RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 CASTP20810 708 aaKnown RBP22.9■■□□□ 1.26
TNFRSF1B-204ENST00000536782 CYB5R4Q7L1T6 521 aa22.9■■□□□ 1.26
TNFRSF1B-204ENST00000536782 CHST3Q7LGC8 479 aa22.9■■□□□ 1.26
TNFRSF1B-204ENST00000536782 PPM1EQ8WY54 764 aa22.9■■□□□ 1.26
TNFRSF1B-204ENST00000536782 PXMP2Q9NR77 195 aa22.9■■□□□ 1.26
TNFRSF1B-204ENST00000536782 NR3C2P08235 984 aa22.89■■□□□ 1.25
TNFRSF1B-204ENST00000536782 ADGRE1Q14246 886 aa22.89■■□□□ 1.25
TNFRSF1B-204ENST00000536782 PTGISQ16647 500 aa22.89■■□□□ 1.25
TNFRSF1B-204ENST00000536782 PPP2R2DQ66LE6 453 aa22.89■■□□□ 1.25
TNFRSF1B-204ENST00000536782 RUFY2Q8WXA3 655 aa22.89■■□□□ 1.25
TNFRSF1B-204ENST00000536782 MAP3K20Q9NYL2 800 aaKnown RBP22.89■■□□□ 1.25
TNFRSF1B-204ENST00000536782 MAD2L2Q9UI95 211 aa22.89■■□□□ 1.25
TNFRSF1B-204ENST00000536782 DDX41Q9UJV9 622 aaKnown RBP22.89■■□□□ 1.25
TNFRSF1B-204ENST00000536782 TANC1Q9C0D5 1861 aa22.89■■□□□ 1.25
TNFRSF1B-204ENST00000536782 PRRC2BQ5JSZ5 2229 aaKnown RBP22.88■■□□□ 1.25
TNFRSF1B-204ENST00000536782 ZBTB5O15062 677 aa22.88■■□□□ 1.25
TNFRSF1B-204ENST00000536782 IGFBP4P22692 258 aa22.88■■□□□ 1.25
TNFRSF1B-204ENST00000536782 HSD17B4P51659 736 aa22.88■■□□□ 1.25
TNFRSF1B-204ENST00000536782 GHRHRQ02643 423 aa22.88■■□□□ 1.25
TNFRSF1B-204ENST00000536782 DGKDQ16760 1214 aa22.88■■□□□ 1.25
TNFRSF1B-204ENST00000536782 CCDC155Q8N6L0 562 aa22.88■■□□□ 1.25
TNFRSF1B-204ENST00000536782 MTMR8Q96EF0 704 aa22.88■■□□□ 1.25
TNFRSF1B-204ENST00000536782 SUPT16HQ9Y5B9 1047 aaKnown RBP22.88■■□□□ 1.25
TNFRSF1B-204ENST00000536782 PCDHA1Q9Y5I3 950 aa22.88■■□□□ 1.25
TNFRSF1B-204ENST00000536782 MRVI1Q9Y6F6 885 aa22.88■■□□□ 1.25
TNFRSF1B-204ENST00000536782 U3KPZ7 1027 aaPredicted RBP22.88■■□□□ 1.25
TNFRSF1B-204ENST00000536782 PTPRSQ13332 1948 aa22.88■■□□□ 1.25
TNFRSF1B-204ENST00000536782 PALM3A6NDB9 673 aaPredicted RBP22.87■■□□□ 1.25
TNFRSF1B-204ENST00000536782 OPLAHO14841 1288 aa22.87■■□□□ 1.25
TNFRSF1B-204ENST00000536782 MYOGP15173 224 aa22.87■■□□□ 1.25
TNFRSF1B-204ENST00000536782 TJAP1Q5JTD0 557 aa22.87■■□□□ 1.25
TNFRSF1B-204ENST00000536782 SESTD1Q86VW0 696 aa22.87■■□□□ 1.25
TNFRSF1B-204ENST00000536782 KAT2BQ92831 832 aa22.87■■□□□ 1.25
TNFRSF1B-204ENST00000536782 FTOQ9C0B1 505 aaKnown RBP eCLIP22.87■■□□□ 1.25
TNFRSF1B-204ENST00000536782 ERICH2A1L162 156 aa22.86■■□□□ 1.25
TNFRSF1B-204ENST00000536782 PPP1R11O60927 126 aaPredicted RBP22.86■■□□□ 1.25
TNFRSF1B-204ENST00000536782 CYP21A2P08686 494 aa22.86■■□□□ 1.25
TNFRSF1B-204ENST00000536782 TRAF1Q13077 416 aa22.86■■□□□ 1.25
TNFRSF1B-204ENST00000536782 LAMC2Q13753 1193 aa22.86■■□□□ 1.25
TNFRSF1B-204ENST00000536782 TMEM67Q5HYA8 995 aa22.86■■□□□ 1.25
TNFRSF1B-204ENST00000536782 SAMD3Q8N6K7 520 aa22.86■■□□□ 1.25
TNFRSF1B-204ENST00000536782 CAGE1Q8TC20 777 aa22.86■■□□□ 1.25
TNFRSF1B-204ENST00000536782 EMID1Q96A84 441 aaPredicted RBP22.86■■□□□ 1.25
TNFRSF1B-204ENST00000536782 SLC9A7Q96T83 725 aa22.86■■□□□ 1.25
TNFRSF1B-204ENST00000536782 MYH7BA7E2Y1 1941 aa22.86■■□□□ 1.25
TNFRSF1B-204ENST00000536782 IFIT3O14879 490 aaKnown RBP22.85■■□□□ 1.25
TNFRSF1B-204ENST00000536782 MYCLP12524 364 aaPredicted RBP22.85■■□□□ 1.25
TNFRSF1B-204ENST00000536782 CHMLP26374 656 aa22.85■■□□□ 1.25
TNFRSF1B-204ENST00000536782 PTH1RQ03431 593 aa22.85■■□□□ 1.25
TNFRSF1B-204ENST00000536782 GRM4Q14833 912 aa22.85■■□□□ 1.25
TNFRSF1B-204ENST00000536782 CCDC85BQ15834 202 aaPredicted RBP22.85■■□□□ 1.25
TNFRSF1B-204ENST00000536782 GDF6Q6KF10 455 aaPredicted RBP22.85■■□□□ 1.25
TNFRSF1B-204ENST00000536782 STOX1Q6ZVD7 989 aa22.85■■□□□ 1.25
TNFRSF1B-204ENST00000536782 HOMER1Q86YM7 354 aa22.85■■□□□ 1.25
TNFRSF1B-204ENST00000536782 DHX37Q8IY37 1157 aaKnown RBP22.85■■□□□ 1.25
TNFRSF1B-204ENST00000536782 PHOSPHO2Q8TCD6 241 aa22.85■■□□□ 1.25
TNFRSF1B-204ENST00000536782 AFAP1L1Q8TED9 768 aa22.85■■□□□ 1.25
TNFRSF1B-204ENST00000536782 PDCD2LQ9BRP1 358 aa22.85■■□□□ 1.25
TNFRSF1B-204ENST00000536782 XIRP2A4UGR9 3374 aa22.84■■□□□ 1.25
TNFRSF1B-204ENST00000536782 TCF20Q9UGU0 1960 aaKnown RBP22.84■■□□□ 1.25
TNFRSF1B-204ENST00000536782 HOXA13P31271 388 aaPredicted RBP22.84■■□□□ 1.25
TNFRSF1B-204ENST00000536782 RALYLQ86SE5 291 aaKnown RBP22.84■■□□□ 1.25
TNFRSF1B-204ENST00000536782 C7orf31Q8N865 590 aa22.84■■□□□ 1.25
TNFRSF1B-204ENST00000536782 PPTC7Q8NI37 304 aa22.84■■□□□ 1.25
TNFRSF1B-204ENST00000536782 CTAGE1Q96RT6 745 aa22.84■■□□□ 1.25
TNFRSF1B-204ENST00000536782 PIGSQ96S52 555 aa22.84■■□□□ 1.25
TNFRSF1B-204ENST00000536782 KATNAL1Q9BW62 490 aa22.84■■□□□ 1.25
TNFRSF1B-204ENST00000536782 RIOX1Q9H6W3 641 aa22.84■■□□□ 1.25
TNFRSF1B-204ENST00000536782 SART3Q15020 963 aaKnown RBP22.83■■□□□ 1.25
TNFRSF1B-204ENST00000536782 KCNV1Q6PIU1 500 aa22.83■■□□□ 1.25
TNFRSF1B-204ENST00000536782 NCOA7Q8NI08 942 aa22.83■■□□□ 1.25
TNFRSF1B-204ENST00000536782 ATXN2LQ8WWM7 1075 aaKnown RBP22.83■■□□□ 1.25
TNFRSF1B-204ENST00000536782 THEGQ9P2T0 379 aa22.83■■□□□ 1.25
TNFRSF1B-204ENST00000536782 GTF2IRD1Q9UHL9 959 aa22.83■■□□□ 1.25
TNFRSF1B-204ENST00000536782 GCOM1H8Y6P7 765 aaPredicted RBP22.82■■□□□ 1.24
TNFRSF1B-204ENST00000536782 RGS20O76081 388 aa22.82■■□□□ 1.24
TNFRSF1B-204ENST00000536782 BAIAP3O94812 1187 aa22.82■■□□□ 1.24
TNFRSF1B-204ENST00000536782 CA3P07451 260 aa22.82■■□□□ 1.24
TNFRSF1B-204ENST00000536782 POLR2MP0CAP2 368 aa22.82■■□□□ 1.24
TNFRSF1B-204ENST00000536782 SELPP16109 830 aa22.82■■□□□ 1.24
TNFRSF1B-204ENST00000536782 PSEN2P49810 448 aa22.82■■□□□ 1.24
TNFRSF1B-204ENST00000536782 MFSD10Q14728 455 aa22.82■■□□□ 1.24
TNFRSF1B-204ENST00000536782 WTAPQ15007 396 aa22.82■■□□□ 1.24
TNFRSF1B-204ENST00000536782 PGM5Q15124 567 aa22.82■■□□□ 1.24
TNFRSF1B-204ENST00000536782 VSIG10LQ86VR7 867 aa22.82■■□□□ 1.24
TNFRSF1B-204ENST00000536782 ALG1Q9BT22 464 aa22.82■■□□□ 1.24
TNFRSF1B-204ENST00000536782 HDAC6Q9UBN7 1215 aa22.82■■□□□ 1.24
TNFRSF1B-204ENST00000536782 KIF28PB7ZC32 967 aa22.81■■□□□ 1.24
TNFRSF1B-204ENST00000536782 E7EWF7 191 aa22.81■■□□□ 1.24
TNFRSF1B-204ENST00000536782 F2P00734 622 aa22.81■■□□□ 1.24
TNFRSF1B-204ENST00000536782 ZNF286BP0CG31 522 aa22.81■■□□□ 1.24
TNFRSF1B-204ENST00000536782 KIAA0753Q2KHM9 967 aa22.81■■□□□ 1.24
TNFRSF1B-204ENST00000536782 SLC35G1Q2M3R5 365 aa22.81■■□□□ 1.24
TNFRSF1B-204ENST00000536782 MYSM1Q5VVJ2 828 aa22.81■■□□□ 1.24
TNFRSF1B-204ENST00000536782 LRRC8DQ7L1W4 858 aa22.81■■□□□ 1.24
TNFRSF1B-204ENST00000536782 SENP2Q9HC62 589 aa22.81■■□□□ 1.24
TNFRSF1B-204ENST00000536782 BRWD1Q9NSI6 2320 aa22.81■■□□□ 1.24
TNFRSF1B-204ENST00000536782 BAZ2BQ9UIF8 2168 aaKnown RBP22.8■■□□□ 1.24
TNFRSF1B-204ENST00000536782 PNMA6FA0A0J9YX94 578 aa22.8■■□□□ 1.24
TNFRSF1B-204ENST00000536782 HAS3O00219 553 aa22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms