RNA–Protein interactions for RNA: ENST00000535897.1

CHFR-211, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-211ENST00000535897 NBNO60934 754 aa9.41□□□□□ -0.9
CHFR-211ENST00000535897 EFCAB14O75071 495 aa9.41□□□□□ -0.9
CHFR-211ENST00000535897 FGAP02671 866 aa9.41□□□□□ -0.9
CHFR-211ENST00000535897 FGRP09769 529 aa9.41□□□□□ -0.9
CHFR-211ENST00000535897 ZNF286BP0CG31 522 aa9.41□□□□□ -0.9
CHFR-211ENST00000535897 PSEN2P49810 448 aa9.41□□□□□ -0.9
CHFR-211ENST00000535897 ARHGAP1Q07960 439 aa9.41□□□□□ -0.9
CHFR-211ENST00000535897 STXBP2Q15833 593 aa9.41□□□□□ -0.9
CHFR-211ENST00000535897 CDC37Q16543 378 aaPredicted RBP9.41□□□□□ -0.9
CHFR-211ENST00000535897 CSPP1Q1MSJ5 1256 aa9.41□□□□□ -0.9
CHFR-211ENST00000535897 GPATCH4Q5T3I0 446 aaKnown RBP9.41□□□□□ -0.9
CHFR-211ENST00000535897 ARHGEF16Q5VV41 709 aa9.41□□□□□ -0.9
CHFR-211ENST00000535897 CCDC62Q6P9F0 684 aa9.41□□□□□ -0.9
CHFR-211ENST00000535897 EP400NLQ6ZTU2 488 aa9.41□□□□□ -0.9
CHFR-211ENST00000535897 SESTD1Q86VW0 696 aa9.41□□□□□ -0.9
CHFR-211ENST00000535897 DHX37Q8IY37 1157 aaKnown RBP9.41□□□□□ -0.9
CHFR-211ENST00000535897 GJD3Q8N144 294 aa9.41□□□□□ -0.9
CHFR-211ENST00000535897 FBXO22Q8NEZ5 403 aa9.41□□□□□ -0.9
CHFR-211ENST00000535897 NSUN6Q8TEA1 469 aaKnown RBP9.41□□□□□ -0.9
CHFR-211ENST00000535897 DHX38Q92620 1227 aaKnown RBP9.41□□□□□ -0.9
CHFR-211ENST00000535897 TTC14Q96N46 770 aa9.41□□□□□ -0.9
CHFR-211ENST00000535897 RMDN3Q96TC7 470 aa9.41□□□□□ -0.9
CHFR-211ENST00000535897 ZKSCAN3Q9BRR0 538 aa9.41□□□□□ -0.9
CHFR-211ENST00000535897 KATNAL1Q9BW62 490 aa9.41□□□□□ -0.9
CHFR-211ENST00000535897 UBA5Q9GZZ9 404 aa9.41□□□□□ -0.9
CHFR-211ENST00000535897 TCP11L1Q9NUJ3 509 aa9.41□□□□□ -0.9
CHFR-211ENST00000535897 HDAC6Q9UBN7 1215 aa9.41□□□□□ -0.9
CHFR-211ENST00000535897 GTF2IRD1Q9UHL9 959 aa9.41□□□□□ -0.9
CHFR-211ENST00000535897 MRVI1Q9Y6F6 885 aa9.41□□□□□ -0.9
CHFR-211ENST00000535897 KIAA1217Q5T5P2 1943 aa9.41□□□□□ -0.9
CHFR-211ENST00000535897 ABCB11O95342 1321 aa9.4□□□□□ -0.9
CHFR-211ENST00000535897 A0A0D9SFI3 127 aa9.4□□□□□ -0.9
CHFR-211ENST00000535897 PI4K2BG5E9Z4 385 aa9.4□□□□□ -0.9
CHFR-211ENST00000535897 SORBS3O60504 671 aa9.4□□□□□ -0.9
CHFR-211ENST00000535897 CXCL10P02778 98 aa9.4□□□□□ -0.9
CHFR-211ENST00000535897 AMHP03971 560 aa9.4□□□□□ -0.9
CHFR-211ENST00000535897 EIF2AK2P19525 551 aaKnown RBP9.4□□□□□ -0.9
CHFR-211ENST00000535897 ERVK-21P61565 698 aa9.4□□□□□ -0.9
CHFR-211ENST00000535897 MFSD10Q14728 455 aa9.4□□□□□ -0.9
CHFR-211ENST00000535897 GPNMBQ14956 572 aa9.4□□□□□ -0.9
CHFR-211ENST00000535897 ALX1Q15699 326 aa9.4□□□□□ -0.9
CHFR-211ENST00000535897 KIAA0753Q2KHM9 967 aa9.4□□□□□ -0.9
CHFR-211ENST00000535897 TCTN1Q2MV58 587 aa9.4□□□□□ -0.9
CHFR-211ENST00000535897 MCMDC2Q4G0Z9 681 aa9.4□□□□□ -0.9
CHFR-211ENST00000535897 PTCRAQ6ISU1 281 aaPredicted RBP9.4□□□□□ -0.9
CHFR-211ENST00000535897 MCF2L2Q86YR7 1114 aa9.4□□□□□ -0.9
CHFR-211ENST00000535897 RGS22Q8NE09 1264 aa9.4□□□□□ -0.9
CHFR-211ENST00000535897 SYTL5Q8TDW5 730 aaPredicted RBP9.4□□□□□ -0.9
CHFR-211ENST00000535897 TBC1D5Q92609 795 aa9.4□□□□□ -0.9
CHFR-211ENST00000535897 ESR2Q92731 530 aa9.4□□□□□ -0.9
CHFR-211ENST00000535897 KAT2BQ92831 832 aa9.4□□□□□ -0.9
CHFR-211ENST00000535897 FAM227BQ96M60 508 aa9.4□□□□□ -0.9
CHFR-211ENST00000535897 TAAR1Q96RJ0 339 aa9.4□□□□□ -0.9
CHFR-211ENST00000535897 CTAGE1Q96RT6 745 aa9.4□□□□□ -0.9
CHFR-211ENST00000535897 C17orf80Q9BSJ5 609 aa9.4□□□□□ -0.9
CHFR-211ENST00000535897 CD320Q9NPF0 282 aa9.4□□□□□ -0.9
CHFR-211ENST00000535897 C11orf16Q9NQ32 467 aa9.4□□□□□ -0.9
CHFR-211ENST00000535897 INSL6Q9Y581 213 aa9.4□□□□□ -0.9
CHFR-211ENST00000535897 MYH6P13533 1939 aa9.4□□□□□ -0.9
CHFR-211ENST00000535897 EMSYQ7Z589 1322 aa9.39□□□□□ -0.91
CHFR-211ENST00000535897 RBAK-RBAKDNI3L0D1 243 aa9.39□□□□□ -0.91
CHFR-211ENST00000535897 LGR5O75473 907 aa9.39□□□□□ -0.91
CHFR-211ENST00000535897 CFBP00751 764 aa9.39□□□□□ -0.91
CHFR-211ENST00000535897 SNHG28P0DPA3 235 aa9.39□□□□□ -0.91
CHFR-211ENST00000535897 HSPD1P10809 573 aaKnown RBP9.39□□□□□ -0.91
CHFR-211ENST00000535897 IL9P15248 144 aa9.39□□□□□ -0.91
CHFR-211ENST00000535897 THPOP40225 353 aa9.39□□□□□ -0.91
CHFR-211ENST00000535897 RBL2Q08999 1139 aa9.39□□□□□ -0.91
CHFR-211ENST00000535897 PTK7Q13308 1070 aa9.39□□□□□ -0.91
CHFR-211ENST00000535897 LAMC2Q13753 1193 aa9.39□□□□□ -0.91
CHFR-211ENST00000535897 LEXMQ3ZCV2 418 aa9.39□□□□□ -0.91
CHFR-211ENST00000535897 ZNF618Q5T7W0 954 aa9.39□□□□□ -0.91
CHFR-211ENST00000535897 ANKRD45Q5TZF3 282 aa9.39□□□□□ -0.91
CHFR-211ENST00000535897 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.39□□□□□ -0.91
CHFR-211ENST00000535897 FAM178BQ8IXR5 827 aa9.39□□□□□ -0.91
CHFR-211ENST00000535897 MYOCDQ8IZQ8 938 aa9.39□□□□□ -0.91
CHFR-211ENST00000535897 PNMA1Q8ND90 353 aa9.39□□□□□ -0.91
CHFR-211ENST00000535897 IWS1Q96ST2 819 aa9.39□□□□□ -0.91
CHFR-211ENST00000535897 RNF41Q9H4P4 317 aaPredicted RBP9.39□□□□□ -0.91
CHFR-211ENST00000535897 KAT14Q9H8E8 782 aa9.39□□□□□ -0.91
CHFR-211ENST00000535897 VAT1LQ9HCJ6 419 aa9.39□□□□□ -0.91
CHFR-211ENST00000535897 COL20A1Q9P218 1284 aa9.39□□□□□ -0.91
CHFR-211ENST00000535897 DDX41Q9UJV9 622 aaKnown RBP9.39□□□□□ -0.91
CHFR-211ENST00000535897 PCDHB15Q9Y5E8 787 aa9.39□□□□□ -0.91
CHFR-211ENST00000535897 MYH7BA7E2Y1 1941 aa9.39□□□□□ -0.91
CHFR-211ENST00000535897 ZMYM6O95789 1325 aa9.38□□□□□ -0.91
CHFR-211ENST00000535897 NEDD4P46934 1319 aa9.38□□□□□ -0.91
CHFR-211ENST00000535897 CCDC171Q6TFL3 1326 aa9.38□□□□□ -0.91
CHFR-211ENST00000535897 PRR33A8MZF0 331 aa9.38□□□□□ -0.91
CHFR-211ENST00000535897 TRIM6-TRIM34B2RNG4 842 aa9.38□□□□□ -0.91
CHFR-211ENST00000535897 H3BQ06 376 aaPredicted RBP9.38□□□□□ -0.91
CHFR-211ENST00000535897 EIF3JO75822 258 aaKnown RBP9.38□□□□□ -0.91
CHFR-211ENST00000535897 F2P00734 622 aa9.38□□□□□ -0.91
CHFR-211ENST00000535897 PCP11498 1178 aaKnown RBP9.38□□□□□ -0.91
CHFR-211ENST00000535897 MYCLP12524 364 aaPredicted RBP9.38□□□□□ -0.91
CHFR-211ENST00000535897 ALADP13716 330 aa9.38□□□□□ -0.91
CHFR-211ENST00000535897 ZNF200P98182 395 aaPredicted RBP9.38□□□□□ -0.91
CHFR-211ENST00000535897 NMIQ13287 307 aaPredicted RBP9.38□□□□□ -0.91
CHFR-211ENST00000535897 MBTPS1Q14703 1052 aa9.38□□□□□ -0.91
CHFR-211ENST00000535897 PTPROQ16827 1216 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms