RNA–Protein interactions for RNA: ENST00000536241.1

CDCA3-206, Transcript of cell division cycle associated 3, humanhuman

TSL 5

Gene CDCA3, Length 1,490 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-206ENST00000536241 CEP131Q9UPN4 1083 aa13.08□□□□□ -0.32
CDCA3-206ENST00000536241 FRMPD4Q14CM0 1322 aa13.08□□□□□ -0.32
CDCA3-206ENST00000536241 MYH15Q9Y2K3 1946 aa13.07□□□□□ -0.32
CDCA3-206ENST00000536241 GCFC2P16383 781 aaKnown RBP13.07□□□□□ -0.32
CDCA3-206ENST00000536241 ITGB5P18084 799 aa13.07□□□□□ -0.32
CDCA3-206ENST00000536241 CCND2P30279 289 aa13.07□□□□□ -0.32
CDCA3-206ENST00000536241 FCGRTP55899 365 aa13.07□□□□□ -0.32
CDCA3-206ENST00000536241 CAP1Q01518 475 aa13.07□□□□□ -0.32
CDCA3-206ENST00000536241 MAP2K5Q13163 448 aa13.07□□□□□ -0.32
CDCA3-206ENST00000536241 CEP55Q53EZ4 464 aa13.07□□□□□ -0.32
CDCA3-206ENST00000536241 PLA2G4DQ86XP0 818 aa13.07□□□□□ -0.32
CDCA3-206ENST00000536241 POTEDQ86YR6 584 aa13.07□□□□□ -0.32
CDCA3-206ENST00000536241 NPLOC4Q8TAT6 608 aa13.07□□□□□ -0.32
CDCA3-206ENST00000536241 TRIM47Q96LD4 638 aa13.07□□□□□ -0.32
CDCA3-206ENST00000536241 MBOAT7Q96N66 472 aa13.07□□□□□ -0.32
CDCA3-206ENST00000536241 NAP1L4Q99733 375 aaKnown RBP13.07□□□□□ -0.32
CDCA3-206ENST00000536241 NUDT12Q9BQG2 462 aa13.07□□□□□ -0.32
CDCA3-206ENST00000536241 BEGAINQ9BUH8 593 aa13.07□□□□□ -0.32
CDCA3-206ENST00000536241 WDR11Q9BZH6 1224 aa13.07□□□□□ -0.32
CDCA3-206ENST00000536241 TSKSQ9UJT2 592 aa13.07□□□□□ -0.32
CDCA3-206ENST00000536241 UBIAD1Q9Y5Z9 338 aa13.07□□□□□ -0.32
CDCA3-206ENST00000536241 IGLV3-22A0A075B6J6 115 aa13.06□□□□□ -0.32
CDCA3-206ENST00000536241 MEIS1O00470 390 aa13.06□□□□□ -0.32
CDCA3-206ENST00000536241 NEMFO60524 1076 aa13.06□□□□□ -0.32
CDCA3-206ENST00000536241 BMP15O95972 392 aa13.06□□□□□ -0.32
CDCA3-206ENST00000536241 ARP10275 920 aa13.06□□□□□ -0.32
CDCA3-206ENST00000536241 MCM4P33991 863 aa13.06□□□□□ -0.32
CDCA3-206ENST00000536241 ATP2C1P98194 919 aaPredicted RBP13.06□□□□□ -0.32
CDCA3-206ENST00000536241 KIF22Q14807 665 aa13.06□□□□□ -0.32
CDCA3-206ENST00000536241 STXBP2Q15833 593 aa13.06□□□□□ -0.32
CDCA3-206ENST00000536241 Q4G0T1 1027 aa13.06□□□□□ -0.32
CDCA3-206ENST00000536241 XRRA1Q6P2D8 792 aa13.06□□□□□ -0.32
CDCA3-206ENST00000536241 USP6NLQ92738 828 aa13.06□□□□□ -0.32
CDCA3-206ENST00000536241 GJA10Q969M2 543 aa13.06□□□□□ -0.32
CDCA3-206ENST00000536241 SAGE1Q9NXZ1 904 aa13.06□□□□□ -0.32
CDCA3-206ENST00000536241 PCDHA7Q9UN72 937 aa13.06□□□□□ -0.32
CDCA3-206ENST00000536241 DIS3Q9Y2L1 958 aaKnown RBP13.06□□□□□ -0.32
CDCA3-206ENST00000536241 LCTP09848 1927 aa13.06□□□□□ -0.32
CDCA3-206ENST00000536241 RBBP6Q7Z6E9 1792 aaKnown RBP13.06□□□□□ -0.32
CDCA3-206ENST00000536241 B4DLN1 442 aa13.05□□□□□ -0.32
CDCA3-206ENST00000536241 MARCH6O60337 910 aa13.05□□□□□ -0.32
CDCA3-206ENST00000536241 PPP6R2O75170 966 aa13.05□□□□□ -0.32
CDCA3-206ENST00000536241 EIF3JO75822 258 aaKnown RBP13.05□□□□□ -0.32
CDCA3-206ENST00000536241 CYP2B6P20813 491 aa13.05□□□□□ -0.32
CDCA3-206ENST00000536241 EDNRBP24530 442 aa13.05□□□□□ -0.32
CDCA3-206ENST00000536241 TXKP42681 527 aa13.05□□□□□ -0.32
CDCA3-206ENST00000536241 ME1P48163 572 aa13.05□□□□□ -0.32
CDCA3-206ENST00000536241 GRIN1Q05586 938 aa13.05□□□□□ -0.32
CDCA3-206ENST00000536241 PDE4DQ08499 809 aa13.05□□□□□ -0.32
CDCA3-206ENST00000536241 ORC2Q13416 577 aaPredicted RBP13.05□□□□□ -0.32
CDCA3-206ENST00000536241 IL17AQ16552 155 aa13.05□□□□□ -0.32
CDCA3-206ENST00000536241 CALCRLQ16602 461 aa13.05□□□□□ -0.32
CDCA3-206ENST00000536241 EEPD1Q7L9B9 569 aa13.05□□□□□ -0.32
CDCA3-206ENST00000536241 CD99L2Q8TCZ2 262 aa13.05□□□□□ -0.32
CDCA3-206ENST00000536241 KCNG4Q8TDN1 519 aa13.05□□□□□ -0.32
CDCA3-206ENST00000536241 HAS1Q92839 578 aa13.05□□□□□ -0.32
CDCA3-206ENST00000536241 LENG9Q96B70 501 aa13.05□□□□□ -0.32
CDCA3-206ENST00000536241 CLIC6Q96NY7 704 aa13.05□□□□□ -0.32
CDCA3-206ENST00000536241 MTMR9Q96QG7 549 aa13.05□□□□□ -0.32
CDCA3-206ENST00000536241 JADE2Q9NQC1 790 aa13.05□□□□□ -0.32
CDCA3-206ENST00000536241 WBP1LQ9NX94 342 aa13.05□□□□□ -0.32
CDCA3-206ENST00000536241 SLC5A4Q9NY91 659 aa13.05□□□□□ -0.32
CDCA3-206ENST00000536241 GABRQQ9UN88 632 aa13.05□□□□□ -0.32
CDCA3-206ENST00000536241 PLXNB2O15031 1838 aa13.05□□□□□ -0.32
CDCA3-206ENST00000536241 ASB14A6NK59 587 aa13.04□□□□□ -0.32
CDCA3-206ENST00000536241 GOLGA6L22H0YM25 854 aa13.04□□□□□ -0.32
CDCA3-206ENST00000536241 MSH4O15457 936 aa13.04□□□□□ -0.32
CDCA3-206ENST00000536241 FKTNO75072 461 aa13.04□□□□□ -0.32
CDCA3-206ENST00000536241 GADD45BO75293 160 aaPredicted RBP13.04□□□□□ -0.32
CDCA3-206ENST00000536241 RGS20O76081 388 aa13.04□□□□□ -0.32
CDCA3-206ENST00000536241 OR52Z1P0C646 297 aa13.04□□□□□ -0.32
CDCA3-206ENST00000536241 NFKBIBQ15653 356 aa13.04□□□□□ -0.32
CDCA3-206ENST00000536241 CSPP1Q1MSJ5 1256 aa13.04□□□□□ -0.32
CDCA3-206ENST00000536241 SEPT14Q6ZU15 432 aa13.04□□□□□ -0.32
CDCA3-206ENST00000536241 TMEM87AQ8NBN3 555 aa13.04□□□□□ -0.32
CDCA3-206ENST00000536241 ZNF296Q8WUU4 475 aaPredicted RBP13.04□□□□□ -0.32
CDCA3-206ENST00000536241 MAML3Q96JK9 1138 aa13.04□□□□□ -0.32
CDCA3-206ENST00000536241 MPHOSPH6Q99547 160 aaKnown RBP13.04□□□□□ -0.32
CDCA3-206ENST00000536241 KCNMB3Q9NPA1 279 aa13.04□□□□□ -0.32
CDCA3-206ENST00000536241 KCNH7Q9NS40 1196 aa13.04□□□□□ -0.32
CDCA3-206ENST00000536241 LMBRD1Q9NUN5 540 aa13.04□□□□□ -0.32
CDCA3-206ENST00000536241 FBXO2Q9UK22 296 aaPredicted RBP13.04□□□□□ -0.32
CDCA3-206ENST00000536241 SRPRBQ9Y5M8 271 aaKnown RBP13.04□□□□□ -0.32
CDCA3-206ENST00000536241 VWA3AA6NCI4 1184 aa13.04□□□□□ -0.32
CDCA3-206ENST00000536241 LAD1O00515 517 aa13.04□□□□□ -0.32
CDCA3-206ENST00000536241 STAM2O75886 525 aa13.04□□□□□ -0.32
CDCA3-206ENST00000536241 SNAI1O95863 264 aaPredicted RBP13.04□□□□□ -0.32
CDCA3-206ENST00000536241 HOXC6P09630 235 aa13.04□□□□□ -0.32
CDCA3-206ENST00000536241 RGS2P41220 211 aa13.04□□□□□ -0.32
CDCA3-206ENST00000536241 TECP42680 631 aa13.04□□□□□ -0.32
CDCA3-206ENST00000536241 FLT3LGP49771 235 aa13.04□□□□□ -0.32
CDCA3-206ENST00000536241 CCL14Q16627 93 aa13.04□□□□□ -0.32
CDCA3-206ENST00000536241 SPECC1Q5M775 1068 aa13.04□□□□□ -0.32
CDCA3-206ENST00000536241 ARL6IP4Q66PJ3 421 aaKnown RBP13.04□□□□□ -0.32
CDCA3-206ENST00000536241 DTHD1Q6ZMT9 781 aa13.04□□□□□ -0.32
CDCA3-206ENST00000536241 ARMCX2Q7L311 632 aa13.04□□□□□ -0.32
CDCA3-206ENST00000536241 NIPA1Q7RTP0 329 aa13.04□□□□□ -0.32
CDCA3-206ENST00000536241 ZNF467Q7Z7K2 595 aaPredicted RBP13.04□□□□□ -0.32
CDCA3-206ENST00000536241 NLRX1Q86UT6 975 aa13.04□□□□□ -0.32
CDCA3-206ENST00000536241 JMYQ8N9B5 988 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms