RNA–Protein interactions for RNA: ENST00000535685.1

CCDC60-202, Transcript of coiled-coil domain containing 60, humanhuman

TSL 3

Gene CCDC60, Length 446 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-202ENST00000535685 TBC1D5Q92609 795 aa12.56□□□□□ -0.4
CCDC60-202ENST00000535685 VTI1AQ96AJ9 217 aa12.56□□□□□ -0.4
CCDC60-202ENST00000535685 AMNQ9BXJ7 453 aa12.56□□□□□ -0.4
CCDC60-202ENST00000535685 LSG1Q9H089 658 aaKnown RBP12.56□□□□□ -0.4
CCDC60-202ENST00000535685 POLR3EQ9NVU0 708 aa12.56□□□□□ -0.4
CCDC60-202ENST00000535685 MTMR10Q9NXD2 777 aa12.56□□□□□ -0.4
CCDC60-202ENST00000535685 RBM8AQ9Y5S9 174 aaKnown RBP12.56□□□□□ -0.4
CCDC60-202ENST00000535685 TAF6LQ9Y6J9 622 aa12.56□□□□□ -0.4
CCDC60-202ENST00000535685 GRIN2DO15399 1336 aa12.56□□□□□ -0.4
CCDC60-202ENST00000535685 A6NJR5 290 aa12.55□□□□□ -0.4
CCDC60-202ENST00000535685 SMARCA1P28370 1054 aa12.55□□□□□ -0.4
CCDC60-202ENST00000535685 ANTXR2P58335 489 aa12.55□□□□□ -0.4
CCDC60-202ENST00000535685 FPGSQ05932 587 aa12.55□□□□□ -0.4
CCDC60-202ENST00000535685 WTAPQ15007 396 aa12.55□□□□□ -0.4
CCDC60-202ENST00000535685 PPP2R5BQ15173 497 aa12.55□□□□□ -0.4
CCDC60-202ENST00000535685 SLC35G1Q2M3R5 365 aa12.55□□□□□ -0.4
CCDC60-202ENST00000535685 BRDTQ58F21 947 aaPredicted RBP12.55□□□□□ -0.4
CCDC60-202ENST00000535685 DEFB123Q8N688 67 aa12.55□□□□□ -0.4
CCDC60-202ENST00000535685 ESYT1Q9BSJ8 1104 aa12.55□□□□□ -0.4
CCDC60-202ENST00000535685 COL20A1Q9P218 1284 aa12.55□□□□□ -0.4
CCDC60-202ENST00000535685 OPLAHO14841 1288 aa12.54□□□□□ -0.4
CCDC60-202ENST00000535685 PPP1R11O60927 126 aaPredicted RBP12.54□□□□□ -0.4
CCDC60-202ENST00000535685 EPHB4P54760 987 aa12.54□□□□□ -0.4
CCDC60-202ENST00000535685 PURAQ00577 322 aaKnown RBP12.54□□□□□ -0.4
CCDC60-202ENST00000535685 PPIGQ13427 754 aaKnown RBP eCLIP12.54□□□□□ -0.4
CCDC60-202ENST00000535685 TTLL4Q14679 1199 aa12.54□□□□□ -0.4
CCDC60-202ENST00000535685 NECTIN1Q15223 517 aa12.54□□□□□ -0.4
CCDC60-202ENST00000535685 TMTC2Q8N394 836 aa12.54□□□□□ -0.4
CCDC60-202ENST00000535685 TAAR1Q96RJ0 339 aa12.54□□□□□ -0.4
CCDC60-202ENST00000535685 RMDN3Q96TC7 470 aa12.54□□□□□ -0.4
CCDC60-202ENST00000535685 VAT1LQ9HCJ6 419 aa12.54□□□□□ -0.4
CCDC60-202ENST00000535685 CUL9Q8IWT3 2517 aa12.53□□□□□ -0.4
CCDC60-202ENST00000535685 TMEM265A0A087WTH1 108 aa12.53□□□□□ -0.4
CCDC60-202ENST00000535685 PNMA6FA0A0J9YX94 578 aa12.53□□□□□ -0.4
CCDC60-202ENST00000535685 CYTH3O43739 400 aa12.53□□□□□ -0.4
CCDC60-202ENST00000535685 DHX16O60231 1041 aaKnown RBP12.53□□□□□ -0.4
CCDC60-202ENST00000535685 EIF3JO75822 258 aaKnown RBP12.53□□□□□ -0.4
CCDC60-202ENST00000535685 TXNP10599 105 aaKnown RBP12.53□□□□□ -0.4
CCDC60-202ENST00000535685 C7P10643 843 aa12.53□□□□□ -0.4
CCDC60-202ENST00000535685 PTGS1P23219 599 aa12.53□□□□□ -0.4
CCDC60-202ENST00000535685 PTPN11Q06124 597 aaPredicted RBP12.53□□□□□ -0.4
CCDC60-202ENST00000535685 STXBP2Q15833 593 aa12.53□□□□□ -0.4
CCDC60-202ENST00000535685 TMEM67Q5HYA8 995 aa12.53□□□□□ -0.4
CCDC60-202ENST00000535685 RASIP1Q5U651 963 aa12.53□□□□□ -0.4
CCDC60-202ENST00000535685 CATIPQ7Z7H3 387 aa12.53□□□□□ -0.4
CCDC60-202ENST00000535685 TMEM199Q8N511 208 aa12.53□□□□□ -0.4
CCDC60-202ENST00000535685 KRI1Q8N9T8 703 aaKnown RBP12.53□□□□□ -0.4
CCDC60-202ENST00000535685 OR6J1Q8NGC5 347 aa12.53□□□□□ -0.4
CCDC60-202ENST00000535685 TMEM87BQ96K49 555 aa12.53□□□□□ -0.4
CCDC60-202ENST00000535685 MTG1Q9BT17 334 aaPredicted RBP12.53□□□□□ -0.4
CCDC60-202ENST00000535685 SENP2Q9HC62 589 aa12.53□□□□□ -0.4
CCDC60-202ENST00000535685 STXBP5LQ9Y2K9 1186 aa12.53□□□□□ -0.4
CCDC60-202ENST00000535685 PCDHA1Q9Y5I3 950 aa12.53□□□□□ -0.4
CCDC60-202ENST00000535685 TET1Q8NFU7 2136 aa12.52□□□□□ -0.4
CCDC60-202ENST00000535685 GRXCR2A6NFK2 248 aa12.52□□□□□ -0.41
CCDC60-202ENST00000535685 DDAH1O94760 285 aa12.52□□□□□ -0.41
CCDC60-202ENST00000535685 ARIH2O95376 493 aa12.52□□□□□ -0.41
CCDC60-202ENST00000535685 NR3C2P08235 984 aa12.52□□□□□ -0.41
CCDC60-202ENST00000535685 MCM5P33992 734 aa12.52□□□□□ -0.41
CCDC60-202ENST00000535685 LIFRP42702 1097 aa12.52□□□□□ -0.41
CCDC60-202ENST00000535685 NFRKBQ6P4R8 1299 aa12.52□□□□□ -0.41
CCDC60-202ENST00000535685 EMID1Q96A84 441 aaPredicted RBP12.52□□□□□ -0.41
CCDC60-202ENST00000535685 LZTS2Q9BRK4 669 aa12.52□□□□□ -0.41
CCDC60-202ENST00000535685 SPZ1Q9BXG8 430 aa12.52□□□□□ -0.41
CCDC60-202ENST00000535685 ALDH8A1Q9H2A2 487 aaPredicted RBP12.52□□□□□ -0.41
CCDC60-202ENST00000535685 LY9Q9HBG7 655 aa12.52□□□□□ -0.41
CCDC60-202ENST00000535685 PXMP2Q9NR77 195 aa12.52□□□□□ -0.41
CCDC60-202ENST00000535685 KAT6AQ92794 2004 aa12.52□□□□□ -0.41
CCDC60-202ENST00000535685 SLC27A2O14975 620 aa12.51□□□□□ -0.41
CCDC60-202ENST00000535685 B4GALT4O60513 344 aa12.51□□□□□ -0.41
CCDC60-202ENST00000535685 CFBP00751 764 aa12.51□□□□□ -0.41
CCDC60-202ENST00000535685 GH1P01241 217 aa12.51□□□□□ -0.41
CCDC60-202ENST00000535685 SUPT20HL2P0C7V6 817 aa12.51□□□□□ -0.41
CCDC60-202ENST00000535685 KIF5BP33176 963 aa12.51□□□□□ -0.41
CCDC60-202ENST00000535685 GNAQP50148 359 aa12.51□□□□□ -0.41
CCDC60-202ENST00000535685 TSGA10IPQ3SY00 556 aa12.51□□□□□ -0.41
CCDC60-202ENST00000535685 TMEM240Q5SV17 173 aa12.51□□□□□ -0.41
CCDC60-202ENST00000535685 ARHGEF16Q5VV41 709 aa12.51□□□□□ -0.41
CCDC60-202ENST00000535685 CREB3L3Q68CJ9 461 aa12.51□□□□□ -0.41
CCDC60-202ENST00000535685 KCNV1Q6PIU1 500 aa12.51□□□□□ -0.41
CCDC60-202ENST00000535685 Q7L0L9 218 aa12.51□□□□□ -0.41
CCDC60-202ENST00000535685 C16orf59Q7L2K0 433 aa12.51□□□□□ -0.41
CCDC60-202ENST00000535685 VSIG10LQ86VR7 867 aa12.51□□□□□ -0.41
CCDC60-202ENST00000535685 OXER1Q8TDS5 423 aa12.51□□□□□ -0.41
CCDC60-202ENST00000535685 RNPC3Q96LT9 517 aaKnown RBP12.51□□□□□ -0.41
CCDC60-202ENST00000535685 PIGSQ96S52 555 aa12.51□□□□□ -0.41
CCDC60-202ENST00000535685 PDCD2LQ9BRP1 358 aa12.51□□□□□ -0.41
CCDC60-202ENST00000535685 NOC4LQ9BVI4 516 aaKnown RBP12.51□□□□□ -0.41
CCDC60-202ENST00000535685 IL23AQ9NPF7 189 aa12.51□□□□□ -0.41
CCDC60-202ENST00000535685 DDX41Q9UJV9 622 aaKnown RBP12.51□□□□□ -0.41
CCDC60-202ENST00000535685 A0A0C4DFX4 3053 aa12.51□□□□□ -0.41
CCDC60-202ENST00000535685 SCN5AQ14524 2016 aa12.5□□□□□ -0.41
CCDC60-202ENST00000535685 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.5□□□□□ -0.41
CCDC60-202ENST00000535685 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.5□□□□□ -0.41
CCDC60-202ENST00000535685 GCOM1H8Y6P7 765 aaPredicted RBP12.5□□□□□ -0.41
CCDC60-202ENST00000535685 SH2B2O14492 632 aaPredicted RBP12.5□□□□□ -0.41
CCDC60-202ENST00000535685 PRC1O43663 620 aa12.5□□□□□ -0.41
CCDC60-202ENST00000535685 POLR2MP0CAP2 368 aa12.5□□□□□ -0.41
CCDC60-202ENST00000535685 TGFB3P10600 412 aa12.5□□□□□ -0.41
CCDC60-202ENST00000535685 HOXD8P13378 290 aaPredicted RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms