RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 NFIXQ14938 502 aa13.46□□□□□ -0.25
CPSF7-218ENST00000537641 EZH2Q15910 746 aaKnown RBP13.46□□□□□ -0.25
CPSF7-218ENST00000537641 PDXDC1Q6P996 788 aa13.46□□□□□ -0.25
CPSF7-218ENST00000537641 UNC13DQ70J99 1090 aa13.46□□□□□ -0.25
CPSF7-218ENST00000537641 KRT26Q7Z3Y9 468 aa13.46□□□□□ -0.25
CPSF7-218ENST00000537641 TXNRD3Q86VQ6 643 aa13.46□□□□□ -0.25
CPSF7-218ENST00000537641 DZIP1Q86YF9 867 aaKnown RBP13.46□□□□□ -0.25
CPSF7-218ENST00000537641 MICALL1Q8N3F8 863 aa13.46□□□□□ -0.25
CPSF7-218ENST00000537641 CNBD1Q8NA66 436 aa13.46□□□□□ -0.25
CPSF7-218ENST00000537641 KIAA0895Q8NCT3 520 aa13.46□□□□□ -0.25
CPSF7-218ENST00000537641 C1orf131Q8NDD1 294 aaKnown RBP13.46□□□□□ -0.25
CPSF7-218ENST00000537641 WDR66Q8TBY9 1149 aa13.46□□□□□ -0.25
CPSF7-218ENST00000537641 BCAS4Q8TDM0 211 aa13.46□□□□□ -0.25
CPSF7-218ENST00000537641 SMCR8Q8TEV9 937 aaPredicted RBP13.46□□□□□ -0.25
CPSF7-218ENST00000537641 RRP36Q96EU6 259 aaKnown RBP13.46□□□□□ -0.25
CPSF7-218ENST00000537641 CALML4Q96GE6 196 aa13.46□□□□□ -0.25
CPSF7-218ENST00000537641 STK17AQ9UEE5 414 aa13.46□□□□□ -0.25
CPSF7-218ENST00000537641 BAZ2BQ9UIF8 2168 aaKnown RBP13.46□□□□□ -0.26
CPSF7-218ENST00000537641 ATAD5Q96QE3 1844 aa13.46□□□□□ -0.26
CPSF7-218ENST00000537641 PVALEFA0A1B0GWK0 134 aa13.45□□□□□ -0.26
CPSF7-218ENST00000537641 GRID2IPA4D2P6 1211 aa13.45□□□□□ -0.26
CPSF7-218ENST00000537641 ERLIN2O94905 339 aa13.45□□□□□ -0.26
CPSF7-218ENST00000537641 PLEKP08567 350 aaPredicted RBP13.45□□□□□ -0.26
CPSF7-218ENST00000537641 LRRC63Q05C16 580 aa13.45□□□□□ -0.26
CPSF7-218ENST00000537641 NONOQ15233 471 aaKnown RBP eCLIP13.45□□□□□ -0.26
CPSF7-218ENST00000537641 TXNRD1Q16881 649 aa13.45□□□□□ -0.26
CPSF7-218ENST00000537641 NFRKBQ6P4R8 1299 aa13.45□□□□□ -0.26
CPSF7-218ENST00000537641 FAM196AQ6ZSG2 479 aa13.45□□□□□ -0.26
CPSF7-218ENST00000537641 C15orf52Q6ZUT6 534 aaKnown RBP13.45□□□□□ -0.26
CPSF7-218ENST00000537641 B4GALNT4Q76KP1 1039 aa13.45□□□□□ -0.26
CPSF7-218ENST00000537641 CD302Q8IX05 232 aa13.45□□□□□ -0.26
CPSF7-218ENST00000537641 IFT20Q8IY31 132 aa13.45□□□□□ -0.26
CPSF7-218ENST00000537641 GUF1Q8N442 669 aaKnown RBP13.45□□□□□ -0.26
CPSF7-218ENST00000537641 MREGQ8N565 214 aa13.45□□□□□ -0.26
CPSF7-218ENST00000537641 TSEN2Q8NCE0 465 aaKnown RBP13.45□□□□□ -0.26
CPSF7-218ENST00000537641 NOX5Q96PH1 765 aa13.45□□□□□ -0.26
CPSF7-218ENST00000537641 PLIN2Q99541 437 aa13.45□□□□□ -0.26
CPSF7-218ENST00000537641 PAGR1Q9BTK6 254 aa13.45□□□□□ -0.26
CPSF7-218ENST00000537641 NUCKS1Q9H1E3 243 aaKnown RBP13.45□□□□□ -0.26
CPSF7-218ENST00000537641 SEMA6BQ9H3T3 888 aa13.45□□□□□ -0.26
CPSF7-218ENST00000537641 GDF3Q9NR23 364 aa13.45□□□□□ -0.26
CPSF7-218ENST00000537641 ANKIB1Q9P2G1 1089 aa13.45□□□□□ -0.26
CPSF7-218ENST00000537641 RBAK-RBAKDNI3L0D1 243 aa13.44□□□□□ -0.26
CPSF7-218ENST00000537641 ONECUT3O60422 494 aaPredicted RBP13.44□□□□□ -0.26
CPSF7-218ENST00000537641 LDHBP07195 334 aaKnown RBP13.44□□□□□ -0.26
CPSF7-218ENST00000537641 FCER1AP12319 257 aa13.44□□□□□ -0.26
CPSF7-218ENST00000537641 USP8P40818 1118 aa13.44□□□□□ -0.26
CPSF7-218ENST00000537641 TFAP4Q01664 338 aa13.44□□□□□ -0.26
CPSF7-218ENST00000537641 EVX2Q03828 476 aa13.44□□□□□ -0.26
CPSF7-218ENST00000537641 PAK2Q13177 524 aa13.44□□□□□ -0.26
CPSF7-218ENST00000537641 ASTE1Q2TB18 679 aaPredicted RBP13.44□□□□□ -0.26
CPSF7-218ENST00000537641 CFAP221Q4G0U5 840 aa13.44□□□□□ -0.26
CPSF7-218ENST00000537641 TTMPQ5BVD1 217 aa13.44□□□□□ -0.26
CPSF7-218ENST00000537641 EMC10Q5UCC4 262 aa13.44□□□□□ -0.26
CPSF7-218ENST00000537641 KDM7AQ6ZMT4 941 aa13.44□□□□□ -0.26
CPSF7-218ENST00000537641 HEATR3Q7Z4Q2 680 aa13.44□□□□□ -0.26
CPSF7-218ENST00000537641 STAG2Q8N3U4 1231 aa13.44□□□□□ -0.26
CPSF7-218ENST00000537641 HDAC7Q8WUI4 952 aa13.44□□□□□ -0.26
CPSF7-218ENST00000537641 BAP1Q92560 729 aa13.44□□□□□ -0.26
CPSF7-218ENST00000537641 SPZ1Q9BXG8 430 aa13.44□□□□□ -0.26
CPSF7-218ENST00000537641 ZMYND12Q9H0C1 365 aa13.44□□□□□ -0.26
CPSF7-218ENST00000537641 LUC7LQ9NQ29 371 aaKnown RBP13.44□□□□□ -0.26
CPSF7-218ENST00000537641 KIF13BQ9NQT8 1826 aa13.44□□□□□ -0.26
CPSF7-218ENST00000537641 PALM3A6NDB9 673 aaPredicted RBP13.44□□□□□ -0.26
CPSF7-218ENST00000537641 LRRC53A6NM62 1247 aa13.44□□□□□ -0.26
CPSF7-218ENST00000537641 SRRM3A6NNA2 597 aaPredicted RBP13.44□□□□□ -0.26
CPSF7-218ENST00000537641 GSTO1P78417 241 aa13.44□□□□□ -0.26
CPSF7-218ENST00000537641 SWT1Q5T5J6 900 aaKnown RBP13.44□□□□□ -0.26
CPSF7-218ENST00000537641 C12orf60Q5U649 245 aa13.44□□□□□ -0.26
CPSF7-218ENST00000537641 SV2BQ7L1I2 683 aa13.44□□□□□ -0.26
CPSF7-218ENST00000537641 ZNF804AQ7Z570 1209 aa13.44□□□□□ -0.26
CPSF7-218ENST00000537641 CERKQ8TCT0 537 aa13.44□□□□□ -0.26
CPSF7-218ENST00000537641 SYN2Q92777 582 aaPredicted RBP13.44□□□□□ -0.26
CPSF7-218ENST00000537641 TLR10Q9BXR5 811 aa13.44□□□□□ -0.26
CPSF7-218ENST00000537641 LRRC27Q9C0I9 530 aa13.44□□□□□ -0.26
CPSF7-218ENST00000537641 C6orf50Q9HD87 102 aa13.44□□□□□ -0.26
CPSF7-218ENST00000537641 IL17RBQ9NRM6 502 aa13.44□□□□□ -0.26
CPSF7-218ENST00000537641 MYH10P35580 1976 aa13.43□□□□□ -0.26
CPSF7-218ENST00000537641 ANKRD65E5RJM6 399 aa13.43□□□□□ -0.26
CPSF7-218ENST00000537641 GNA11P29992 359 aa13.43□□□□□ -0.26
CPSF7-218ENST00000537641 MEX3CQ5U5Q3 659 aaKnown RBP13.43□□□□□ -0.26
CPSF7-218ENST00000537641 KLHDC7AQ5VTJ3 777 aa13.43□□□□□ -0.26
CPSF7-218ENST00000537641 MCTP2Q6DN12 878 aa13.43□□□□□ -0.26
CPSF7-218ENST00000537641 NEK8Q86SG6 692 aa13.43□□□□□ -0.26
CPSF7-218ENST00000537641 PROM2Q8N271 834 aa13.43□□□□□ -0.26
CPSF7-218ENST00000537641 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.43□□□□□ -0.26
CPSF7-218ENST00000537641 DRC1Q96MC2 740 aa13.43□□□□□ -0.26
CPSF7-218ENST00000537641 ZIM3Q96PE6 472 aa13.43□□□□□ -0.26
CPSF7-218ENST00000537641 CEP89Q96ST8 783 aa13.43□□□□□ -0.26
CPSF7-218ENST00000537641 TSG101Q99816 390 aa13.43□□□□□ -0.26
CPSF7-218ENST00000537641 MMRN2Q9H8L6 949 aa13.43□□□□□ -0.26
CPSF7-218ENST00000537641 RIC8AQ9NPQ8 531 aa13.43□□□□□ -0.26
CPSF7-218ENST00000537641 MCM9Q9NXL9 1143 aa13.43□□□□□ -0.26
CPSF7-218ENST00000537641 EPHB6O15197 1021 aa13.42□□□□□ -0.26
CPSF7-218ENST00000537641 CYTH3O43739 400 aa13.42□□□□□ -0.26
CPSF7-218ENST00000537641 INPP5BP32019 993 aa13.42□□□□□ -0.26
CPSF7-218ENST00000537641 PSMD2Q13200 908 aa13.42□□□□□ -0.26
CPSF7-218ENST00000537641 SLC35G1Q2M3R5 365 aa13.42□□□□□ -0.26
CPSF7-218ENST00000537641 CFAP58Q5T655 872 aa13.42□□□□□ -0.26
CPSF7-218ENST00000537641 PRR5LQ6MZQ0 368 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms