RNA–Protein interactions for RNA: ENST00000537842.5

TNFRSF1A-210, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 404 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-210ENST00000537842 ZSWIM4Q9H7M6 989 aa3.25□□□□□ -1.89
TNFRSF1A-210ENST00000537842 PHAXQ9H814 394 aaKnown RBP3.25□□□□□ -1.89
TNFRSF1A-210ENST00000537842 PRDM10Q9NQV6 1147 aa3.25□□□□□ -1.89
TNFRSF1A-210ENST00000537842 C1GALT1Q9NS00 363 aa3.25□□□□□ -1.89
TNFRSF1A-210ENST00000537842 PCMTD2Q9NV79 361 aa3.25□□□□□ -1.89
TNFRSF1A-210ENST00000537842 PIM2Q9P1W9 311 aa3.25□□□□□ -1.89
TNFRSF1A-210ENST00000537842 CHPF2Q9P2E5 772 aa3.25□□□□□ -1.89
TNFRSF1A-210ENST00000537842 TJP2Q9UDY2 1190 aa3.25□□□□□ -1.89
TNFRSF1A-210ENST00000537842 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.25□□□□□ -1.89
TNFRSF1A-210ENST00000537842 POLR3KQ9Y2Y1 108 aaPredicted RBP3.25□□□□□ -1.89
TNFRSF1A-210ENST00000537842 TAF1LQ8IZX4 1826 aa3.25□□□□□ -1.89
TNFRSF1A-210ENST00000537842 RGPD3A6NKT7 1758 aaPredicted RBP3.25□□□□□ -1.89
TNFRSF1A-210ENST00000537842 SIPA1L3O60292 1781 aaPredicted RBP3.25□□□□□ -1.89
TNFRSF1A-210ENST00000537842 RGPD4Q7Z3J3 1758 aa3.25□□□□□ -1.89
TNFRSF1A-210ENST00000537842 CARMIL3Q8ND23 1372 aa3.25□□□□□ -1.89
TNFRSF1A-210ENST00000537842 TJP1Q07157 1748 aa3.24□□□□□ -1.89
TNFRSF1A-210ENST00000537842 UBN2Q6ZU65 1347 aa3.24□□□□□ -1.89
TNFRSF1A-210ENST00000537842 MAPK8IP3Q9UPT6 1336 aa3.24□□□□□ -1.89
TNFRSF1A-210ENST00000537842 BRCA2P51587 3418 aa3.24□□□□□ -1.89
TNFRSF1A-210ENST00000537842 FAM221AA4D161 298 aa3.24□□□□□ -1.89
TNFRSF1A-210ENST00000537842 LRIG2O94898 1065 aa3.24□□□□□ -1.89
TNFRSF1A-210ENST00000537842 ATF4P18848 351 aaPredicted RBP3.24□□□□□ -1.89
TNFRSF1A-210ENST00000537842 HSD3B2P26439 372 aa3.24□□□□□ -1.89
TNFRSF1A-210ENST00000537842 HOXA10P31260 410 aaPredicted RBP3.24□□□□□ -1.89
TNFRSF1A-210ENST00000537842 GRIK1P39086 918 aa3.24□□□□□ -1.89
TNFRSF1A-210ENST00000537842 YARSP54577 528 aaKnown RBP3.24□□□□□ -1.89
TNFRSF1A-210ENST00000537842 CYP27A1Q02318 531 aa3.24□□□□□ -1.89
TNFRSF1A-210ENST00000537842 CLCQ05315 142 aa3.24□□□□□ -1.89
TNFRSF1A-210ENST00000537842 CCDC144BQ3MJ40 725 aa3.24□□□□□ -1.89
TNFRSF1A-210ENST00000537842 CYP27C1Q4G0S4 372 aa3.24□□□□□ -1.89
TNFRSF1A-210ENST00000537842 SUSD4Q5VX71 490 aa3.24□□□□□ -1.89
TNFRSF1A-210ENST00000537842 OVOS1Q6IE37 1185 aa3.24□□□□□ -1.89
TNFRSF1A-210ENST00000537842 LETMD1Q6P1Q0 360 aa3.24□□□□□ -1.89
TNFRSF1A-210ENST00000537842 COPS6Q7L5N1 327 aa3.24□□□□□ -1.89
TNFRSF1A-210ENST00000537842 CDH24Q86UP0 819 aa3.24□□□□□ -1.89
TNFRSF1A-210ENST00000537842 CKAP2LQ8IYA6 745 aa3.24□□□□□ -1.89
TNFRSF1A-210ENST00000537842 ZNF34Q8IZ26 560 aa3.24□□□□□ -1.89
TNFRSF1A-210ENST00000537842 TTC5Q8N0Z6 440 aa3.24□□□□□ -1.89
TNFRSF1A-210ENST00000537842 NLGN1Q8N2Q7 840 aa3.24□□□□□ -1.89
TNFRSF1A-210ENST00000537842 FLAD1Q8NFF5 587 aa3.24□□□□□ -1.89
TNFRSF1A-210ENST00000537842 CPLX3Q8WVH0 158 aa3.24□□□□□ -1.89
TNFRSF1A-210ENST00000537842 ACSF2Q96CM8 615 aaPredicted RBP3.24□□□□□ -1.89
TNFRSF1A-210ENST00000537842 EAF1Q96JC9 268 aaPredicted RBP3.24□□□□□ -1.89
TNFRSF1A-210ENST00000537842 METTL22Q9BUU2 404 aaPredicted RBP3.24□□□□□ -1.89
TNFRSF1A-210ENST00000537842 FOXQ1Q9C009 403 aa3.24□□□□□ -1.89
TNFRSF1A-210ENST00000537842 GSX1Q9H4S2 264 aaPredicted RBP3.24□□□□□ -1.89
TNFRSF1A-210ENST00000537842 ANTXR1Q9H6X2 564 aa3.24□□□□□ -1.89
TNFRSF1A-210ENST00000537842 PRDM5Q9NQX1 630 aaPredicted RBP3.24□□□□□ -1.89
TNFRSF1A-210ENST00000537842 IFT57Q9NWB7 429 aa3.24□□□□□ -1.89
TNFRSF1A-210ENST00000537842 BABAM1Q9NWV8 329 aa3.24□□□□□ -1.89
TNFRSF1A-210ENST00000537842 CACNA2D2Q9NY47 1150 aa3.24□□□□□ -1.89
TNFRSF1A-210ENST00000537842 ANGEL1Q9UNK9 670 aaKnown RBP3.24□□□□□ -1.89
TNFRSF1A-210ENST00000537842 EFR3BQ9Y2G0 817 aa3.24□□□□□ -1.89
TNFRSF1A-210ENST00000537842 NOP58Q9Y2X3 529 aaKnown RBP3.24□□□□□ -1.89
TNFRSF1A-210ENST00000537842 DLG5Q8TDM6 1919 aa3.24□□□□□ -1.89
TNFRSF1A-210ENST00000537842 COL15A1P39059 1388 aa3.24□□□□□ -1.89
TNFRSF1A-210ENST00000537842 MKI67P46013 3256 aaKnown RBP3.24□□□□□ -1.89
TNFRSF1A-210ENST00000537842 SYNGAP1Q96PV0 1343 aa3.23□□□□□ -1.89
TNFRSF1A-210ENST00000537842 FANCIQ9NVI1 1328 aa3.23□□□□□ -1.89
TNFRSF1A-210ENST00000537842 UBR2Q8IWV8 1755 aa3.23□□□□□ -1.89
TNFRSF1A-210ENST00000537842 KLRG2A4D1S0 409 aaPredicted RBP3.23□□□□□ -1.89
TNFRSF1A-210ENST00000537842 WTIPA6NIX2 430 aaPredicted RBP3.23□□□□□ -1.89
TNFRSF1A-210ENST00000537842 FAM155AB1AL88 458 aaPredicted RBP3.23□□□□□ -1.89
TNFRSF1A-210ENST00000537842 CHURC1-FNTBB4DL54 471 aa3.23□□□□□ -1.89
TNFRSF1A-210ENST00000537842 CCER2I3L3R5 266 aa3.23□□□□□ -1.89
TNFRSF1A-210ENST00000537842 GFRA2O00451 464 aa3.23□□□□□ -1.89
TNFRSF1A-210ENST00000537842 DNAJA2O60884 412 aa3.23□□□□□ -1.89
TNFRSF1A-210ENST00000537842 SLITRK5O94991 958 aa3.23□□□□□ -1.89
TNFRSF1A-210ENST00000537842 SERPINB2P05120 415 aa3.23□□□□□ -1.89
TNFRSF1A-210ENST00000537842 IGKV5-2P06315 115 aa3.23□□□□□ -1.89
TNFRSF1A-210ENST00000537842 GPTP24298 496 aa3.23□□□□□ -1.89
TNFRSF1A-210ENST00000537842 COL5A3P25940 1745 aaPredicted RBP3.23□□□□□ -1.89
TNFRSF1A-210ENST00000537842 GBP1P32455 592 aa3.23□□□□□ -1.89
TNFRSF1A-210ENST00000537842 NASPP49321 788 aaPredicted RBP3.23□□□□□ -1.89
TNFRSF1A-210ENST00000537842 EXOSC9Q06265 439 aaKnown RBP3.23□□□□□ -1.89
TNFRSF1A-210ENST00000537842 RING1Q06587 406 aa3.23□□□□□ -1.89
TNFRSF1A-210ENST00000537842 SLFN5Q08AF3 891 aa3.23□□□□□ -1.89
TNFRSF1A-210ENST00000537842 AIMP1Q12904 312 aaKnown RBP3.23□□□□□ -1.89
TNFRSF1A-210ENST00000537842 SLBPQ14493 270 aaKnown RBP eCLIP3.23□□□□□ -1.89
TNFRSF1A-210ENST00000537842 COL24A1Q17RW2 1714 aa3.23□□□□□ -1.89
TNFRSF1A-210ENST00000537842 CDKAL1Q5VV42 579 aa3.23□□□□□ -1.89
TNFRSF1A-210ENST00000537842 SCARA3Q6AZY7 606 aa3.23□□□□□ -1.89
TNFRSF1A-210ENST00000537842 PRR5LQ6MZQ0 368 aa3.23□□□□□ -1.89
TNFRSF1A-210ENST00000537842 CCDC84Q86UT8 332 aaPredicted RBP3.23□□□□□ -1.89
TNFRSF1A-210ENST00000537842 WDR63Q8IWG1 891 aa3.23□□□□□ -1.89
TNFRSF1A-210ENST00000537842 PLD6Q8N2A8 252 aaKnown RBP3.23□□□□□ -1.89
TNFRSF1A-210ENST00000537842 FLCNQ8NFG4 579 aa3.23□□□□□ -1.89
TNFRSF1A-210ENST00000537842 MORC4Q8TE76 937 aa3.23□□□□□ -1.89
TNFRSF1A-210ENST00000537842 ANAPC16Q96DE5 110 aa3.23□□□□□ -1.89
TNFRSF1A-210ENST00000537842 SEC16BQ96JE7 1060 aa3.23□□□□□ -1.89
TNFRSF1A-210ENST00000537842 ZNF512BQ96KM6 892 aaPredicted RBP3.23□□□□□ -1.89
TNFRSF1A-210ENST00000537842 KIF2CQ99661 725 aa3.23□□□□□ -1.89
TNFRSF1A-210ENST00000537842 BUD13Q9BRD0 619 aaKnown RBP eCLIP3.23□□□□□ -1.898e-9■■■□□ 16.8
TNFRSF1A-210ENST00000537842 TEX13AQ9BXU3 409 aaPredicted RBP3.23□□□□□ -1.89
TNFRSF1A-210ENST00000537842 PNNQ9H307 717 aaKnown RBP3.23□□□□□ -1.89
TNFRSF1A-210ENST00000537842 DDX21Q9NR30 783 aaKnown RBP eCLIP3.23□□□□□ -1.89
TNFRSF1A-210ENST00000537842 GINM1Q9NU53 330 aa3.23□□□□□ -1.89
TNFRSF1A-210ENST00000537842 BCCIPQ9P287 314 aaKnown RBP eCLIP3.23□□□□□ -1.89
TNFRSF1A-210ENST00000537842 R3HCC1Q9Y3T6 440 aaKnown RBP3.23□□□□□ -1.89
TNFRSF1A-210ENST00000537842 CD2APQ9Y5K6 639 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms