RNA–Protein interactions for RNA: ENST00000534765.1

SF3B2-216, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-216ENST00000534765 STK38Q15208 465 aa10.05□□□□□ -0.8
SF3B2-216ENST00000534765 BRAPQ7Z569 592 aa10.05□□□□□ -0.8
SF3B2-216ENST00000534765 CTAGE6Q86UF2 777 aa10.05□□□□□ -0.8
SF3B2-216ENST00000534765 CTAGE4Q8IX94 777 aa10.05□□□□□ -0.8
SF3B2-216ENST00000534765 TMTC2Q8N394 836 aa10.05□□□□□ -0.8
SF3B2-216ENST00000534765 RABGGTAQ92696 567 aa10.05□□□□□ -0.8
SF3B2-216ENST00000534765 STAMQ92783 540 aa10.05□□□□□ -0.8
SF3B2-216ENST00000534765 SAAL1Q96ER3 474 aa10.05□□□□□ -0.8
SF3B2-216ENST00000534765 CAPZA3Q96KX2 299 aa10.05□□□□□ -0.8
SF3B2-216ENST00000534765 PCDHA6Q9UN73 950 aa10.05□□□□□ -0.8
SF3B2-216ENST00000534765 PCDHA8Q9Y5H6 950 aa10.05□□□□□ -0.8
SF3B2-216ENST00000534765 ATAD5Q96QE3 1844 aa10.05□□□□□ -0.8
SF3B2-216ENST00000534765 PLIN4Q96Q06 1357 aa10.05□□□□□ -0.8
SF3B2-216ENST00000534765 CCDC151A5D8V7 595 aa10.04□□□□□ -0.8
SF3B2-216ENST00000534765 G3V3G9 751 aa10.04□□□□□ -0.8
SF3B2-216ENST00000534765 ZNF202O95125 648 aa10.04□□□□□ -0.8
SF3B2-216ENST00000534765 GNPTABQ3T906 1256 aa10.04□□□□□ -0.8
SF3B2-216ENST00000534765 DCAF8Q5TAQ9 597 aa10.04□□□□□ -0.8
SF3B2-216ENST00000534765 RSBN1LQ6PCB5 846 aaPredicted RBP10.04□□□□□ -0.8
SF3B2-216ENST00000534765 SYNE3Q6ZMZ3 975 aa10.04□□□□□ -0.8
SF3B2-216ENST00000534765 LARGE2Q8N3Y3 721 aa10.04□□□□□ -0.8
SF3B2-216ENST00000534765 IDI2Q9BXS1 227 aa10.04□□□□□ -0.8
SF3B2-216ENST00000534765 FAM53CQ9NYF3 392 aa10.04□□□□□ -0.8
SF3B2-216ENST00000534765 PSD3Q9NYI0 1048 aa10.04□□□□□ -0.8
SF3B2-216ENST00000534765 EME2A4GXA9 379 aaPredicted RBP10.04□□□□□ -0.8
SF3B2-216ENST00000534765 SNHG28P0DPA3 235 aa10.04□□□□□ -0.8
SF3B2-216ENST00000534765 MATR3P43243 847 aaKnown RBP eCLIP10.04□□□□□ -0.8
SF3B2-216ENST00000534765 IQCB1Q15051 598 aa10.04□□□□□ -0.8
SF3B2-216ENST00000534765 DHX40Q8IX18 779 aaKnown RBP10.04□□□□□ -0.8
SF3B2-216ENST00000534765 ACER1Q8TDN7 264 aa10.04□□□□□ -0.8
SF3B2-216ENST00000534765 WDR24Q96S15 920 aa10.04□□□□□ -0.8
SF3B2-216ENST00000534765 FOXP1Q9H334 677 aaPredicted RBP10.04□□□□□ -0.8
SF3B2-216ENST00000534765 L2HGDHQ9H9P8 463 aa10.04□□□□□ -0.8
SF3B2-216ENST00000534765 SBF1O95248 1867 aa10.04□□□□□ -0.8
SF3B2-216ENST00000534765 CDKL5O76039 1030 aa10.04□□□□□ -0.8
SF3B2-216ENST00000534765 EEF2P13639 858 aaKnown RBP10.04□□□□□ -0.8
SF3B2-216ENST00000534765 ERCC3P19447 782 aa10.04□□□□□ -0.8
SF3B2-216ENST00000534765 RESP18Q5W5W9 173 aa10.04□□□□□ -0.8
SF3B2-216ENST00000534765 TATDN1Q6P1N9 297 aa10.04□□□□□ -0.8
SF3B2-216ENST00000534765 SAMD7Q7Z3H4 446 aa10.04□□□□□ -0.8
SF3B2-216ENST00000534765 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.04□□□□□ -0.8
SF3B2-216ENST00000534765 ZNF541Q9H0D2 1346 aa10.04□□□□□ -0.8
SF3B2-216ENST00000534765 USP17L10C9JJH3 530 aa10.03□□□□□ -0.8
SF3B2-216ENST00000534765 YEATS4O95619 227 aa10.03□□□□□ -0.8
SF3B2-216ENST00000534765 PCP11498 1178 aaKnown RBP10.03□□□□□ -0.8
SF3B2-216ENST00000534765 IFT88Q13099 833 aa10.03□□□□□ -0.8
SF3B2-216ENST00000534765 SF3B2Q13435 895 aaKnown RBP10.03□□□□□ -0.8
SF3B2-216ENST00000534765 SLC30A10Q6XR72 485 aa10.03□□□□□ -0.8
SF3B2-216ENST00000534765 MICALCLQ6ZW33 695 aa10.03□□□□□ -0.8
SF3B2-216ENST00000534765 SPICE1Q8N0Z3 855 aa10.03□□□□□ -0.8
SF3B2-216ENST00000534765 SPDYE1Q8NFV5 336 aaPredicted RBP10.03□□□□□ -0.8
SF3B2-216ENST00000534765 IRX2Q9BZI1 471 aaPredicted RBP10.03□□□□□ -0.8
SF3B2-216ENST00000534765 TTC36A6NLP5 189 aa10.03□□□□□ -0.8
SF3B2-216ENST00000534765 WNT10BO00744 389 aa10.03□□□□□ -0.8
SF3B2-216ENST00000534765 RCAN1P53805 252 aa10.03□□□□□ -0.8
SF3B2-216ENST00000534765 ENOX2Q16206 610 aaKnown RBP10.03□□□□□ -0.8
SF3B2-216ENST00000534765 CCDC121Q6ZUS5 278 aa10.03□□□□□ -0.8
SF3B2-216ENST00000534765 HEATR3Q7Z4Q2 680 aa10.03□□□□□ -0.8
SF3B2-216ENST00000534765 ARL10Q8N8L6 244 aa10.03□□□□□ -0.8
SF3B2-216ENST00000534765 IGSF22Q8N9C0 903 aa10.03□□□□□ -0.8
SF3B2-216ENST00000534765 MRPS27Q92552 414 aaKnown RBP10.03□□□□□ -0.8
SF3B2-216ENST00000534765 JMJD4Q9H9V9 463 aa10.03□□□□□ -0.8
SF3B2-216ENST00000534765 SERPINA10Q9UK55 444 aa10.03□□□□□ -0.8
SF3B2-216ENST00000534765 TMCO5BA8MYB1 307 aa10.03□□□□□ -0.8
SF3B2-216ENST00000534765 CCDC93Q567U6 631 aa10.03□□□□□ -0.8
SF3B2-216ENST00000534765 PNMA8AQ86V59 439 aaPredicted RBP10.03□□□□□ -0.8
SF3B2-216ENST00000534765 CAPS2Q9BXY5 557 aa10.03□□□□□ -0.8
SF3B2-216ENST00000534765 SUGT1Q9Y2Z0 365 aa10.03□□□□□ -0.8
SF3B2-216ENST00000534765 STIM1Q13586 685 aa10.02□□□□□ -0.8
SF3B2-216ENST00000534765 SNCBQ16143 134 aa10.02□□□□□ -0.8
SF3B2-216ENST00000534765 UBE2SQ16763 222 aa10.02□□□□□ -0.8
SF3B2-216ENST00000534765 GSPT2Q8IYD1 628 aaKnown RBP10.02□□□□□ -0.8
SF3B2-216ENST00000534765 TRIM22Q8IYM9 498 aa10.02□□□□□ -0.8
SF3B2-216ENST00000534765 ADGRF4Q8IZF3 695 aa10.02□□□□□ -0.8
SF3B2-216ENST00000534765 CCDC148Q8NFR7 591 aa10.02□□□□□ -0.8
SF3B2-216ENST00000534765 ZBED3Q96IU2 234 aaPredicted RBP10.02□□□□□ -0.8
SF3B2-216ENST00000534765 ZNF70Q9UC06 446 aaPredicted RBP10.02□□□□□ -0.8
SF3B2-216ENST00000534765 KCTD16Q68DU8 428 aa10.02□□□□□ -0.81
SF3B2-216ENST00000534765 ZNF396Q96N95 335 aaPredicted RBP10.02□□□□□ -0.81
SF3B2-216ENST00000534765 ZCWPW1Q9H0M4 648 aa10.02□□□□□ -0.81
SF3B2-216ENST00000534765 TPX2Q9ULW0 747 aaKnown RBP10.02□□□□□ -0.81
SF3B2-216ENST00000534765 BCS1LQ9Y276 419 aa10.02□□□□□ -0.81
SF3B2-216ENST00000534765 PPP2R2CQ9Y2T4 447 aa10.02□□□□□ -0.81
SF3B2-216ENST00000534765 POTEB2H3BUK9 544 aa10.02□□□□□ -0.81
SF3B2-216ENST00000534765 OPLAHO14841 1288 aa10.02□□□□□ -0.81
SF3B2-216ENST00000534765 GH2P01242 217 aa10.02□□□□□ -0.81
SF3B2-216ENST00000534765 MYBL2P10244 700 aa10.02□□□□□ -0.81
SF3B2-216ENST00000534765 MCM7P33993 719 aa10.02□□□□□ -0.81
SF3B2-216ENST00000534765 ADKP55263 362 aaKnown RBP10.02□□□□□ -0.81
SF3B2-216ENST00000534765 RWDD2BP57060 319 aa10.02□□□□□ -0.81
SF3B2-216ENST00000534765 PTGDRQ13258 359 aa10.02□□□□□ -0.81
SF3B2-216ENST00000534765 INF2Q27J81 1249 aa10.02□□□□□ -0.81
SF3B2-216ENST00000534765 RBM26Q5T8P6 1007 aaKnown RBP10.02□□□□□ -0.81
SF3B2-216ENST00000534765 ARMCX5Q6P1M9 558 aa10.02□□□□□ -0.81
SF3B2-216ENST00000534765 A0A1W2PQ27 194 aa10.01□□□□□ -0.81
SF3B2-216ENST00000534765 A0A1W2PQ64 194 aa10.01□□□□□ -0.81
SF3B2-216ENST00000534765 A0A1W2PQD8 194 aa10.01□□□□□ -0.81
SF3B2-216ENST00000534765 CAVIN2O95810 425 aa10.01□□□□□ -0.81
SF3B2-216ENST00000534765 PTPREP23469 700 aa10.01□□□□□ -0.81
SF3B2-216ENST00000534765 KRT2P35908 639 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms