RNA–Protein interactions for RNA: ENST00000536548.5

CPSF7-216, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-216ENST00000536548 ITIH3Q06033 890 aa8.67□□□□□ -1.02
CPSF7-216ENST00000536548 DPYDQ12882 1025 aa8.67□□□□□ -1.02
CPSF7-216ENST00000536548 PAK1Q13153 545 aa8.67□□□□□ -1.02
CPSF7-216ENST00000536548 WTAPQ15007 396 aa8.67□□□□□ -1.02
CPSF7-216ENST00000536548 KRT31Q15323 416 aa8.67□□□□□ -1.02
CPSF7-216ENST00000536548 SF3B3Q15393 1217 aaKnown RBP8.67□□□□□ -1.02
CPSF7-216ENST00000536548 MICALCLQ6ZW33 695 aa8.67□□□□□ -1.02
CPSF7-216ENST00000536548 PODNQ7Z5L7 613 aa8.67□□□□□ -1.02
CPSF7-216ENST00000536548 KIAA1328Q86T90 577 aa8.67□□□□□ -1.02
CPSF7-216ENST00000536548 KIAA0825Q8IV33 1275 aa8.67□□□□□ -1.02
CPSF7-216ENST00000536548 MICALL1Q8N3F8 863 aa8.67□□□□□ -1.02
CPSF7-216ENST00000536548 NOA1Q8NC60 698 aaKnown RBP8.67□□□□□ -1.02
CPSF7-216ENST00000536548 OR8K1Q8NGG5 319 aa8.67□□□□□ -1.02
CPSF7-216ENST00000536548 MAFAQ8NHW3 353 aaPredicted RBP8.67□□□□□ -1.02
CPSF7-216ENST00000536548 CAGE1Q8TC20 777 aa8.67□□□□□ -1.02
CPSF7-216ENST00000536548 RAET1EQ8TD07 263 aa8.67□□□□□ -1.02
CPSF7-216ENST00000536548 DIS3LQ8TF46 1054 aaKnown RBP8.67□□□□□ -1.02
CPSF7-216ENST00000536548 MED15Q96RN5 788 aa8.67□□□□□ -1.02
CPSF7-216ENST00000536548 SLF1Q9BQI6 1058 aa8.67□□□□□ -1.02
CPSF7-216ENST00000536548 PLA2G12BQ9BX93 195 aa8.67□□□□□ -1.02
CPSF7-216ENST00000536548 NBPF3Q9H094 633 aa8.67□□□□□ -1.02
CPSF7-216ENST00000536548 NAPBQ9H115 298 aa8.67□□□□□ -1.02
CPSF7-216ENST00000536548 RNF41Q9H4P4 317 aaPredicted RBP8.67□□□□□ -1.02
CPSF7-216ENST00000536548 FAM217BQ9NTX9 383 aaPredicted RBP8.67□□□□□ -1.02
CPSF7-216ENST00000536548 GOLGA6AQ9NYA3 693 aa8.67□□□□□ -1.02
CPSF7-216ENST00000536548 SRRDQ9UH36 339 aa8.67□□□□□ -1.02
CPSF7-216ENST00000536548 FAM184BQ9ULE4 1060 aa8.67□□□□□ -1.02
CPSF7-216ENST00000536548 CTNND2Q9UQB3 1225 aa8.67□□□□□ -1.02
CPSF7-216ENST00000536548 GOLGA6BA6NDN3 693 aa8.66□□□□□ -1.02
CPSF7-216ENST00000536548 KCNJ18B7U540 433 aa8.66□□□□□ -1.02
CPSF7-216ENST00000536548 PATL2C9JE40 543 aaKnown RBP8.66□□□□□ -1.02
CPSF7-216ENST00000536548 TNFRSF10AO00220 468 aa8.66□□□□□ -1.02
CPSF7-216ENST00000536548 GNRH1P01148 92 aa8.66□□□□□ -1.02
CPSF7-216ENST00000536548 ADORA1P30542 326 aa8.66□□□□□ -1.02
CPSF7-216ENST00000536548 KRT2P35908 639 aa8.66□□□□□ -1.02
CPSF7-216ENST00000536548 PRMT2P55345 433 aa8.66□□□□□ -1.02
CPSF7-216ENST00000536548 STX17P56962 302 aa8.66□□□□□ -1.02
CPSF7-216ENST00000536548 MAP3K12Q12852 859 aa8.66□□□□□ -1.02
CPSF7-216ENST00000536548 IFIT5Q13325 482 aaKnown RBP8.66□□□□□ -1.02
CPSF7-216ENST00000536548 KCNJ12Q14500 433 aa8.66□□□□□ -1.02
CPSF7-216ENST00000536548 SPECC1Q5M775 1068 aa8.66□□□□□ -1.02
CPSF7-216ENST00000536548 RRAGBQ5VZM2 374 aa8.66□□□□□ -1.02
CPSF7-216ENST00000536548 ALS2CLQ60I27 953 aa8.66□□□□□ -1.02
CPSF7-216ENST00000536548 FOXR1Q6PIV2 292 aa8.66□□□□□ -1.02
CPSF7-216ENST00000536548 CCNI2Q6ZMN8 369 aaPredicted RBP8.66□□□□□ -1.02
CPSF7-216ENST00000536548 GRAMD1CQ8IYS0 662 aa8.66□□□□□ -1.02
CPSF7-216ENST00000536548 CCDC170Q8IYT3 715 aa8.66□□□□□ -1.02
CPSF7-216ENST00000536548 ANKRD13AQ8IZ07 590 aa8.66□□□□□ -1.02
CPSF7-216ENST00000536548 CRACR2BQ8N4Y2 399 aaPredicted RBP8.66□□□□□ -1.02
CPSF7-216ENST00000536548 RETREG2Q8NC44 543 aa8.66□□□□□ -1.02
CPSF7-216ENST00000536548 SYMPKQ92797 1274 aaKnown RBP8.66□□□□□ -1.02
CPSF7-216ENST00000536548 JAKMIP2Q96AA8 810 aa8.66□□□□□ -1.02
CPSF7-216ENST00000536548 ZBED3Q96IU2 234 aaPredicted RBP8.66□□□□□ -1.02
CPSF7-216ENST00000536548 ZNF594Q96JF6 807 aaPredicted RBP8.66□□□□□ -1.02
CPSF7-216ENST00000536548 DEFB118Q96PH6 123 aa8.66□□□□□ -1.02
CPSF7-216ENST00000536548 RUFY1Q96T51 708 aa8.66□□□□□ -1.02
CPSF7-216ENST00000536548 CAPS2Q9BXY5 557 aa8.66□□□□□ -1.02
CPSF7-216ENST00000536548 RNF26Q9BY78 433 aaPredicted RBP8.66□□□□□ -1.02
CPSF7-216ENST00000536548 NACAP1Q9BZK3 213 aa8.66□□□□□ -1.02
CPSF7-216ENST00000536548 UBE2OQ9C0C9 1292 aaKnown RBP8.66□□□□□ -1.02
CPSF7-216ENST00000536548 SUGCTQ9HAC7 445 aa8.66□□□□□ -1.02
CPSF7-216ENST00000536548 MAGEC2Q9UBF1 373 aaPredicted RBP8.66□□□□□ -1.02
CPSF7-216ENST00000536548 GUCA1BQ9UMX6 200 aa8.66□□□□□ -1.02
CPSF7-216ENST00000536548 LUC7L2Q9Y383 392 aaKnown RBP8.66□□□□□ -1.02
CPSF7-216ENST00000536548 PCDHB6Q9Y5E3 794 aa8.66□□□□□ -1.02
CPSF7-216ENST00000536548 REV3LO60673 3130 aa8.66□□□□□ -1.02
CPSF7-216ENST00000536548 BDP1A6H8Y1 2624 aa8.66□□□□□ -1.02
CPSF7-216ENST00000536548 MYPNQ86TC9 1320 aa8.65□□□□□ -1.02
CPSF7-216ENST00000536548 CLRN2A0PK11 232 aa8.65□□□□□ -1.02
CPSF7-216ENST00000536548 HSF2BPO75031 334 aa8.65□□□□□ -1.02
CPSF7-216ENST00000536548 KIAA0754O94854 1291 aa8.65□□□□□ -1.02
CPSF7-216ENST00000536548 EPB41P11171 864 aaKnown RBP8.65□□□□□ -1.02
CPSF7-216ENST00000536548 CD44P16070 742 aaKnown RBP8.65□□□□□ -1.02
CPSF7-216ENST00000536548 RXRAP19793 462 aa8.65□□□□□ -1.02
CPSF7-216ENST00000536548 EEF1GP26641 437 aaKnown RBP8.65□□□□□ -1.02
CPSF7-216ENST00000536548 INPP5BP32019 993 aa8.65□□□□□ -1.02
CPSF7-216ENST00000536548 PPP1R2P41236 205 aa8.65□□□□□ -1.02
CPSF7-216ENST00000536548 AFMP43652 599 aa8.65□□□□□ -1.02
CPSF7-216ENST00000536548 IREB2P48200 963 aaKnown RBP8.65□□□□□ -1.02
CPSF7-216ENST00000536548 TRIM28Q13263 835 aaKnown RBP8.65□□□□□ -1.02
CPSF7-216ENST00000536548 NNTQ13423 1086 aa8.65□□□□□ -1.02
CPSF7-216ENST00000536548 TCP11X2Q5H9J9 407 aa8.65□□□□□ -1.02
CPSF7-216ENST00000536548 METTL24Q5JXM2 366 aa8.65□□□□□ -1.02
CPSF7-216ENST00000536548 CCDC122Q5T0U0 273 aa8.65□□□□□ -1.02
CPSF7-216ENST00000536548 AKNAD1Q5T1N1 836 aa8.65□□□□□ -1.02
CPSF7-216ENST00000536548 ZNF658Q5TYW1 1059 aaPredicted RBP8.65□□□□□ -1.02
CPSF7-216ENST00000536548 WWC2Q6AWC2 1192 aa8.65□□□□□ -1.02
CPSF7-216ENST00000536548 NCAPH2Q6IBW4 605 aa8.65□□□□□ -1.02
CPSF7-216ENST00000536548 MFSD6Q6ZSS7 791 aa8.65□□□□□ -1.02
CPSF7-216ENST00000536548 MMGT1Q8N4V1 131 aa8.65□□□□□ -1.02
CPSF7-216ENST00000536548 STAG1Q8WVM7 1258 aa8.65□□□□□ -1.02
CPSF7-216ENST00000536548 DRC1Q96MC2 740 aa8.65□□□□□ -1.02
CPSF7-216ENST00000536548 DNAJC7Q99615 494 aa8.65□□□□□ -1.02
CPSF7-216ENST00000536548 CDX2Q99626 313 aaPredicted RBP8.65□□□□□ -1.02
CPSF7-216ENST00000536548 ISCA1Q9BUE6 129 aa8.65□□□□□ -1.02
CPSF7-216ENST00000536548 SELENOOQ9BVL4 669 aa8.65□□□□□ -1.02
CPSF7-216ENST00000536548 PUS3Q9BZE2 481 aaKnown RBP8.65□□□□□ -1.02
CPSF7-216ENST00000536548 TAB2Q9NYJ8 693 aa8.65□□□□□ -1.02
CPSF7-216ENST00000536548 CPA4Q9UI42 421 aa8.65□□□□□ -1.02
CPSF7-216ENST00000536548 KCNJ14Q9UNX9 436 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms