RNA–Protein interactions for RNA: ENST00000536823.5

YBX3-206, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 840 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-206ENST00000536823 ZBTB21Q9ULJ3 1066 aa8.48□□□□□ -1.05
YBX3-206ENST00000536823 AGTPBP1Q9UPW5 1226 aa8.48□□□□□ -1.05
YBX3-206ENST00000536823 PTPN22Q9Y2R2 807 aa8.48□□□□□ -1.05
YBX3-206ENST00000536823 MBD4O95243 580 aa8.47□□□□□ -1.05
YBX3-206ENST00000536823 HMGCS2P54868 508 aa8.47□□□□□ -1.05
YBX3-206ENST00000536823 JAG1P78504 1218 aa8.47□□□□□ -1.05
YBX3-206ENST00000536823 SPP2Q13103 211 aa8.47□□□□□ -1.05
YBX3-206ENST00000536823 KIF22Q14807 665 aa8.47□□□□□ -1.05
YBX3-206ENST00000536823 UBE3CQ15386 1083 aa8.47□□□□□ -1.05
YBX3-206ENST00000536823 SHROOM1Q2M3G4 852 aaPredicted RBP8.47□□□□□ -1.05
YBX3-206ENST00000536823 TTC6Q86TZ1 520 aa8.47□□□□□ -1.05
YBX3-206ENST00000536823 FBXO11Q86XK2 927 aa8.47□□□□□ -1.05
YBX3-206ENST00000536823 LCORLQ8N3X6 602 aa8.47□□□□□ -1.05
YBX3-206ENST00000536823 DTWD1Q8N5C7 304 aa8.47□□□□□ -1.05
YBX3-206ENST00000536823 RETREG2Q8NC44 543 aa8.47□□□□□ -1.05
YBX3-206ENST00000536823 TRAIPQ9BWF2 469 aa8.47□□□□□ -1.05
YBX3-206ENST00000536823 ARHGAP39Q9C0H5 1083 aa8.47□□□□□ -1.05
YBX3-206ENST00000536823 VRTNQ9H8Y1 702 aa8.47□□□□□ -1.05
YBX3-206ENST00000536823 AS3MTQ9HBK9 375 aa8.47□□□□□ -1.05
YBX3-206ENST00000536823 SERPINB13Q9UIV8 391 aa8.47□□□□□ -1.05
YBX3-206ENST00000536823 BAZ2AQ9UIF9 1905 aaKnown RBP8.46□□□□□ -1.05
YBX3-206ENST00000536823 RGS9O75916 674 aaPredicted RBP8.46□□□□□ -1.06
YBX3-206ENST00000536823 GH2P01242 217 aa8.46□□□□□ -1.06
YBX3-206ENST00000536823 CYP2C8P10632 490 aa8.46□□□□□ -1.06
YBX3-206ENST00000536823 GABPAQ06546 454 aa8.46□□□□□ -1.06
YBX3-206ENST00000536823 ELOAQ14241 798 aaKnown RBP8.46□□□□□ -1.06
YBX3-206ENST00000536823 TREML2Q5T2D2 321 aa8.46□□□□□ -1.06
YBX3-206ENST00000536823 TSHZ3Q63HK5 1081 aa8.46□□□□□ -1.06
YBX3-206ENST00000536823 ZSCAN25Q6NSZ9 544 aa8.46□□□□□ -1.06
YBX3-206ENST00000536823 TATDN1Q6P1N9 297 aa8.46□□□□□ -1.06
YBX3-206ENST00000536823 ARMC5Q96C12 935 aa8.46□□□□□ -1.06
YBX3-206ENST00000536823 ARMT1Q9H993 441 aa8.46□□□□□ -1.06
YBX3-206ENST00000536823 DCP1AQ9NPI6 582 aaPredicted RBP8.46□□□□□ -1.06
YBX3-206ENST00000536823 PTCH2Q9Y6C5 1203 aa8.46□□□□□ -1.06
YBX3-206ENST00000536823 DOCK3Q8IZD9 2030 aa8.46□□□□□ -1.06
YBX3-206ENST00000536823 RBBP6Q7Z6E9 1792 aaKnown RBP8.45□□□□□ -1.06
YBX3-206ENST00000536823 MGAMO43451 1857 aa8.45□□□□□ -1.06
YBX3-206ENST00000536823 POLR3DP05423 398 aaPredicted RBP8.45□□□□□ -1.06
YBX3-206ENST00000536823 CTGFP29279 349 aa8.45□□□□□ -1.06
YBX3-206ENST00000536823 SHMT1P34896 483 aa8.45□□□□□ -1.06
YBX3-206ENST00000536823 PSMC4P43686 418 aa8.45□□□□□ -1.06
YBX3-206ENST00000536823 PLCD1P51178 756 aa8.45□□□□□ -1.06
YBX3-206ENST00000536823 PRMT2P55345 433 aa8.45□□□□□ -1.06
YBX3-206ENST00000536823 BACE1P56817 501 aa8.45□□□□□ -1.06
YBX3-206ENST00000536823 MLLT1Q03111 559 aaPredicted RBP8.45□□□□□ -1.06
YBX3-206ENST00000536823 PDE4CQ08493 712 aa8.45□□□□□ -1.06
YBX3-206ENST00000536823 PABPC4Q13310 644 aaKnown RBP eCLIP8.45□□□□□ -1.063e-49■■■□□ 17.2
YBX3-206ENST00000536823 HDAC1Q13547 482 aaPredicted RBP8.45□□□□□ -1.06
YBX3-206ENST00000536823 AAMPQ13685 434 aa8.45□□□□□ -1.06
YBX3-206ENST00000536823 NCOA4Q13772 614 aa8.45□□□□□ -1.06
YBX3-206ENST00000536823 KBTBD3Q8NAB2 608 aa8.45□□□□□ -1.06
YBX3-206ENST00000536823 SMCR8Q8TEV9 937 aaPredicted RBP8.45□□□□□ -1.06
YBX3-206ENST00000536823 SDR42E1Q8WUS8 393 aa8.45□□□□□ -1.06
YBX3-206ENST00000536823 HSH2DQ96JZ2 352 aa8.45□□□□□ -1.06
YBX3-206ENST00000536823 ATP8A2Q9NTI2 1148 aa8.45□□□□□ -1.06
YBX3-206ENST00000536823 MCM9Q9NXL9 1143 aa8.45□□□□□ -1.06
YBX3-206ENST00000536823 NAGPAQ9UK23 515 aa8.45□□□□□ -1.06
YBX3-206ENST00000536823 USTQ9Y2C2 406 aa8.45□□□□□ -1.06
YBX3-206ENST00000536823 TTC41PQ6P2S7 1318 aa8.45□□□□□ -1.06
YBX3-206ENST00000536823 C19orf81C9J6K1 198 aa8.44□□□□□ -1.06
YBX3-206ENST00000536823 USP17L10C9JJH3 530 aa8.44□□□□□ -1.06
YBX3-206ENST00000536823 ERC2O15083 957 aa8.44□□□□□ -1.06
YBX3-206ENST00000536823 PRKAB2O43741 272 aa8.44□□□□□ -1.06
YBX3-206ENST00000536823 GLRX3O76003 335 aaKnown RBP8.44□□□□□ -1.06
YBX3-206ENST00000536823 CHGBP05060 677 aa8.44□□□□□ -1.06
YBX3-206ENST00000536823 CYP2D6P10635 497 aa8.44□□□□□ -1.06
YBX3-206ENST00000536823 PDIA4P13667 645 aaKnown RBP8.44□□□□□ -1.06
YBX3-206ENST00000536823 TYRO3Q06418 890 aa8.44□□□□□ -1.06
YBX3-206ENST00000536823 FAM110CQ1W6H9 321 aa8.44□□□□□ -1.06
YBX3-206ENST00000536823 ABCB5Q2M3G0 1257 aa8.44□□□□□ -1.06
YBX3-206ENST00000536823 CERKLQ49MI3 558 aaPredicted RBP8.44□□□□□ -1.06
YBX3-206ENST00000536823 SLC9C1Q4G0N8 1177 aa8.44□□□□□ -1.06
YBX3-206ENST00000536823 PI4K2BQ8TCG2 481 aa8.44□□□□□ -1.06
YBX3-206ENST00000536823 OTUD7AQ8TE49 926 aaPredicted RBP8.44□□□□□ -1.06
YBX3-206ENST00000536823 ZNF333Q96JL9 665 aa8.44□□□□□ -1.06
YBX3-206ENST00000536823 ASCC2Q9H1I8 757 aaPredicted RBP8.44□□□□□ -1.06
YBX3-206ENST00000536823 DNAJB12Q9NXW2 375 aaKnown RBP8.44□□□□□ -1.06
YBX3-206ENST00000536823 TMOD4Q9NZQ9 345 aa8.44□□□□□ -1.06
YBX3-206ENST00000536823 SRRDQ9UH36 339 aa8.44□□□□□ -1.06
YBX3-206ENST00000536823 SALL3Q9BXA9 1300 aa8.44□□□□□ -1.06
YBX3-206ENST00000536823 MYH8P13535 1937 aa8.44□□□□□ -1.06
YBX3-206ENST00000536823 SFI1A8K8P3 1242 aa8.43□□□□□ -1.06
YBX3-206ENST00000536823 KIAA1324LA8MWY0 1029 aaPredicted RBP8.43□□□□□ -1.06
YBX3-206ENST00000536823 ZFYP08048 801 aaPredicted RBP8.43□□□□□ -1.06
YBX3-206ENST00000536823 MX1P20591 662 aa8.43□□□□□ -1.06
YBX3-206ENST00000536823 HOXD10P28358 340 aa8.43□□□□□ -1.06
YBX3-206ENST00000536823 HOXA7P31268 230 aaPredicted RBP8.43□□□□□ -1.06
YBX3-206ENST00000536823 GUCY1A2P33402 732 aa8.43□□□□□ -1.06
YBX3-206ENST00000536823 GCLCP48506 637 aaPredicted RBP8.43□□□□□ -1.06
YBX3-206ENST00000536823 FCGRTP55899 365 aa8.43□□□□□ -1.06
YBX3-206ENST00000536823 IRX3P78415 501 aaPredicted RBP8.43□□□□□ -1.06
YBX3-206ENST00000536823 EML3Q32P44 896 aa8.43□□□□□ -1.06
YBX3-206ENST00000536823 SH3PXD2AQ5TCZ1 1133 aa8.43□□□□□ -1.06
YBX3-206ENST00000536823 IGF2-ASQ6U949 168 aa8.43□□□□□ -1.06
YBX3-206ENST00000536823 SLC9A9Q8IVB4 645 aa8.43□□□□□ -1.06
YBX3-206ENST00000536823 DEPDC4Q8N2C3 294 aa8.43□□□□□ -1.06
YBX3-206ENST00000536823 SLC44A5Q8NCS7 719 aa8.43□□□□□ -1.06
YBX3-206ENST00000536823 APPBP2Q92624 585 aa8.43□□□□□ -1.06
YBX3-206ENST00000536823 OSBP2Q969R2 916 aa8.43□□□□□ -1.06
YBX3-206ENST00000536823 GCC1Q96CN9 775 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms