00000538596 CRACR2AQ9BSW2 395 aa13.27□□□□□ -0.29
CPNE8-203ENST00000538596 HPCAL4Q9UM19 191 aa13.27□□□□□ -0.29
CPNE8-203ENST00000538596 SNX12Q9UMY4 172 aa13.27□□□□□ -0.29
CPNE8-203ENST00000538596 E9PMD0 336 aa13.26□□□□□ -0.29
CPNE8-203ENST00000538596 GYS1P13807 737 aa13.26□□□□□ -0.29
CPNE8-203ENST00000538596 HNRNPH3P31942 346 aaKnown RBP13.26□□□□□ -0.29
CPNE8-203ENST00000538596 PPP1R2P41236 205 aa13.26□□□□□ -0.29
CPNE8-203ENST00000538596 CKAP4Q07065 602 aaKnown RBP13.26□□□□□ -0.29
CPNE8-203ENST00000538596 EHHADHQ08426 723 aa13.26□□□□□ -0.29
CPNE8-203ENST00000538596 COASYQ13057 564 aa13.26□□□□□ -0.29
CPNE8-203ENST00000538596 ASPRV1Q53RT3 343 aa13.26□□□□□ -0.29
CPNE8-203ENST00000538596 NELFCDQ8IXH7 590 aa13.26□□□□□ -0.29
CPNE8-203ENST00000538596 CERS5Q8N5B7 392 aa13.26□□□□□ -0.29
CPNE8-203ENST00000538596 DNAJC19Q96DA6 116 aa13.26□□□□□ -0.29
CPNE8-203ENST00000538596 FAM204AQ9H8W3 233 aa13.26□□□□□ -0.29
CPNE8-203ENST00000538596 PSD3Q9NYI0 1048 aa13.26□□□□□ -0.29
CPNE8-203ENST00000538596 MYH7BA7E2Y1 1941 aa13.26□□□□□ -0.29
CPNE8-203ENST00000538596 ANO9A1A5B4 782 aa13.26□□□□□ -0.29
CPNE8-203ENST00000538596 USP17L15C9J2P7 530 aa13.26□□□□□ -0.29
CPNE8-203ENST00000538596 USP17L13C9JLJ4 530 aa13.26□□□□□ -0.29
CPNE8-203ENST00000538596 USP17L11C9JVI0 530 aa13.26□□□□□ -0.29
CPNE8-203ENST00000538596 USP17L18D6R9N7 530 aa13.26□□□□□ -0.29
CPNE8-203ENST00000538596 USP17L22D6RA61 530 aa13.26□□□□□ -0.29
CPNE8-203ENST00000538596 USP17L17D6RBQ6 530 aa13.26□□□□□ -0.29
CPNE8-203ENST00000538596 USP17L19D6RCP7 530 aa13.26□□□□□ -0.29
CPNE8-203ENST00000538596 USP17L20D6RJB6 530 aa13.26□□□□□ -0.29
CPNE8-203ENST00000538596 MPHOSPH10O00566 681 aaKnown RBP13.26□□□□□ -0.29
CPNE8-203ENST00000538596 BUB1O43683 1085 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms