RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 VPS33BQ9H267 617 aa17.48■□□□□ 0.39
MKS1-204ENST00000537529 MYH7BA7E2Y1 1941 aa17.48■□□□□ 0.39
MKS1-204ENST00000537529 SPDYE3A6NKU9 549 aa17.48■□□□□ 0.39
MKS1-204ENST00000537529 KRT9P35527 623 aa17.48■□□□□ 0.39
MKS1-204ENST00000537529 SNAP25P60880 206 aa17.48■□□□□ 0.39
MKS1-204ENST00000537529 USH1GQ495M9 461 aa17.48■□□□□ 0.39
MKS1-204ENST00000537529 SPDYE2Q495Y8 402 aa17.48■□□□□ 0.39
MKS1-204ENST00000537529 CENPPQ6IPU0 288 aa17.48■□□□□ 0.39
MKS1-204ENST00000537529 POTEAQ6S8J7 498 aa17.48■□□□□ 0.39
MKS1-204ENST00000537529 KCNK18Q7Z418 384 aa17.48■□□□□ 0.39
MKS1-204ENST00000537529 GUF1Q8N442 669 aaKnown RBP17.48■□□□□ 0.39
MKS1-204ENST00000537529 GOPCQ9HD26 462 aa17.48■□□□□ 0.39
MKS1-204ENST00000537529 ZNF277Q9NRM2 450 aaPredicted RBP17.48■□□□□ 0.39
MKS1-204ENST00000537529 CGNQ9P2M7 1197 aaKnown RBP17.48■□□□□ 0.39
MKS1-204ENST00000537529 A0A1W2PRG0 241 aa17.47■□□□□ 0.39
MKS1-204ENST00000537529 FGFR1OPO95684 399 aaKnown RBP17.47■□□□□ 0.39
MKS1-204ENST00000537529 IDEP14735 1019 aa17.47■□□□□ 0.39
MKS1-204ENST00000537529 MTIF2P46199 727 aaKnown RBP17.47■□□□□ 0.39
MKS1-204ENST00000537529 TEX2Q8IWB9 1127 aa17.47■□□□□ 0.39
MKS1-204ENST00000537529 CRYGNQ8WXF5 182 aa17.47■□□□□ 0.39
MKS1-204ENST00000537529 HPS3Q969F9 1004 aa17.47■□□□□ 0.39
MKS1-204ENST00000537529 MRPL44Q9H9J2 332 aaKnown RBP17.47■□□□□ 0.39
MKS1-204ENST00000537529 BMP2KQ9NSY1 1161 aaPredicted RBP17.47■□□□□ 0.39
MKS1-204ENST00000537529 B4DLN1 442 aa17.46■□□□□ 0.39
MKS1-204ENST00000537529 TBX3O15119 743 aa17.46■□□□□ 0.39
MKS1-204ENST00000537529 URI1O94763 535 aaPredicted RBP17.46■□□□□ 0.39
MKS1-204ENST00000537529 SREBF1P36956 1147 aa17.46■□□□□ 0.39
MKS1-204ENST00000537529 ECM1Q16610 540 aa17.46■□□□□ 0.39
MKS1-204ENST00000537529 FKBP1CQ5VVH2 108 aa17.46■□□□□ 0.39
MKS1-204ENST00000537529 GJA10Q969M2 543 aa17.46■□□□□ 0.39
MKS1-204ENST00000537529 SEMA6BQ9H3T3 888 aa17.46■□□□□ 0.39
MKS1-204ENST00000537529 RGS17Q9UGC6 210 aaPredicted RBP17.46■□□□□ 0.39
MKS1-204ENST00000537529 CNTNAP1P78357 1384 aa17.46■□□□□ 0.39
MKS1-204ENST00000537529 DPEP1P16444 411 aa17.46■□□□□ 0.39
MKS1-204ENST00000537529 LRRC63Q05C16 580 aa17.46■□□□□ 0.39
MKS1-204ENST00000537529 EHHADHQ08426 723 aa17.46■□□□□ 0.39
MKS1-204ENST00000537529 NAA30Q147X3 362 aaPredicted RBP17.46■□□□□ 0.39
MKS1-204ENST00000537529 Q4G0T1 1027 aa17.46■□□□□ 0.39
MKS1-204ENST00000537529 NIM1KQ8IY84 436 aa17.46■□□□□ 0.39
MKS1-204ENST00000537529 NUP58Q9BVL2 599 aa17.46■□□□□ 0.39
MKS1-204ENST00000537529 PRR12Q9ULL5 1215 aa17.46■□□□□ 0.39
MKS1-204ENST00000537529 LUC7L2Q9Y383 392 aaKnown RBP17.46■□□□□ 0.39
MKS1-204ENST00000537529 BAG6P46379 1132 aa17.45■□□□□ 0.38
MKS1-204ENST00000537529 STAT2P52630 851 aa17.45■□□□□ 0.38
MKS1-204ENST00000537529 ERVK-24P63145 666 aa17.45■□□□□ 0.38
MKS1-204ENST00000537529 SF3B2Q13435 895 aaKnown RBP17.45■□□□□ 0.38
MKS1-204ENST00000537529 TSR1Q2NL82 804 aaKnown RBP17.45■□□□□ 0.38
MKS1-204ENST00000537529 HAUS3Q68CZ6 603 aa17.45■□□□□ 0.38
MKS1-204ENST00000537529 FOXR2Q6PJQ5 311 aa17.45■□□□□ 0.38
MKS1-204ENST00000537529 SPICE1Q8N0Z3 855 aa17.45■□□□□ 0.38
MKS1-204ENST00000537529 RETREG2Q8NC44 543 aa17.45■□□□□ 0.38
MKS1-204ENST00000537529 OR8K1Q8NGG5 319 aa17.45■□□□□ 0.38
MKS1-204ENST00000537529 ERMNQ8TAM6 284 aa17.45■□□□□ 0.38
MKS1-204ENST00000537529 TSG101Q99816 390 aa17.45■□□□□ 0.38
MKS1-204ENST00000537529 NOC4LQ9BVI4 516 aaKnown RBP17.45■□□□□ 0.38
MKS1-204ENST00000537529 PDGFDQ9GZP0 370 aaPredicted RBP17.45■□□□□ 0.38
MKS1-204ENST00000537529 ZBTB21Q9ULJ3 1066 aa17.45■□□□□ 0.38
MKS1-204ENST00000537529 CAPN11Q9UMQ6 739 aa17.45■□□□□ 0.38
MKS1-204ENST00000537529 TMX2Q9Y320 296 aa17.45■□□□□ 0.38
MKS1-204ENST00000537529 STK24Q9Y6E0 443 aa17.45■□□□□ 0.38
MKS1-204ENST00000537529 TTC26A0AVF1 554 aa17.44■□□□□ 0.38
MKS1-204ENST00000537529 RNF225M0QZC1 329 aaPredicted RBP17.44■□□□□ 0.38
MKS1-204ENST00000537529 FANCGO15287 622 aa17.44■□□□□ 0.38
MKS1-204ENST00000537529 TBC1D8BQ0IIM8 1120 aa17.44■□□□□ 0.38
MKS1-204ENST00000537529 PRR16Q569H4 304 aa17.44■□□□□ 0.38
MKS1-204ENST00000537529 FKBP15Q5T1M5 1219 aa17.44■□□□□ 0.38
MKS1-204ENST00000537529 AGBL3Q8NEM8 1001 aa17.44■□□□□ 0.38
MKS1-204ENST00000537529 ETNPPLQ8TBG4 499 aa17.44■□□□□ 0.38
MKS1-204ENST00000537529 WDR24Q96S15 920 aa17.44■□□□□ 0.38
MKS1-204ENST00000537529 DNAJC7Q99615 494 aa17.44■□□□□ 0.38
MKS1-204ENST00000537529 VEZTQ9HBM0 779 aa17.44■□□□□ 0.38
MKS1-204ENST00000537529 ZNRF3Q9ULT6 936 aa17.44■□□□□ 0.38
MKS1-204ENST00000537529 KIAA1024Q9UPX6 916 aa17.44■□□□□ 0.38
MKS1-204ENST00000537529 ABCB11O95342 1321 aa17.44■□□□□ 0.38
MKS1-204ENST00000537529 COL4A5P29400 1685 aa17.44■□□□□ 0.38
MKS1-204ENST00000537529 KIF5CO60282 957 aa17.44■□□□□ 0.38
MKS1-204ENST00000537529 SSBP05455 408 aaKnown RBP eCLIP17.44■□□□□ 0.38
MKS1-204ENST00000537529 COASYQ13057 564 aa17.44■□□□□ 0.38
MKS1-204ENST00000537529 MTMR14Q8NCE2 650 aa17.44■□□□□ 0.38
MKS1-204ENST00000537529 MNS1Q8NEH6 495 aa17.44■□□□□ 0.38
MKS1-204ENST00000537529 SLC16A10Q8TF71 515 aa17.44■□□□□ 0.38
MKS1-204ENST00000537529 KIFC2Q96AC6 838 aa17.44■□□□□ 0.38
MKS1-204ENST00000537529 DNAJC19Q96DA6 116 aa17.44■□□□□ 0.38
MKS1-204ENST00000537529 IQCDQ96DY2 449 aa17.44■□□□□ 0.38
MKS1-204ENST00000537529 CCDC94Q9BW85 323 aaPredicted RBP17.44■□□□□ 0.38
MKS1-204ENST00000537529 PANK4Q9NVE7 773 aa17.44■□□□□ 0.38
MKS1-204ENST00000537529 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.44■□□□□ 0.38
MKS1-204ENST00000537529 V9GYY5 206 aaPredicted RBP17.44■□□□□ 0.38
MKS1-204ENST00000537529 POTEB3A0JP26 581 aa17.43■□□□□ 0.38
MKS1-204ENST00000537529 POTECB2RU33 542 aa17.43■□□□□ 0.38
MKS1-204ENST00000537529 PIK3CDO00329 1044 aa17.43■□□□□ 0.38
MKS1-204ENST00000537529 PLA2G4BP0C869 781 aa17.43■□□□□ 0.38
MKS1-204ENST00000537529 KCNA3P22001 575 aa17.43■□□□□ 0.38
MKS1-204ENST00000537529 ECE1P42892 770 aa17.43■□□□□ 0.38
MKS1-204ENST00000537529 ELF2Q15723 593 aa17.43■□□□□ 0.38
MKS1-204ENST00000537529 POTEBQ6S5H4 581 aa17.43■□□□□ 0.38
MKS1-204ENST00000537529 CCDC65Q8IXS2 484 aa17.43■□□□□ 0.38
MKS1-204ENST00000537529 FAM20AQ96MK3 541 aa17.43■□□□□ 0.38
MKS1-204ENST00000537529 P2RX7Q99572 595 aaKnown RBP17.43■□□□□ 0.38
MKS1-204ENST00000537529 SH2D4AQ9H788 454 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms